RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
CCHCR1-211ENST00000467553 SEPT12Q8IYM1 358 aa20.17■□□□□ 0.82
CCHCR1-211ENST00000467553 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
CCHCR1-211ENST00000467553 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-211ENST00000467553 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
CCHCR1-211ENST00000467553 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
CCHCR1-211ENST00000467553 ZRANB1Q9UGI0 708 aa20.16■□□□□ 0.82
CCHCR1-211ENST00000467553 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
CCHCR1-211ENST00000467553 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
CCHCR1-211ENST00000467553 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
CCHCR1-211ENST00000467553 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
CCHCR1-211ENST00000467553 NRAPQ86VF7 1730 aa20.15■□□□□ 0.82
CCHCR1-211ENST00000467553 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.81
CCHCR1-211ENST00000467553 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
CCHCR1-211ENST00000467553 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
CCHCR1-211ENST00000467553 SF3B2Q13435 895 aaKnown RBP20.13■□□□□ 0.81
CCHCR1-211ENST00000467553 KRT27Q7Z3Y8 459 aa20.13■□□□□ 0.81
CCHCR1-211ENST00000467553 TOPAZ1Q8N9V7 1692 aa20.12■□□□□ 0.81
CCHCR1-211ENST00000467553 BRD4O60885 1362 aaPredicted RBP20.11■□□□□ 0.81
CCHCR1-211ENST00000467553 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
CCHCR1-211ENST00000467553 ACEP12821 1306 aa20.1■□□□□ 0.81
CCHCR1-211ENST00000467553 PRDM11Q9NQV5 511 aa20.1■□□□□ 0.81
CCHCR1-211ENST00000467553 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
CCHCR1-211ENST00000467553 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
CCHCR1-211ENST00000467553 SRCAPQ6ZRS2 3230 aa20.08■□□□□ 0.81
CCHCR1-211ENST00000467553 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
CCHCR1-211ENST00000467553 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
CCHCR1-211ENST00000467553 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
CCHCR1-211ENST00000467553 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
CCHCR1-211ENST00000467553 A0A0G2JS52 829 aa20.05■□□□□ 0.8
CCHCR1-211ENST00000467553 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
CCHCR1-211ENST00000467553 MYT1Q01538 1121 aa20.05■□□□□ 0.8
CCHCR1-211ENST00000467553 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
CCHCR1-211ENST00000467553 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
CCHCR1-211ENST00000467553 NLRP13Q86W25 1043 aa20.03■□□□□ 0.8
CCHCR1-211ENST00000467553 PPIP5K1Q6PFW1 1433 aa20.02■□□□□ 0.8
CCHCR1-211ENST00000467553 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-211ENST00000467553 CPDO75976 1380 aa20.02■□□□□ 0.8
CCHCR1-211ENST00000467553 QRICH2Q9H0J4 1663 aa20.02■□□□□ 0.8
CCHCR1-211ENST00000467553 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.79
CCHCR1-211ENST00000467553 BAG6P46379 1132 aa20.01■□□□□ 0.79
CCHCR1-211ENST00000467553 TRPM1Q7Z4N2 1603 aa20.01■□□□□ 0.79
CCHCR1-211ENST00000467553 USP19O94966 1318 aa20.01■□□□□ 0.79
CCHCR1-211ENST00000467553 THSD7AQ9UPZ6 1657 aa20■□□□□ 0.79
CCHCR1-211ENST00000467553 EVC2Q86UK5 1308 aa20■□□□□ 0.79
CCHCR1-211ENST00000467553 EVA1CP58658 441 aa19.99■□□□□ 0.79
CCHCR1-211ENST00000467553 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-211ENST00000467553 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
CCHCR1-211ENST00000467553 RGPD1P0DJD0 1748 aa19.99■□□□□ 0.79
CCHCR1-211ENST00000467553 CABP2Q9NPB3 220 aa19.98■□□□□ 0.79
CCHCR1-211ENST00000467553 NRKQ7Z2Y5 1582 aa19.97■□□□□ 0.79
CCHCR1-211ENST00000467553 CHRNA2Q15822 529 aa19.97■□□□□ 0.79
CCHCR1-211ENST00000467553 NUTM2GQ5VZR2 741 aa19.97■□□□□ 0.79
CCHCR1-211ENST00000467553 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
CCHCR1-211ENST00000467553 GCP02774 474 aa19.96■□□□□ 0.79
CCHCR1-211ENST00000467553 CARD11Q9BXL7 1154 aa19.96■□□□□ 0.79
CCHCR1-211ENST00000467553 THRAP3Q9Y2W1 955 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-211ENST00000467553 FAM196AQ6ZSG2 479 aa19.95■□□□□ 0.78
CCHCR1-211ENST00000467553 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
CCHCR1-211ENST00000467553 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
CCHCR1-211ENST00000467553 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
CCHCR1-211ENST00000467553 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
CCHCR1-211ENST00000467553 DISP2A7MBM2 1401 aa19.94■□□□□ 0.78
CCHCR1-211ENST00000467553 USP6P35125 1406 aa19.94■□□□□ 0.78
CCHCR1-211ENST00000467553 SSH2Q76I76 1423 aa19.94■□□□□ 0.78
CCHCR1-211ENST00000467553 LMO7Q8WWI1 1683 aa19.94■□□□□ 0.78
CCHCR1-211ENST00000467553 C11orf95C9JLR9 678 aaPredicted RBP19.93■□□□□ 0.78
CCHCR1-211ENST00000467553 CAMTA1Q9Y6Y1 1673 aa19.92■□□□□ 0.78
CCHCR1-211ENST00000467553 TCP11L2Q8N4U5 519 aa19.92■□□□□ 0.78
CCHCR1-211ENST00000467553 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
CCHCR1-211ENST00000467553 NLRP6P59044 892 aa19.9■□□□□ 0.78
CCHCR1-211ENST00000467553 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
CCHCR1-211ENST00000467553 SLIT3O75094 1523 aa19.9■□□□□ 0.78
CCHCR1-211ENST00000467553 AATKQ6ZMQ8 1374 aa19.89■□□□□ 0.77
CCHCR1-211ENST00000467553 PARD3Q8TEW0 1356 aa19.88■□□□□ 0.77
CCHCR1-211ENST00000467553 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
CCHCR1-211ENST00000467553 TTC21AQ8NDW8 1320 aa19.88■□□□□ 0.77
CCHCR1-211ENST00000467553 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-211ENST00000467553 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-211ENST00000467553 COL5A2P05997 1499 aaPredicted RBP19.87■□□□□ 0.77
CCHCR1-211ENST00000467553 KCNH5Q8NCM2 988 aa19.87■□□□□ 0.77
CCHCR1-211ENST00000467553 USP35Q9P2H5 1018 aa19.87■□□□□ 0.77
CCHCR1-211ENST00000467553 CRB1P82279 1406 aa19.86■□□□□ 0.77
CCHCR1-211ENST00000467553 AKAP12Q02952 1782 aa19.86■□□□□ 0.77
CCHCR1-211ENST00000467553 EN1Q05925 392 aaPredicted RBP19.86■□□□□ 0.77
CCHCR1-211ENST00000467553 LRP5O75197 1615 aa19.85■□□□□ 0.77
CCHCR1-211ENST00000467553 FAM182BQ5T319 152 aa19.85■□□□□ 0.77
CCHCR1-211ENST00000467553 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
CCHCR1-211ENST00000467553 PARP4Q9UKK3 1724 aaKnown RBP19.85■□□□□ 0.77
CCHCR1-211ENST00000467553 TTC21BQ7Z4L5 1316 aa19.84■□□□□ 0.77
CCHCR1-211ENST00000467553 PIK3C2AO00443 1686 aa19.84■□□□□ 0.77
CCHCR1-211ENST00000467553 CPSF1Q10570 1443 aaKnown RBP19.83■□□□□ 0.76
CCHCR1-211ENST00000467553 TRIM37O94972 964 aa19.82■□□□□ 0.76
CCHCR1-211ENST00000467553 CAMKK2Q96RR4 588 aa19.82■□□□□ 0.76
CCHCR1-211ENST00000467553 PUS7Q96PZ0 661 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-211ENST00000467553 CDCA7Q9BWT1 371 aaPredicted RBP19.81■□□□□ 0.76
CCHCR1-211ENST00000467553 COL18A1P39060 1754 aa19.8■□□□□ 0.76
CCHCR1-211ENST00000467553 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
CCHCR1-211ENST00000467553 APBA3O96018 575 aa19.8■□□□□ 0.76
CCHCR1-211ENST00000467553 ARHGEF25Q86VW2 580 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms