RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 DZIP1LQ8IYY4 767 aaKnown RBP18.45■□□□□ 0.54
SEC16A-208ENST00000467838 POGKQ9P215 609 aa18.45■□□□□ 0.54
SEC16A-208ENST00000467838 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
SEC16A-208ENST00000467838 TMEM132EQ6IEE7 984 aa18.44■□□□□ 0.54
SEC16A-208ENST00000467838 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
SEC16A-208ENST00000467838 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
SEC16A-208ENST00000467838 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
SEC16A-208ENST00000467838 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
SEC16A-208ENST00000467838 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
SEC16A-208ENST00000467838 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEC16A-208ENST00000467838 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
SEC16A-208ENST00000467838 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
SEC16A-208ENST00000467838 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
SEC16A-208ENST00000467838 TRIM27P14373 513 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 MLECQ14165 292 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 L1TD1Q5T7N2 865 aaKnown RBP18.4■□□□□ 0.54
SEC16A-208ENST00000467838 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 PTPRMP28827 1452 aa18.4■□□□□ 0.54
SEC16A-208ENST00000467838 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.53
SEC16A-208ENST00000467838 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
SEC16A-208ENST00000467838 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
SEC16A-208ENST00000467838 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
SEC16A-208ENST00000467838 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
SEC16A-208ENST00000467838 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
SEC16A-208ENST00000467838 KIF20BQ96Q89 1820 aa18.38■□□□□ 0.53
SEC16A-208ENST00000467838 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
SEC16A-208ENST00000467838 PNPLA6Q8IY17 1366 aa18.38■□□□□ 0.53
SEC16A-208ENST00000467838 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
SEC16A-208ENST00000467838 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
SEC16A-208ENST00000467838 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
SEC16A-208ENST00000467838 C22orf23Q9BZE7 217 aa18.36■□□□□ 0.53
SEC16A-208ENST00000467838 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
SEC16A-208ENST00000467838 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
SEC16A-208ENST00000467838 FSD2A1L4K1 749 aa18.35■□□□□ 0.53
SEC16A-208ENST00000467838 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
SEC16A-208ENST00000467838 TMEM131LA2VDJ0 1609 aa18.35■□□□□ 0.53
SEC16A-208ENST00000467838 PREX1Q8TCU6 1659 aa18.34■□□□□ 0.53
SEC16A-208ENST00000467838 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
SEC16A-208ENST00000467838 MCM4P33991 863 aa18.33■□□□□ 0.53
SEC16A-208ENST00000467838 ZBTB40Q9NUA8 1239 aa18.33■□□□□ 0.53
SEC16A-208ENST00000467838 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.53
SEC16A-208ENST00000467838 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
SEC16A-208ENST00000467838 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
SEC16A-208ENST00000467838 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
SEC16A-208ENST00000467838 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
SEC16A-208ENST00000467838 ZNF692Q9BU19 519 aaPredicted RBP18.31■□□□□ 0.52
SEC16A-208ENST00000467838 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
SEC16A-208ENST00000467838 DDIT3P35638 169 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
SEC16A-208ENST00000467838 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
SEC16A-208ENST00000467838 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 FYB1O15117 783 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 NUCB1Q02818 461 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
SEC16A-208ENST00000467838 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
SEC16A-208ENST00000467838 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
SEC16A-208ENST00000467838 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
SEC16A-208ENST00000467838 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
SEC16A-208ENST00000467838 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
SEC16A-208ENST00000467838 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
SEC16A-208ENST00000467838 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
SEC16A-208ENST00000467838 SNX21Q969T3 373 aa18.28■□□□□ 0.52
SEC16A-208ENST00000467838 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
SEC16A-208ENST00000467838 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
SEC16A-208ENST00000467838 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
SEC16A-208ENST00000467838 SLC52A1Q9NWF4 448 aa18.28■□□□□ 0.52
SEC16A-208ENST00000467838 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
SEC16A-208ENST00000467838 IDI1Q13907 227 aa18.26■□□□□ 0.51
SEC16A-208ENST00000467838 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
SEC16A-208ENST00000467838 PRKCSHP14314 528 aaPredicted RBP18.26■□□□□ 0.51
SEC16A-208ENST00000467838 RIPK4P57078 832 aa18.26■□□□□ 0.51
SEC16A-208ENST00000467838 HSCBQ8IWL3 235 aa18.26■□□□□ 0.51
SEC16A-208ENST00000467838 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
SEC16A-208ENST00000467838 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
SEC16A-208ENST00000467838 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
SEC16A-208ENST00000467838 SPATA31D1Q6ZQQ2 1576 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 XRCC6P12956 609 aaKnown RBP eCLIP18.24■□□□□ 0.51
SEC16A-208ENST00000467838 ATP7BP35670 1465 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 FCHSD2O94868 740 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
SEC16A-208ENST00000467838 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
SEC16A-208ENST00000467838 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
SEC16A-208ENST00000467838 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SEC16A-208ENST00000467838 RRAGDQ9NQL2 400 aaPredicted RBP18.22■□□□□ 0.51
SEC16A-208ENST00000467838 TRAK2O60296 914 aa18.22■□□□□ 0.51
SEC16A-208ENST00000467838 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
SEC16A-208ENST00000467838 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
SEC16A-208ENST00000467838 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.5
SEC16A-208ENST00000467838 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.5
SEC16A-208ENST00000467838 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
SEC16A-208ENST00000467838 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
SEC16A-208ENST00000467838 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
SEC16A-208ENST00000467838 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
SEC16A-208ENST00000467838 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms