RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
C9orf135-202ENST00000466872 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
C9orf135-202ENST00000466872 BCANQ96GW7 911 aa14.19□□□□□ -0.14
C9orf135-202ENST00000466872 AMOTL2Q9Y2J4 779 aa14.19□□□□□ -0.14
C9orf135-202ENST00000466872 ROBO2Q9HCK4 1378 aa14.18□□□□□ -0.14
C9orf135-202ENST00000466872 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
C9orf135-202ENST00000466872 LHX8Q68G74 356 aa14.17□□□□□ -0.14
C9orf135-202ENST00000466872 PROSER2Q86WR7 435 aaPredicted RBP14.17□□□□□ -0.14
C9orf135-202ENST00000466872 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
C9orf135-202ENST00000466872 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
C9orf135-202ENST00000466872 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
C9orf135-202ENST00000466872 DCCP43146 1447 aa14.15□□□□□ -0.14
C9orf135-202ENST00000466872 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
C9orf135-202ENST00000466872 LRPPRCP42704 1394 aaKnown RBP14.14□□□□□ -0.15
C9orf135-202ENST00000466872 TOM1O60784 492 aa14.14□□□□□ -0.15
C9orf135-202ENST00000466872 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
C9orf135-202ENST00000466872 FBXO22Q8NEZ5 403 aa14.14□□□□□ -0.15
C9orf135-202ENST00000466872 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
C9orf135-202ENST00000466872 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
C9orf135-202ENST00000466872 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
C9orf135-202ENST00000466872 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
C9orf135-202ENST00000466872 DLC1Q96QB1 1528 aa14.13□□□□□ -0.15
C9orf135-202ENST00000466872 YTHDC2Q9H6S0 1430 aaKnown RBP14.13□□□□□ -0.15
C9orf135-202ENST00000466872 MSH6P52701 1360 aa14.12□□□□□ -0.15
C9orf135-202ENST00000466872 ABCC11Q96J66 1382 aa14.12□□□□□ -0.15
C9orf135-202ENST00000466872 MST1RQ04912 1400 aa14.12□□□□□ -0.15
C9orf135-202ENST00000466872 CDC42BPGQ6DT37 1551 aa14.12□□□□□ -0.15
C9orf135-202ENST00000466872 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
C9orf135-202ENST00000466872 NLRP6P59044 892 aa14.11□□□□□ -0.15
C9orf135-202ENST00000466872 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
C9orf135-202ENST00000466872 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
C9orf135-202ENST00000466872 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
C9orf135-202ENST00000466872 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
C9orf135-202ENST00000466872 COL16A1Q07092 1604 aaPredicted RBP14.09□□□□□ -0.15
C9orf135-202ENST00000466872 AHDC1Q5TGY3 1603 aaPredicted RBP14.09□□□□□ -0.15
C9orf135-202ENST00000466872 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
C9orf135-202ENST00000466872 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
C9orf135-202ENST00000466872 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
C9orf135-202ENST00000466872 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.15
C9orf135-202ENST00000466872 HSPA1LP34931 641 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 DCAF11Q8TEB1 546 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 STAC3Q96MF2 364 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 C19orf44Q9H6X5 657 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 ADGRB2O60241 1585 aa14.08□□□□□ -0.16
C9orf135-202ENST00000466872 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
C9orf135-202ENST00000466872 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
C9orf135-202ENST00000466872 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
C9orf135-202ENST00000466872 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
C9orf135-202ENST00000466872 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
C9orf135-202ENST00000466872 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
C9orf135-202ENST00000466872 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
C9orf135-202ENST00000466872 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
C9orf135-202ENST00000466872 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
C9orf135-202ENST00000466872 WAPLQ7Z5K2 1190 aa14.03□□□□□ -0.16
C9orf135-202ENST00000466872 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
C9orf135-202ENST00000466872 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
C9orf135-202ENST00000466872 MED1Q15648 1581 aaPredicted RBP14.01□□□□□ -0.17
C9orf135-202ENST00000466872 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
C9orf135-202ENST00000466872 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
C9orf135-202ENST00000466872 STK26Q9P289 416 aa14.01□□□□□ -0.17
C9orf135-202ENST00000466872 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
C9orf135-202ENST00000466872 ATF3P18847 181 aa13.99□□□□□ -0.17
C9orf135-202ENST00000466872 NBPF1Q3BBV0 1214 aa13.99□□□□□ -0.17
C9orf135-202ENST00000466872 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
C9orf135-202ENST00000466872 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
C9orf135-202ENST00000466872 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
C9orf135-202ENST00000466872 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
C9orf135-202ENST00000466872 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
C9orf135-202ENST00000466872 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
C9orf135-202ENST00000466872 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
C9orf135-202ENST00000466872 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
C9orf135-202ENST00000466872 KIF1AQ12756 1690 aa13.97□□□□□ -0.17
C9orf135-202ENST00000466872 TOPAZ1Q8N9V7 1692 aa13.97□□□□□ -0.17
C9orf135-202ENST00000466872 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
C9orf135-202ENST00000466872 PPP1R37O75864 691 aa13.96□□□□□ -0.17
C9orf135-202ENST00000466872 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
C9orf135-202ENST00000466872 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
C9orf135-202ENST00000466872 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.17
C9orf135-202ENST00000466872 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
C9orf135-202ENST00000466872 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
C9orf135-202ENST00000466872 TRAK1Q9UPV9 953 aa13.95□□□□□ -0.18
C9orf135-202ENST00000466872 PXDNQ92626 1479 aa13.94□□□□□ -0.18
C9orf135-202ENST00000466872 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
C9orf135-202ENST00000466872 TULP4Q9NRJ4 1543 aa13.94□□□□□ -0.18
C9orf135-202ENST00000466872 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
C9orf135-202ENST00000466872 LRP6O75581 1613 aa13.93□□□□□ -0.18
C9orf135-202ENST00000466872 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
C9orf135-202ENST00000466872 ATP7BP35670 1465 aa13.93□□□□□ -0.18
C9orf135-202ENST00000466872 ANKARQ7Z5J8 1434 aa13.92□□□□□ -0.18
C9orf135-202ENST00000466872 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
C9orf135-202ENST00000466872 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
C9orf135-202ENST00000466872 PRR36Q9H6K5 1346 aa13.91□□□□□ -0.18
C9orf135-202ENST00000466872 ITSN1Q15811 1721 aa13.91□□□□□ -0.18
C9orf135-202ENST00000466872 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
C9orf135-202ENST00000466872 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
C9orf135-202ENST00000466872 G3V3G9 751 aa13.9□□□□□ -0.18
C9orf135-202ENST00000466872 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
C9orf135-202ENST00000466872 JCADQ9P266 1359 aa13.9□□□□□ -0.18
C9orf135-202ENST00000466872 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms