RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ERICH6Q7L0X2 663 aa8.43□□□□□ -1.06
SMC4-208ENST00000467468 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
SMC4-208ENST00000467468 WNT7AO00755 349 aa8.42□□□□□ -1.06
SMC4-208ENST00000467468 NBPF14Q5TI25 921 aa8.42□□□□□ -1.06
SMC4-208ENST00000467468 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
SMC4-208ENST00000467468 APBB1O00213 710 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 TNFRSF10AO00220 468 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 GDF9O60383 454 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 LRRN4Q8WUT4 740 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 BAP1Q92560 729 aa8.4□□□□□ -1.06
SMC4-208ENST00000467468 RC3H1Q5TC82 1133 aaKnown RBP8.39□□□□□ -1.07
SMC4-208ENST00000467468 TRIM67Q6ZTA4 783 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 CYP4X1Q8N118 509 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.074e-13■□□□□ 10.3
SMC4-208ENST00000467468 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
SMC4-208ENST00000467468 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
SMC4-208ENST00000467468 SH3BP2P78314 561 aa8.37□□□□□ -1.07
SMC4-208ENST00000467468 SKOR1P84550 965 aa8.37□□□□□ -1.07
SMC4-208ENST00000467468 AGERQ15109 404 aa8.37□□□□□ -1.07
SMC4-208ENST00000467468 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
SMC4-208ENST00000467468 BPHLQ86WA6 291 aaPredicted RBP8.36□□□□□ -1.07
SMC4-208ENST00000467468 MRGPRX2Q96LB1 330 aa8.36□□□□□ -1.07
SMC4-208ENST00000467468 SOCS7O14512 581 aa8.35□□□□□ -1.07
SMC4-208ENST00000467468 VARSP26640 1264 aaKnown RBP8.35□□□□□ -1.07
SMC4-208ENST00000467468 NR6A1Q15406 480 aa8.35□□□□□ -1.07
SMC4-208ENST00000467468 PKDCCQ504Y2 493 aa8.35□□□□□ -1.07
SMC4-208ENST00000467468 Q6ZNB5 142 aa8.35□□□□□ -1.07
SMC4-208ENST00000467468 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
SMC4-208ENST00000467468 FKBPLQ9UIM3 349 aa8.35□□□□□ -1.07
SMC4-208ENST00000467468 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
SMC4-208ENST00000467468 FAM174AQ8TBP5 190 aa8.34□□□□□ -1.07
SMC4-208ENST00000467468 DGAT1O75907 488 aa8.33□□□□□ -1.08
SMC4-208ENST00000467468 HMX1Q9NP08 348 aaPredicted RBP8.33□□□□□ -1.08
SMC4-208ENST00000467468 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
SMC4-208ENST00000467468 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
SMC4-208ENST00000467468 PRM3Q9NNZ6 103 aa8.32□□□□□ -1.08
SMC4-208ENST00000467468 PTK2Q05397 1052 aa8.31□□□□□ -1.08
SMC4-208ENST00000467468 FOXJ1Q92949 421 aa8.31□□□□□ -1.08
SMC4-208ENST00000467468 GPSM3Q9Y4H4 160 aa8.31□□□□□ -1.08
SMC4-208ENST00000467468 MAGEB6P1A0A0J9YX57 407 aa8.3□□□□□ -1.08
SMC4-208ENST00000467468 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
SMC4-208ENST00000467468 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
SMC4-208ENST00000467468 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
SMC4-208ENST00000467468 MPNDQ8N594 471 aa8.29□□□□□ -1.08
SMC4-208ENST00000467468 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
SMC4-208ENST00000467468 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
SMC4-208ENST00000467468 WASF2Q9Y6W5 498 aa8.29□□□□□ -1.08
SMC4-208ENST00000467468 SIAH2O43255 324 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 ZBTB33Q86T24 672 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 MTMR14Q8NCE2 650 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 EPS8L1Q8TE68 723 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 CARD14Q9BXL6 1004 aa8.28□□□□□ -1.08
SMC4-208ENST00000467468 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
SMC4-208ENST00000467468 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
SMC4-208ENST00000467468 TLL2Q9Y6L7 1015 aa8.27□□□□□ -1.09
SMC4-208ENST00000467468 SMPD1P17405 629 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 TRMT44Q8IYL2 757 aaKnown RBP8.26□□□□□ -1.09
SMC4-208ENST00000467468 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 SNRKQ9NRH2 765 aa8.26□□□□□ -1.09
SMC4-208ENST00000467468 CDV3Q9UKY7 258 aaKnown RBP8.26□□□□□ -1.09
SMC4-208ENST00000467468 J3QL48 77 aa8.25□□□□□ -1.09
SMC4-208ENST00000467468 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
SMC4-208ENST00000467468 CDK15Q96Q40 435 aa8.25□□□□□ -1.09
SMC4-208ENST00000467468 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
SMC4-208ENST00000467468 ADH1CP00326 375 aa8.24□□□□□ -1.09
SMC4-208ENST00000467468 AVPP01185 164 aa8.24□□□□□ -1.09
SMC4-208ENST00000467468 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
SMC4-208ENST00000467468 C14orf37Q86TY3 774 aa8.24□□□□□ -1.09
SMC4-208ENST00000467468 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
SMC4-208ENST00000467468 ZBBXA8MT70 800 aa8.23□□□□□ -1.09
SMC4-208ENST00000467468 FLIIQ13045 1269 aa8.23□□□□□ -1.09
SMC4-208ENST00000467468 MCM6Q14566 821 aa8.23□□□□□ -1.09
SMC4-208ENST00000467468 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
SMC4-208ENST00000467468 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
SMC4-208ENST00000467468 AXIN1O15169 862 aa8.22□□□□□ -1.09
SMC4-208ENST00000467468 MYT1Q01538 1121 aa8.22□□□□□ -1.09
SMC4-208ENST00000467468 NR5A1Q13285 461 aa8.22□□□□□ -1.09
SMC4-208ENST00000467468 ADAM32Q8TC27 787 aa8.22□□□□□ -1.09
SMC4-208ENST00000467468 NNTQ13423 1086 aa8.21□□□□□ -1.1
SMC4-208ENST00000467468 NBPF20Q3BBV1 942 aa8.21□□□□□ -1.1
SMC4-208ENST00000467468 DZIP3Q86Y13 1208 aaKnown RBP8.21□□□□□ -1.1
SMC4-208ENST00000467468 CRIPAKQ8N1N5 446 aa8.21□□□□□ -1.1
SMC4-208ENST00000467468 HPS1Q92902 700 aa8.21□□□□□ -1.1
SMC4-208ENST00000467468 FSHRP23945 695 aa8.2□□□□□ -1.1
SMC4-208ENST00000467468 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
SMC4-208ENST00000467468 ARXQ96QS3 562 aa8.2□□□□□ -1.1
SMC4-208ENST00000467468 NR1H3Q13133 447 aa8.19□□□□□ -1.1
SMC4-208ENST00000467468 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
SMC4-208ENST00000467468 TBC1D2BQ9UPU7 963 aa8.19□□□□□ -1.1
SMC4-208ENST00000467468 RAD21O60216 631 aa8.18□□□□□ -1.1
SMC4-208ENST00000467468 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
SMC4-208ENST00000467468 MCCD1P59942 119 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms