RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 NR6A1Q15406 480 aa8.67□□□□□ -1.02
GPNMB-207ENST00000468723 Q6ZNB5 142 aa8.67□□□□□ -1.02
GPNMB-207ENST00000468723 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
GPNMB-207ENST00000468723 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
GPNMB-207ENST00000468723 WNT7AO00755 349 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 PRR20EP86478 221 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 PRR20CP86479 221 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 PRR20DP86480 221 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 PRR20BP86481 221 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 PRR20AP86496 221 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 CYP4X1Q8N118 509 aa8.66□□□□□ -1.02
GPNMB-207ENST00000468723 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-207ENST00000468723 TMEM259Q4ZIN3 620 aa8.65□□□□□ -1.02
GPNMB-207ENST00000468723 EHBP1Q8NDI1 1231 aa8.65□□□□□ -1.02
GPNMB-207ENST00000468723 EPS8L1Q8TE68 723 aa8.65□□□□□ -1.02
GPNMB-207ENST00000468723 TTC24A2A3L6 582 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-207ENST00000468723 FAM187AA6NFU0 413 aa8.64□□□□□ -1.03
GPNMB-207ENST00000468723 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
GPNMB-207ENST00000468723 AGERQ15109 404 aa8.63□□□□□ -1.03
GPNMB-207ENST00000468723 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
GPNMB-207ENST00000468723 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
GPNMB-207ENST00000468723 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
GPNMB-207ENST00000468723 SNIP1Q8TAD8 396 aaKnown RBP8.61□□□□□ -1.03
GPNMB-207ENST00000468723 J3QL48 77 aa8.6□□□□□ -1.03
GPNMB-207ENST00000468723 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
GPNMB-207ENST00000468723 SNRKQ9NRH2 765 aa8.6□□□□□ -1.03
GPNMB-207ENST00000468723 FKBPLQ9UIM3 349 aa8.6□□□□□ -1.03
GPNMB-207ENST00000468723 MAGEB6P1A0A0J9YX57 407 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 SIAH2O43255 324 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
GPNMB-207ENST00000468723 SMPD1P17405 629 aa8.58□□□□□ -1.04
GPNMB-207ENST00000468723 VARSP26640 1264 aaKnown RBP8.58□□□□□ -1.04
GPNMB-207ENST00000468723 BPHLQ86WA6 291 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-207ENST00000468723 LCE2BO14633 110 aa8.57□□□□□ -1.04
GPNMB-207ENST00000468723 DGAT1O75907 488 aa8.57□□□□□ -1.04
GPNMB-207ENST00000468723 TRAF7Q6Q0C0 670 aa8.57□□□□□ -1.04
GPNMB-207ENST00000468723 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
GPNMB-207ENST00000468723 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
GPNMB-207ENST00000468723 ARID5BQ14865 1188 aa8.56□□□□□ -1.04
GPNMB-207ENST00000468723 FAM174AQ8TBP5 190 aa8.56□□□□□ -1.04
GPNMB-207ENST00000468723 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-207ENST00000468723 SH3BP5LQ7L8J4 393 aa8.55□□□□□ -1.04
GPNMB-207ENST00000468723 MTMR14Q8NCE2 650 aa8.55□□□□□ -1.04
GPNMB-207ENST00000468723 MYT1Q01538 1121 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 PDXDC2PQ6P474 469 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 PNMA1Q8ND90 353 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
GPNMB-207ENST00000468723 ARHGAP9Q9BRR9 750 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
GPNMB-207ENST00000468723 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
GPNMB-207ENST00000468723 HPS1Q92902 700 aa8.53□□□□□ -1.04
GPNMB-207ENST00000468723 PTK2Q05397 1052 aa8.52□□□□□ -1.05
GPNMB-207ENST00000468723 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
GPNMB-207ENST00000468723 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
GPNMB-207ENST00000468723 ZC3H4Q9UPT8 1303 aaKnown RBP8.52□□□□□ -1.05
GPNMB-207ENST00000468723 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
GPNMB-207ENST00000468723 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
GPNMB-207ENST00000468723 AVPP01185 164 aa8.49□□□□□ -1.05
GPNMB-207ENST00000468723 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-207ENST00000468723 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
GPNMB-207ENST00000468723 CDK15Q96Q40 435 aa8.49□□□□□ -1.05
GPNMB-207ENST00000468723 AAASQ9NRG9 546 aa8.49□□□□□ -1.05
GPNMB-207ENST00000468723 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
GPNMB-207ENST00000468723 AXIN1O15169 862 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 ADH1CP00326 375 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 NNTQ13423 1086 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 MPNDQ8N594 471 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
GPNMB-207ENST00000468723 GRM5P41594 1212 aa8.47□□□□□ -1.05
GPNMB-207ENST00000468723 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
GPNMB-207ENST00000468723 APBB1O00213 710 aa8.46□□□□□ -1.06
GPNMB-207ENST00000468723 FBXO45P0C2W1 286 aa8.46□□□□□ -1.06
GPNMB-207ENST00000468723 FSHRP23945 695 aa8.46□□□□□ -1.06
GPNMB-207ENST00000468723 MCM6Q14566 821 aa8.46□□□□□ -1.06
GPNMB-207ENST00000468723 TRMT44Q8IYL2 757 aaKnown RBP8.46□□□□□ -1.06
GPNMB-207ENST00000468723 SLC10A4Q96EP9 437 aa8.46□□□□□ -1.06
GPNMB-207ENST00000468723 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
GPNMB-207ENST00000468723 GPR37L1O60883 481 aa8.45□□□□□ -1.06
GPNMB-207ENST00000468723 NR3C2P08235 984 aa8.45□□□□□ -1.06
GPNMB-207ENST00000468723 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
GPNMB-207ENST00000468723 SOCS7O14512 581 aa8.44□□□□□ -1.06
GPNMB-207ENST00000468723 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
GPNMB-207ENST00000468723 GDPD2Q9HCC8 539 aa8.44□□□□□ -1.06
GPNMB-207ENST00000468723 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-207ENST00000468723 ABL2P42684 1182 aa8.43□□□□□ -1.06
GPNMB-207ENST00000468723 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-207ENST00000468723 WDR4P57081 412 aaKnown RBP8.43□□□□□ -1.06
GPNMB-207ENST00000468723 RAB15P59190 212 aa8.43□□□□□ -1.06
GPNMB-207ENST00000468723 NR5A1Q13285 461 aa8.43□□□□□ -1.06
GPNMB-207ENST00000468723 CRIPAKQ8N1N5 446 aa8.43□□□□□ -1.06
GPNMB-207ENST00000468723 KCTD15Q96SI1 283 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-207ENST00000468723 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
GPNMB-207ENST00000468723 MAP4K5Q9Y4K4 846 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms