RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 SLC24A1O60721 1099 aa36.52■■■■□ 3.44
PDCD4-205ENST00000467574 LMOD2Q6P5Q4 547 aa36.52■■■■□ 3.44
PDCD4-205ENST00000467574 ADAMTS2O95450 1211 aa36.51■■■■□ 3.44
PDCD4-205ENST00000467574 BRD4O60885 1362 aaPredicted RBP36.51■■■■□ 3.43
PDCD4-205ENST00000467574 PHRF1Q9P1Y6 1649 aaKnown RBP36.5■■■■□ 3.43
PDCD4-205ENST00000467574 PAK3O75914 559 aaPredicted RBP36.5■■■■□ 3.43
PDCD4-205ENST00000467574 CABLES1Q8TDN4 633 aa36.48■■■■□ 3.43
PDCD4-205ENST00000467574 PIK3C2AO00443 1686 aa36.48■■■■□ 3.43
PDCD4-205ENST00000467574 TMF1P82094 1093 aa36.46■■■■□ 3.43
PDCD4-205ENST00000467574 C8orf37Q96NL8 207 aa36.46■■■■□ 3.43
PDCD4-205ENST00000467574 ILDR2Q71H61 639 aa36.44■■■■□ 3.42
PDCD4-205ENST00000467574 MYOM1P52179 1685 aa36.44■■■■□ 3.42
PDCD4-205ENST00000467574 AFF2P51816 1311 aa36.43■■■■□ 3.42
PDCD4-205ENST00000467574 HSPA5P11021 654 aaKnown RBP36.43■■■■□ 3.42
PDCD4-205ENST00000467574 EIF4G2P78344 907 aaKnown RBP eCLIP36.43■■■■□ 3.42
PDCD4-205ENST00000467574 SLC12A5Q9H2X9 1139 aa36.43■■■■□ 3.42
PDCD4-205ENST00000467574 NINLQ9Y2I6 1382 aa36.42■■■■□ 3.42
PDCD4-205ENST00000467574 POTEAQ6S8J7 498 aa36.41■■■■□ 3.42
PDCD4-205ENST00000467574 ZNF692Q9BU19 519 aaPredicted RBP36.41■■■■□ 3.42
PDCD4-205ENST00000467574 PLEKHG5O94827 1062 aa36.4■■■■□ 3.42
PDCD4-205ENST00000467574 TMC1Q8TDI8 760 aa36.4■■■■□ 3.42
PDCD4-205ENST00000467574 KTN1Q86UP2 1357 aaKnown RBP36.4■■■■□ 3.42
PDCD4-205ENST00000467574 PLCH1Q4KWH8 1693 aa36.39■■■■□ 3.42
PDCD4-205ENST00000467574 A0A1W2PP64 1363 aa36.39■■■■□ 3.42
PDCD4-205ENST00000467574 NUTM2GQ5VZR2 741 aa36.37■■■■□ 3.41
PDCD4-205ENST00000467574 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.37■■■■□ 3.41
PDCD4-205ENST00000467574 USP19O94966 1318 aa36.36■■■■□ 3.41
PDCD4-205ENST00000467574 FNBP4Q8N3X1 1017 aaPredicted RBP36.36■■■■□ 3.41
PDCD4-205ENST00000467574 ABTB2Q8N961 1025 aa36.36■■■■□ 3.41
PDCD4-205ENST00000467574 NGLY1Q96IV0 654 aa36.36■■■■□ 3.41
PDCD4-205ENST00000467574 TTC21BQ7Z4L5 1316 aa36.35■■■■□ 3.41
PDCD4-205ENST00000467574 SLIT2O94813 1529 aa36.35■■■■□ 3.41
PDCD4-205ENST00000467574 ZNF772Q68DY9 489 aaPredicted RBP36.35■■■■□ 3.41
PDCD4-205ENST00000467574 USP54Q70EL1 1684 aa36.35■■■■□ 3.41
PDCD4-205ENST00000467574 NWD2Q9ULI1 1742 aa36.34■■■■□ 3.41
PDCD4-205ENST00000467574 HAP1P54257 671 aaPredicted RBP36.34■■■■□ 3.41
PDCD4-205ENST00000467574 SLIT3O75094 1523 aa36.33■■■■□ 3.41
PDCD4-205ENST00000467574 BCL9LQ86UU0 1499 aa36.32■■■■□ 3.41
PDCD4-205ENST00000467574 CDCA8Q53HL2 280 aa36.32■■■■□ 3.4
PDCD4-205ENST00000467574 COL14A1Q05707 1796 aaKnown RBP36.31■■■■□ 3.4
PDCD4-205ENST00000467574 EDC4Q6P2E9 1401 aaKnown RBP36.31■■■■□ 3.4
PDCD4-205ENST00000467574 TTC21AQ8NDW8 1320 aa36.31■■■■□ 3.4
PDCD4-205ENST00000467574 HDGFL2Q7Z4V5 671 aaPredicted RBP36.3■■■■□ 3.4
PDCD4-205ENST00000467574 TERF2IPQ9NYB0 399 aa36.3■■■■□ 3.4
PDCD4-205ENST00000467574 NRAPQ86VF7 1730 aa36.29■■■■□ 3.4
PDCD4-205ENST00000467574 ANKRD36BQ8N2N9 1353 aa36.28■■■■□ 3.4
PDCD4-205ENST00000467574 NLRP13Q86W25 1043 aa36.26■■■■□ 3.4
PDCD4-205ENST00000467574 USP21Q9UK80 565 aa36.26■■■■□ 3.4
PDCD4-205ENST00000467574 ATRNO75882 1429 aa36.25■■■■□ 3.39
PDCD4-205ENST00000467574 FAM83GA6ND36 823 aa36.24■■■■□ 3.39
PDCD4-205ENST00000467574 NLRP6P59044 892 aa36.23■■■■□ 3.39
PDCD4-205ENST00000467574 KIAA0232Q92628 1395 aa36.23■■■■□ 3.39
PDCD4-205ENST00000467574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.21■■■■□ 3.39
PDCD4-205ENST00000467574 CPDO75976 1380 aa36.2■■■■□ 3.39
PDCD4-205ENST00000467574 USP31Q70CQ4 1352 aa36.2■■■■□ 3.39
PDCD4-205ENST00000467574 LMO7Q8WWI1 1683 aa36.19■■■■□ 3.38
PDCD4-205ENST00000467574 NFAT5O94916 1531 aa36.18■■■■□ 3.38
PDCD4-205ENST00000467574 GCP02774 474 aa36.18■■■■□ 3.38
PDCD4-205ENST00000467574 NME9Q86XW9 330 aa36.18■■■■□ 3.38
PDCD4-205ENST00000467574 QTRT2Q9H974 415 aaKnown RBP36.18■■■■□ 3.38
PDCD4-205ENST00000467574 C11orf95C9JLR9 678 aaPredicted RBP36.17■■■■□ 3.38
PDCD4-205ENST00000467574 UNC5CLQ8IV45 518 aa36.16■■■■□ 3.38
PDCD4-205ENST00000467574 PRDM11Q9NQV5 511 aa36.16■■■■□ 3.38
PDCD4-205ENST00000467574 ZRANB1Q9UGI0 708 aa36.16■■■■□ 3.38
PDCD4-205ENST00000467574 OVOS2A0A0J9YW53 1432 aa36.16■■■■□ 3.38
PDCD4-205ENST00000467574 OVOS2Q6IE36 1432 aa36.16■■■■□ 3.38
PDCD4-205ENST00000467574 ZC3H6P61129 1189 aaKnown RBP36.15■■■■□ 3.38
PDCD4-205ENST00000467574 TRPC5Q9UL62 973 aaPredicted RBP36.15■■■■□ 3.38
PDCD4-205ENST00000467574 KIF20BQ96Q89 1820 aa36.14■■■■□ 3.38
PDCD4-205ENST00000467574 COL18A1P39060 1754 aa36.12■■■■□ 3.37
PDCD4-205ENST00000467574 CDK12Q9NYV4 1490 aaPredicted RBP36.12■■■■□ 3.37
PDCD4-205ENST00000467574 GLI3P10071 1580 aa36.12■■■■□ 3.37
PDCD4-205ENST00000467574 RXRBP28702 533 aa36.11■■■■□ 3.37
PDCD4-205ENST00000467574 CHRNA2Q15822 529 aa36.11■■■■□ 3.37
PDCD4-205ENST00000467574 BTG4Q9NY30 223 aa36.1■■■■□ 3.37
PDCD4-205ENST00000467574 RBM6P78332 1123 aaKnown RBP36.09■■■■□ 3.37
PDCD4-205ENST00000467574 CAMTA1Q9Y6Y1 1673 aa36.09■■■■□ 3.37
PDCD4-205ENST00000467574 POLR3GLQ9BT43 218 aa36.08■■■■□ 3.37
PDCD4-205ENST00000467574 CARD14Q9BXL6 1004 aa36.07■■■■□ 3.36
PDCD4-205ENST00000467574 LTN1O94822 1766 aa36.06■■■■□ 3.36
PDCD4-205ENST00000467574 RGS12O14924 1447 aa36.06■■■■□ 3.36
PDCD4-205ENST00000467574 NSD3Q9BZ95 1437 aa36.06■■■■□ 3.36
PDCD4-205ENST00000467574 KIF7Q2M1P5 1343 aa36.05■■■■□ 3.36
PDCD4-205ENST00000467574 VPS72Q15906 364 aa36.04■■■■□ 3.36
PDCD4-205ENST00000467574 KCNH5Q8NCM2 988 aa36.04■■■■□ 3.36
PDCD4-205ENST00000467574 RGPD5Q99666 1765 aa36.03■■■■□ 3.36
PDCD4-205ENST00000467574 GJD4Q96KN9 370 aaPredicted RBP36.02■■■■□ 3.36
PDCD4-205ENST00000467574 AATKQ6ZMQ8 1374 aa36.02■■■■□ 3.36
PDCD4-205ENST00000467574 ABCC6O95255 1503 aa36■■■■□ 3.35
PDCD4-205ENST00000467574 ARHGEF25Q86VW2 580 aa36■■■■□ 3.35
PDCD4-205ENST00000467574 FYB1O15117 783 aa35.99■■■■□ 3.35
PDCD4-205ENST00000467574 SOX12O15370 315 aa35.99■■■■□ 3.35
PDCD4-205ENST00000467574 COL5A2P05997 1499 aaPredicted RBP35.99■■■■□ 3.35
PDCD4-205ENST00000467574 ANKRD26Q9UPS8 1709 aa35.94■■■■□ 3.34
PDCD4-205ENST00000467574 SOCS7O14512 581 aa35.93■■■■□ 3.34
PDCD4-205ENST00000467574 COG3Q96JB2 828 aa35.93■■■■□ 3.34
PDCD4-205ENST00000467574 GGNBP2Q9H3C7 697 aa35.93■■■■□ 3.34
PDCD4-205ENST00000467574 CCDC7Q96M83 1385 aa35.92■■■■□ 3.34
PDCD4-205ENST00000467574 ZBTB7CA1YPR0 619 aa35.92■■■■□ 3.34
PDCD4-205ENST00000467574 SPATA31A5Q5VU36 1347 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms