RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CABP2Q9NPB3 220 aa24.41■■□□□ 1.5
SSBP1-207ENST00000468267 PIAS4Q8N2W9 510 aaPredicted RBP24.4■■□□□ 1.5
SSBP1-207ENST00000468267 SLIT2O94813 1529 aa24.4■■□□□ 1.5
SSBP1-207ENST00000468267 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.38■■□□□ 1.49
SSBP1-207ENST00000468267 RGS12O14924 1447 aa24.38■■□□□ 1.49
SSBP1-207ENST00000468267 UNC5CLQ8IV45 518 aa24.38■■□□□ 1.49
SSBP1-207ENST00000468267 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
SSBP1-207ENST00000468267 PPIP5K1Q6PFW1 1433 aa24.37■■□□□ 1.49
SSBP1-207ENST00000468267 RALGAPBQ86X10 1494 aa24.35■■□□□ 1.49
SSBP1-207ENST00000468267 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
SSBP1-207ENST00000468267 FAM83GA6ND36 823 aa24.34■■□□□ 1.49
SSBP1-207ENST00000468267 GJD4Q96KN9 370 aaPredicted RBP24.34■■□□□ 1.49
SSBP1-207ENST00000468267 CRYBG1Q9Y4K1 1723 aa24.34■■□□□ 1.49
SSBP1-207ENST00000468267 NWD2Q9ULI1 1742 aa24.33■■□□□ 1.49
SSBP1-207ENST00000468267 PLCH1Q4KWH8 1693 aa24.33■■□□□ 1.49
SSBP1-207ENST00000468267 CABP1Q9NZU7 370 aa24.32■■□□□ 1.48
SSBP1-207ENST00000468267 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
SSBP1-207ENST00000468267 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
SSBP1-207ENST00000468267 VPS72Q15906 364 aa24.28■■□□□ 1.48
SSBP1-207ENST00000468267 NUTM2GQ5VZR2 741 aa24.28■■□□□ 1.48
SSBP1-207ENST00000468267 COL14A1Q05707 1796 aaKnown RBP24.28■■□□□ 1.48
SSBP1-207ENST00000468267 BRD4O60885 1362 aaPredicted RBP24.28■■□□□ 1.48
SSBP1-207ENST00000468267 EP400Q96L91 3159 aa24.27■■□□□ 1.48
SSBP1-207ENST00000468267 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
SSBP1-207ENST00000468267 GLI3P10071 1580 aa24.26■■□□□ 1.47
SSBP1-207ENST00000468267 ADRA2BP18089 450 aa24.26■■□□□ 1.47
SSBP1-207ENST00000468267 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
SSBP1-207ENST00000468267 PHRF1Q9P1Y6 1649 aaKnown RBP24.25■■□□□ 1.47
SSBP1-207ENST00000468267 BTG4Q9NY30 223 aa24.25■■□□□ 1.47
SSBP1-207ENST00000468267 USP6P35125 1406 aa24.24■■□□□ 1.47
SSBP1-207ENST00000468267 NRAPQ86VF7 1730 aa24.24■■□□□ 1.47
SSBP1-207ENST00000468267 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
SSBP1-207ENST00000468267 ATAD2Q6PL18 1390 aa24.22■■□□□ 1.47
SSBP1-207ENST00000468267 CLSPNQ9HAW4 1339 aa24.22■■□□□ 1.47
SSBP1-207ENST00000468267 KIAA0232Q92628 1395 aa24.21■■□□□ 1.47
SSBP1-207ENST00000468267 USP19O94966 1318 aa24.21■■□□□ 1.47
SSBP1-207ENST00000468267 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
SSBP1-207ENST00000468267 ZNF692Q9BU19 519 aaPredicted RBP24.21■■□□□ 1.47
SSBP1-207ENST00000468267 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
SSBP1-207ENST00000468267 SSH2Q76I76 1423 aa24.2■■□□□ 1.46
SSBP1-207ENST00000468267 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
SSBP1-207ENST00000468267 AKAP12Q02952 1782 aa24.19■■□□□ 1.46
SSBP1-207ENST00000468267 ONECUT3O60422 494 aaPredicted RBP24.19■■□□□ 1.46
SSBP1-207ENST00000468267 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
SSBP1-207ENST00000468267 CHRNA2Q15822 529 aa24.17■■□□□ 1.46
SSBP1-207ENST00000468267 NRKQ7Z2Y5 1582 aa24.16■■□□□ 1.46
SSBP1-207ENST00000468267 GCP02774 474 aa24.16■■□□□ 1.46
SSBP1-207ENST00000468267 BRWD3Q6RI45 1802 aa24.16■■□□□ 1.46
SSBP1-207ENST00000468267 CPSF1Q10570 1443 aaKnown RBP24.16■■□□□ 1.46
SSBP1-207ENST00000468267 NLRP6P59044 892 aa24.15■■□□□ 1.46
SSBP1-207ENST00000468267 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
SSBP1-207ENST00000468267 CPDO75976 1380 aa24.15■■□□□ 1.46
SSBP1-207ENST00000468267 TTC21BQ7Z4L5 1316 aa24.14■■□□□ 1.46
SSBP1-207ENST00000468267 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.45
SSBP1-207ENST00000468267 PUS7Q96PZ0 661 aaKnown RBP24.14■■□□□ 1.45
SSBP1-207ENST00000468267 TESK2Q96S53 571 aa24.14■■□□□ 1.45
SSBP1-207ENST00000468267 SPATA31A5Q5VU36 1347 aa24.13■■□□□ 1.45
SSBP1-207ENST00000468267 SPATA31A7Q8IWB4 1347 aa24.13■■□□□ 1.45
SSBP1-207ENST00000468267 PIK3C2AO00443 1686 aa24.13■■□□□ 1.45
SSBP1-207ENST00000468267 KTN1Q86UP2 1357 aaKnown RBP24.12■■□□□ 1.45
SSBP1-207ENST00000468267 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
SSBP1-207ENST00000468267 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
SSBP1-207ENST00000468267 FAM98CQ17RN3 349 aaKnown RBP24.1■■□□□ 1.45
SSBP1-207ENST00000468267 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
SSBP1-207ENST00000468267 MON2Q7Z3U7 1717 aa24.1■■□□□ 1.45
SSBP1-207ENST00000468267 SLIT3O75094 1523 aa24.1■■□□□ 1.45
SSBP1-207ENST00000468267 LMO7Q8WWI1 1683 aa24.08■■□□□ 1.45
SSBP1-207ENST00000468267 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.45
SSBP1-207ENST00000468267 CD163L1Q9NR16 1453 aa24.08■■□□□ 1.45
SSBP1-207ENST00000468267 SLC12A5Q9H2X9 1139 aa24.08■■□□□ 1.45
SSBP1-207ENST00000468267 STRN4Q9NRL3 753 aa24.08■■□□□ 1.45
SSBP1-207ENST00000468267 EVA1CP58658 441 aa24.07■■□□□ 1.44
SSBP1-207ENST00000468267 SPATA31A1Q5TZJ5 1347 aa24.07■■□□□ 1.44
SSBP1-207ENST00000468267 USP47Q96K76 1375 aa24.06■■□□□ 1.44
SSBP1-207ENST00000468267 KRT27Q7Z3Y8 459 aa24.06■■□□□ 1.44
SSBP1-207ENST00000468267 CCDC125Q86Z20 511 aa24.06■■□□□ 1.44
SSBP1-207ENST00000468267 A0A0G2JS52 829 aa24.05■■□□□ 1.44
SSBP1-207ENST00000468267 MYT1Q01538 1121 aa24.05■■□□□ 1.44
SSBP1-207ENST00000468267 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
SSBP1-207ENST00000468267 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
SSBP1-207ENST00000468267 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
SSBP1-207ENST00000468267 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.03■■□□□ 1.44
SSBP1-207ENST00000468267 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
SSBP1-207ENST00000468267 LARP1Q6PKG0 1096 aaKnown RBP24.02■■□□□ 1.44
SSBP1-207ENST00000468267 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
SSBP1-207ENST00000468267 THSD7AQ9UPZ6 1657 aa24.02■■□□□ 1.44
SSBP1-207ENST00000468267 ZBTB7CA1YPR0 619 aa24.01■■□□□ 1.43
SSBP1-207ENST00000468267 NINLQ9Y2I6 1382 aa24.01■■□□□ 1.43
SSBP1-207ENST00000468267 COL18A1P39060 1754 aa24.01■■□□□ 1.43
SSBP1-207ENST00000468267 TMF1P82094 1093 aa24■■□□□ 1.43
SSBP1-207ENST00000468267 ARHGEF25Q86VW2 580 aa24■■□□□ 1.43
SSBP1-207ENST00000468267 A0A1W2PP64 1363 aa24■■□□□ 1.43
SSBP1-207ENST00000468267 USP31Q70CQ4 1352 aa24■■□□□ 1.43
SSBP1-207ENST00000468267 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
SSBP1-207ENST00000468267 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
SSBP1-207ENST00000468267 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
SSBP1-207ENST00000468267 BARGINQ6ZT62 677 aa23.98■■□□□ 1.43
SSBP1-207ENST00000468267 NME9Q86XW9 330 aa23.98■■□□□ 1.43
SSBP1-207ENST00000468267 USP35Q9P2H5 1018 aa23.98■■□□□ 1.43
SSBP1-207ENST00000468267 USP54Q70EL1 1684 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms