RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NUBP1P53384 320 aa12.84□□□□□ -0.35
APOBEC1-202ENST00000467171 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
APOBEC1-202ENST00000467171 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
APOBEC1-202ENST00000467171 NSD2O96028 1365 aa12.83□□□□□ -0.36
APOBEC1-202ENST00000467171 SAFB2Q14151 953 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOBEC1-202ENST00000467171 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
APOBEC1-202ENST00000467171 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
APOBEC1-202ENST00000467171 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
APOBEC1-202ENST00000467171 MAP3K13O43283 966 aa12.82□□□□□ -0.36
APOBEC1-202ENST00000467171 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
APOBEC1-202ENST00000467171 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
APOBEC1-202ENST00000467171 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
APOBEC1-202ENST00000467171 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 WAPLQ7Z5K2 1190 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 BCANQ96GW7 911 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 CPS1P31327 1500 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
APOBEC1-202ENST00000467171 WASLO00401 505 aaPredicted RBP12.8□□□□□ -0.36
APOBEC1-202ENST00000467171 C7P10643 843 aa12.8□□□□□ -0.36
APOBEC1-202ENST00000467171 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
APOBEC1-202ENST00000467171 USP32Q8NFA0 1604 aa12.79□□□□□ -0.36
APOBEC1-202ENST00000467171 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
APOBEC1-202ENST00000467171 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
APOBEC1-202ENST00000467171 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
APOBEC1-202ENST00000467171 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
APOBEC1-202ENST00000467171 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
APOBEC1-202ENST00000467171 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
APOBEC1-202ENST00000467171 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
APOBEC1-202ENST00000467171 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 PTCH1Q13635 1447 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 ATP7BP35670 1465 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
APOBEC1-202ENST00000467171 TIE1P35590 1138 aa12.76□□□□□ -0.37
APOBEC1-202ENST00000467171 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
APOBEC1-202ENST00000467171 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
APOBEC1-202ENST00000467171 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
APOBEC1-202ENST00000467171 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
APOBEC1-202ENST00000467171 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
APOBEC1-202ENST00000467171 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
APOBEC1-202ENST00000467171 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
APOBEC1-202ENST00000467171 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
APOBEC1-202ENST00000467171 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
APOBEC1-202ENST00000467171 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
APOBEC1-202ENST00000467171 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
APOBEC1-202ENST00000467171 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
APOBEC1-202ENST00000467171 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
APOBEC1-202ENST00000467171 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
APOBEC1-202ENST00000467171 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
APOBEC1-202ENST00000467171 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
APOBEC1-202ENST00000467171 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
APOBEC1-202ENST00000467171 FYB1O15117 783 aa12.71□□□□□ -0.37
APOBEC1-202ENST00000467171 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
APOBEC1-202ENST00000467171 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
APOBEC1-202ENST00000467171 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
APOBEC1-202ENST00000467171 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
APOBEC1-202ENST00000467171 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
APOBEC1-202ENST00000467171 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
APOBEC1-202ENST00000467171 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
APOBEC1-202ENST00000467171 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
APOBEC1-202ENST00000467171 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
APOBEC1-202ENST00000467171 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 NEFLP07196 543 aa12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 MTHFSP49914 203 aa12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
APOBEC1-202ENST00000467171 XRN1Q8IZH2 1706 aaKnown RBP12.66□□□□□ -0.38
APOBEC1-202ENST00000467171 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
APOBEC1-202ENST00000467171 ANKARQ7Z5J8 1434 aa12.66□□□□□ -0.38
APOBEC1-202ENST00000467171 KCNA6P17658 529 aa12.66□□□□□ -0.38
APOBEC1-202ENST00000467171 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
APOBEC1-202ENST00000467171 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
APOBEC1-202ENST00000467171 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
APOBEC1-202ENST00000467171 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
APOBEC1-202ENST00000467171 AATKQ6ZMQ8 1374 aa12.64□□□□□ -0.39
APOBEC1-202ENST00000467171 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
APOBEC1-202ENST00000467171 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
APOBEC1-202ENST00000467171 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
APOBEC1-202ENST00000467171 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
APOBEC1-202ENST00000467171 ACEP12821 1306 aa12.61□□□□□ -0.39
APOBEC1-202ENST00000467171 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 USP6P35125 1406 aa12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
APOBEC1-202ENST00000467171 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
APOBEC1-202ENST00000467171 APAF1O14727 1248 aa12.59□□□□□ -0.39
APOBEC1-202ENST00000467171 NME9Q86XW9 330 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms