RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
CRAMP1-206ENST00000468839 TTC21AQ8NDW8 1320 aa20.1■□□□□ 0.81
CRAMP1-206ENST00000468839 MTHFSP49914 203 aa20.1■□□□□ 0.81
CRAMP1-206ENST00000468839 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
CRAMP1-206ENST00000468839 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
CRAMP1-206ENST00000468839 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
CRAMP1-206ENST00000468839 NGDNQ8NEJ9 315 aaKnown RBP20.09■□□□□ 0.81
CRAMP1-206ENST00000468839 DCCP43146 1447 aa20.09■□□□□ 0.81
CRAMP1-206ENST00000468839 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
CRAMP1-206ENST00000468839 NME9Q86XW9 330 aa20.08■□□□□ 0.81
CRAMP1-206ENST00000468839 PHF8Q9UPP1 1060 aa20.08■□□□□ 0.81
CRAMP1-206ENST00000468839 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
CRAMP1-206ENST00000468839 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
CRAMP1-206ENST00000468839 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
CRAMP1-206ENST00000468839 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
CRAMP1-206ENST00000468839 AATKQ6ZMQ8 1374 aa20.07■□□□□ 0.8
CRAMP1-206ENST00000468839 COG3Q96JB2 828 aa20.06■□□□□ 0.8
CRAMP1-206ENST00000468839 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
CRAMP1-206ENST00000468839 OVOS2A0A0J9YW53 1432 aa20.05■□□□□ 0.8
CRAMP1-206ENST00000468839 OVOS2Q6IE36 1432 aa20.05■□□□□ 0.8
CRAMP1-206ENST00000468839 PIK3C2AO00443 1686 aa20.05■□□□□ 0.8
CRAMP1-206ENST00000468839 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
CRAMP1-206ENST00000468839 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
CRAMP1-206ENST00000468839 ZRANB1Q9UGI0 708 aa20.04■□□□□ 0.8
CRAMP1-206ENST00000468839 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
CRAMP1-206ENST00000468839 COL3A1P02461 1466 aaPredicted RBP20.03■□□□□ 0.8
CRAMP1-206ENST00000468839 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
CRAMP1-206ENST00000468839 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
CRAMP1-206ENST00000468839 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.79
CRAMP1-206ENST00000468839 ESCO1Q5FWF5 840 aa20.01■□□□□ 0.79
CRAMP1-206ENST00000468839 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
CRAMP1-206ENST00000468839 MST1RQ04912 1400 aa20■□□□□ 0.79
CRAMP1-206ENST00000468839 ATF3P18847 181 aa19.99■□□□□ 0.79
CRAMP1-206ENST00000468839 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
CRAMP1-206ENST00000468839 TRPM3Q9HCF6 1732 aaPredicted RBP19.99■□□□□ 0.79
CRAMP1-206ENST00000468839 MSH6P52701 1360 aa19.98■□□□□ 0.79
CRAMP1-206ENST00000468839 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
CRAMP1-206ENST00000468839 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
CRAMP1-206ENST00000468839 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
CRAMP1-206ENST00000468839 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
CRAMP1-206ENST00000468839 PSME1Q06323 249 aa19.95■□□□□ 0.78
CRAMP1-206ENST00000468839 FBLN1P23142 703 aa19.94■□□□□ 0.78
CRAMP1-206ENST00000468839 NGEFQ8N5V2 710 aa19.94■□□□□ 0.78
CRAMP1-206ENST00000468839 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
CRAMP1-206ENST00000468839 NLRP6P59044 892 aa19.92■□□□□ 0.78
CRAMP1-206ENST00000468839 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
CRAMP1-206ENST00000468839 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
CRAMP1-206ENST00000468839 PEAK1Q9H792 1746 aa19.92■□□□□ 0.78
CRAMP1-206ENST00000468839 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
CRAMP1-206ENST00000468839 ABTB2Q8N961 1025 aa19.91■□□□□ 0.78
CRAMP1-206ENST00000468839 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
CRAMP1-206ENST00000468839 LTN1O94822 1766 aa19.9■□□□□ 0.78
CRAMP1-206ENST00000468839 FOXO3O43524 673 aa19.89■□□□□ 0.77
CRAMP1-206ENST00000468839 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.77
CRAMP1-206ENST00000468839 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CRAMP1-206ENST00000468839 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
CRAMP1-206ENST00000468839 KRT28Q7Z3Y7 464 aa19.89■□□□□ 0.77
CRAMP1-206ENST00000468839 U2AF1L5P0DN76 240 aaPredicted RBP19.88■□□□□ 0.77
CRAMP1-206ENST00000468839 U2AF1Q01081 240 aaKnown RBP eCLIP19.88■□□□□ 0.77
CRAMP1-206ENST00000468839 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
CRAMP1-206ENST00000468839 KIF24Q5T7B8 1368 aa19.87■□□□□ 0.77
CRAMP1-206ENST00000468839 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
CRAMP1-206ENST00000468839 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
CRAMP1-206ENST00000468839 APAF1O14727 1248 aa19.86■□□□□ 0.77
CRAMP1-206ENST00000468839 IL13P35225 146 aa19.86■□□□□ 0.77
CRAMP1-206ENST00000468839 PHRF1Q9P1Y6 1649 aaKnown RBP19.86■□□□□ 0.77
CRAMP1-206ENST00000468839 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
CRAMP1-206ENST00000468839 ZNF521Q96K83 1311 aa19.85■□□□□ 0.77
CRAMP1-206ENST00000468839 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
CRAMP1-206ENST00000468839 RGPD1P0DJD0 1748 aa19.85■□□□□ 0.77
CRAMP1-206ENST00000468839 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 MAP3K19Q56UN5 1328 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 SLIT3O75094 1523 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 NFAT5O94916 1531 aa19.84■□□□□ 0.77
CRAMP1-206ENST00000468839 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
CRAMP1-206ENST00000468839 FCHSD2O94868 740 aa19.83■□□□□ 0.77
CRAMP1-206ENST00000468839 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.77
CRAMP1-206ENST00000468839 LTBP4Q8N2S1 1624 aa19.83■□□□□ 0.76
CRAMP1-206ENST00000468839 FLT4P35916 1363 aa19.83■□□□□ 0.76
CRAMP1-206ENST00000468839 NUTM2GQ5VZR2 741 aa19.82■□□□□ 0.76
CRAMP1-206ENST00000468839 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
CRAMP1-206ENST00000468839 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
CRAMP1-206ENST00000468839 SLAIN2Q9P270 581 aa19.82■□□□□ 0.76
CRAMP1-206ENST00000468839 PXDNQ92626 1479 aa19.81■□□□□ 0.76
CRAMP1-206ENST00000468839 USP19O94966 1318 aa19.8■□□□□ 0.76
CRAMP1-206ENST00000468839 CCDC27Q2M243 656 aa19.8■□□□□ 0.76
CRAMP1-206ENST00000468839 BRINP3Q76B58 766 aa19.8■□□□□ 0.76
CRAMP1-206ENST00000468839 DLG5Q8TDM6 1919 aa19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 XPCQ01831 940 aaPredicted RBP19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 NHSL1Q5SYE7 1610 aa19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
CRAMP1-206ENST00000468839 AMPHP49418 695 aa19.78■□□□□ 0.76
CRAMP1-206ENST00000468839 HSP90AB2PQ58FF8 381 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms