RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPTA1-204ENST00000467387 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
SPTA1-204ENST00000467387 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
SPTA1-204ENST00000467387 C8orf37Q96NL8 207 aa11.37□□□□□ -0.59
SPTA1-204ENST00000467387 OCEL1Q9H607 264 aa11.37□□□□□ -0.59
SPTA1-204ENST00000467387 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
SPTA1-204ENST00000467387 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
SPTA1-204ENST00000467387 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
SPTA1-204ENST00000467387 ROCK1Q13464 1354 aa11.36□□□□□ -0.59
SPTA1-204ENST00000467387 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
SPTA1-204ENST00000467387 MST1RQ04912 1400 aa11.35□□□□□ -0.59
SPTA1-204ENST00000467387 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
SPTA1-204ENST00000467387 PLCG2P16885 1265 aa11.35□□□□□ -0.59
SPTA1-204ENST00000467387 SETBP1Q9Y6X0 1596 aa11.35□□□□□ -0.59
SPTA1-204ENST00000467387 SEC24BO95487 1268 aa11.34□□□□□ -0.59
SPTA1-204ENST00000467387 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
SPTA1-204ENST00000467387 SETD5Q9C0A6 1442 aa11.34□□□□□ -0.59
SPTA1-204ENST00000467387 ADGRL3Q9HAR2 1447 aa11.34□□□□□ -0.59
SPTA1-204ENST00000467387 SPHKAPQ2M3C7 1700 aa11.33□□□□□ -0.6
SPTA1-204ENST00000467387 LRRC59Q96AG4 307 aaKnown RBP11.33□□□□□ -0.6
SPTA1-204ENST00000467387 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
SPTA1-204ENST00000467387 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
SPTA1-204ENST00000467387 RGS12O14924 1447 aa11.33□□□□□ -0.6
SPTA1-204ENST00000467387 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
SPTA1-204ENST00000467387 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
SPTA1-204ENST00000467387 METP08581 1390 aa11.31□□□□□ -0.6
SPTA1-204ENST00000467387 DDX17Q92841 729 aaKnown RBP11.31□□□□□ -0.6
SPTA1-204ENST00000467387 NALCNQ8IZF0 1738 aa11.31□□□□□ -0.6
SPTA1-204ENST00000467387 RBM6P78332 1123 aaKnown RBP11.3□□□□□ -0.6
SPTA1-204ENST00000467387 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
SPTA1-204ENST00000467387 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
SPTA1-204ENST00000467387 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
SPTA1-204ENST00000467387 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
SPTA1-204ENST00000467387 QTRT2Q9H974 415 aaKnown RBP11.29□□□□□ -0.6
SPTA1-204ENST00000467387 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
SPTA1-204ENST00000467387 HRCP23327 699 aa11.28□□□□□ -0.6
SPTA1-204ENST00000467387 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
SPTA1-204ENST00000467387 CLTCL1P53675 1640 aa11.27□□□□□ -0.6
SPTA1-204ENST00000467387 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
SPTA1-204ENST00000467387 PPP1R37O75864 691 aa11.27□□□□□ -0.61
SPTA1-204ENST00000467387 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
SPTA1-204ENST00000467387 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
SPTA1-204ENST00000467387 USP21Q9UK80 565 aa11.26□□□□□ -0.61
SPTA1-204ENST00000467387 PPARGC1BQ86YN6 1023 aaKnown RBP11.25□□□□□ -0.61
SPTA1-204ENST00000467387 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
SPTA1-204ENST00000467387 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
SPTA1-204ENST00000467387 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
SPTA1-204ENST00000467387 KIF1BO60333 1816 aa11.23□□□□□ -0.61
SPTA1-204ENST00000467387 ROBO2Q9HCK4 1378 aa11.23□□□□□ -0.61
SPTA1-204ENST00000467387 ORAI2Q96SN7 254 aa11.22□□□□□ -0.61
SPTA1-204ENST00000467387 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
SPTA1-204ENST00000467387 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
SPTA1-204ENST00000467387 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
SPTA1-204ENST00000467387 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
SPTA1-204ENST00000467387 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
SPTA1-204ENST00000467387 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
SPTA1-204ENST00000467387 LAMC1P11047 1609 aa11.2□□□□□ -0.62
SPTA1-204ENST00000467387 ATRNO75882 1429 aa11.2□□□□□ -0.62
SPTA1-204ENST00000467387 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
SPTA1-204ENST00000467387 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
SPTA1-204ENST00000467387 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
SPTA1-204ENST00000467387 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
SPTA1-204ENST00000467387 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
SPTA1-204ENST00000467387 COL22A1Q8NFW1 1626 aaPredicted RBP11.19□□□□□ -0.62
SPTA1-204ENST00000467387 MYOM2P54296 1465 aa11.19□□□□□ -0.62
SPTA1-204ENST00000467387 PRAG1Q86YV5 1406 aa11.18□□□□□ -0.62
SPTA1-204ENST00000467387 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
SPTA1-204ENST00000467387 FNBP4Q8N3X1 1017 aaPredicted RBP11.17□□□□□ -0.62
SPTA1-204ENST00000467387 NAIPQ13075 1403 aa11.17□□□□□ -0.62
SPTA1-204ENST00000467387 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
SPTA1-204ENST00000467387 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
SPTA1-204ENST00000467387 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
SPTA1-204ENST00000467387 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
SPTA1-204ENST00000467387 STK26Q9P289 416 aa11.16□□□□□ -0.62
SPTA1-204ENST00000467387 PXDNQ92626 1479 aa11.16□□□□□ -0.62
SPTA1-204ENST00000467387 FOXO3O43524 673 aa11.15□□□□□ -0.62
SPTA1-204ENST00000467387 PPLO60437 1756 aa11.15□□□□□ -0.62
SPTA1-204ENST00000467387 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
SPTA1-204ENST00000467387 BCL9LQ86UU0 1499 aa11.13□□□□□ -0.63
SPTA1-204ENST00000467387 MARF1Q9Y4F3 1742 aaKnown RBP11.13□□□□□ -0.63
SPTA1-204ENST00000467387 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
SPTA1-204ENST00000467387 G3V3G9 751 aa11.13□□□□□ -0.63
SPTA1-204ENST00000467387 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
SPTA1-204ENST00000467387 LHX8Q68G74 356 aa11.13□□□□□ -0.63
SPTA1-204ENST00000467387 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
SPTA1-204ENST00000467387 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
SPTA1-204ENST00000467387 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
SPTA1-204ENST00000467387 A0A0G2JS52 829 aa11.12□□□□□ -0.63
SPTA1-204ENST00000467387 MYT1Q01538 1121 aa11.12□□□□□ -0.63
SPTA1-204ENST00000467387 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
SPTA1-204ENST00000467387 EP400Q96L91 3159 aa11.12□□□□□ -0.63
SPTA1-204ENST00000467387 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
SPTA1-204ENST00000467387 BLMP54132 1417 aaPredicted RBP11.11□□□□□ -0.63
SPTA1-204ENST00000467387 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
SPTA1-204ENST00000467387 UNC5CLQ8IV45 518 aa11.11□□□□□ -0.63
SPTA1-204ENST00000467387 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
SPTA1-204ENST00000467387 TECPR2O15040 1411 aa11.1□□□□□ -0.63
SPTA1-204ENST00000467387 USP32Q8NFA0 1604 aa11.1□□□□□ -0.63
SPTA1-204ENST00000467387 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
SPTA1-204ENST00000467387 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms