RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
VPS13D-203ENST00000466732 BAP1Q92560 729 aa8.79□□□□□ -1
VPS13D-203ENST00000466732 LINC01559Q495D7 138 aa8.78□□□□□ -1
VPS13D-203ENST00000466732 WNT7AO00755 349 aa8.77□□□□□ -1.01
VPS13D-203ENST00000466732 NRG2O14511 850 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-203ENST00000466732 SH3BP2P78314 561 aa8.77□□□□□ -1.01
VPS13D-203ENST00000466732 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
VPS13D-203ENST00000466732 RC3H1Q5TC82 1133 aaKnown RBP8.76□□□□□ -1.01
VPS13D-203ENST00000466732 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
VPS13D-203ENST00000466732 NR6A1Q15406 480 aa8.75□□□□□ -1.01
VPS13D-203ENST00000466732 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
VPS13D-203ENST00000466732 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
VPS13D-203ENST00000466732 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
VPS13D-203ENST00000466732 CYP4X1Q8N118 509 aa8.72□□□□□ -1.01
VPS13D-203ENST00000466732 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
VPS13D-203ENST00000466732 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
VPS13D-203ENST00000466732 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
VPS13D-203ENST00000466732 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
VPS13D-203ENST00000466732 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
VPS13D-203ENST00000466732 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
VPS13D-203ENST00000466732 FOXJ1Q92949 421 aa8.71□□□□□ -1.02
VPS13D-203ENST00000466732 Q6ZNB5 142 aa8.7□□□□□ -1.02
VPS13D-203ENST00000466732 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
VPS13D-203ENST00000466732 TRIM34Q9BYJ4 488 aa8.7□□□□□ -1.02
VPS13D-203ENST00000466732 FKBPLQ9UIM3 349 aa8.7□□□□□ -1.02
VPS13D-203ENST00000466732 TTC24A2A3L6 582 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-203ENST00000466732 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
VPS13D-203ENST00000466732 SIAH2O43255 324 aa8.69□□□□□ -1.02
VPS13D-203ENST00000466732 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
VPS13D-203ENST00000466732 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
VPS13D-203ENST00000466732 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-203ENST00000466732 SNRKQ9NRH2 765 aa8.69□□□□□ -1.02
VPS13D-203ENST00000466732 AGERQ15109 404 aa8.68□□□□□ -1.02
VPS13D-203ENST00000466732 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
VPS13D-203ENST00000466732 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
VPS13D-203ENST00000466732 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-203ENST00000466732 DGAT1O75907 488 aa8.67□□□□□ -1.02
VPS13D-203ENST00000466732 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
VPS13D-203ENST00000466732 MTMR14Q8NCE2 650 aa8.67□□□□□ -1.02
VPS13D-203ENST00000466732 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
VPS13D-203ENST00000466732 J3QL48 77 aa8.66□□□□□ -1.02
VPS13D-203ENST00000466732 PKDCCQ504Y2 493 aa8.66□□□□□ -1.02
VPS13D-203ENST00000466732 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
VPS13D-203ENST00000466732 PNMA1Q8ND90 353 aa8.66□□□□□ -1.02
VPS13D-203ENST00000466732 SOCS7O14512 581 aa8.65□□□□□ -1.02
VPS13D-203ENST00000466732 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
VPS13D-203ENST00000466732 SMPD1P17405 629 aa8.65□□□□□ -1.02
VPS13D-203ENST00000466732 FAM174AQ8TBP5 190 aa8.65□□□□□ -1.02
VPS13D-203ENST00000466732 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
VPS13D-203ENST00000466732 TLL2Q9Y6L7 1015 aa8.64□□□□□ -1.03
VPS13D-203ENST00000466732 LCE2BO14633 110 aa8.63□□□□□ -1.03
VPS13D-203ENST00000466732 MPNDQ8N594 471 aa8.63□□□□□ -1.03
VPS13D-203ENST00000466732 ARHGAP9Q9BRR9 750 aa8.63□□□□□ -1.03
VPS13D-203ENST00000466732 C1QTNF2Q9BXJ5 285 aa8.63□□□□□ -1.03
VPS13D-203ENST00000466732 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
VPS13D-203ENST00000466732 PTK2Q05397 1052 aa8.62□□□□□ -1.03
VPS13D-203ENST00000466732 OCSTAMPQ9BR26 566 aa8.62□□□□□ -1.03
VPS13D-203ENST00000466732 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
VPS13D-203ENST00000466732 APBB1O00213 710 aa8.61□□□□□ -1.03
VPS13D-203ENST00000466732 MYT1Q01538 1121 aa8.61□□□□□ -1.03
VPS13D-203ENST00000466732 TRAF7Q6Q0C0 670 aa8.61□□□□□ -1.03
VPS13D-203ENST00000466732 NDUFB9Q9Y6M9 179 aa8.61□□□□□ -1.03
VPS13D-203ENST00000466732 AVPP01185 164 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 ERFEQ4G0M1 354 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 TRMT44Q8IYL2 757 aaKnown RBP8.6□□□□□ -1.03
VPS13D-203ENST00000466732 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
VPS13D-203ENST00000466732 GPR37L1O60883 481 aa8.59□□□□□ -1.03
VPS13D-203ENST00000466732 MCM6Q14566 821 aa8.59□□□□□ -1.03
VPS13D-203ENST00000466732 HPS1Q92902 700 aa8.59□□□□□ -1.03
VPS13D-203ENST00000466732 ADH1CP00326 375 aa8.58□□□□□ -1.04
VPS13D-203ENST00000466732 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
VPS13D-203ENST00000466732 MAP4K5Q9Y4K4 846 aa8.57□□□□□ -1.04
VPS13D-203ENST00000466732 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 ST8SIA5O15466 376 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 GRM5P41594 1212 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-203ENST00000466732 NNTQ13423 1086 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-203ENST00000466732 CRIPAKQ8N1N5 446 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 AAASQ9NRG9 546 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
VPS13D-203ENST00000466732 FBXO45P0C2W1 286 aa8.55□□□□□ -1.04
VPS13D-203ENST00000466732 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
VPS13D-203ENST00000466732 SLC10A4Q96EP9 437 aa8.55□□□□□ -1.04
VPS13D-203ENST00000466732 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
VPS13D-203ENST00000466732 AXIN1O15169 862 aa8.54□□□□□ -1.04
VPS13D-203ENST00000466732 NR5A1Q13285 461 aa8.54□□□□□ -1.04
VPS13D-203ENST00000466732 NR3C2P08235 984 aa8.53□□□□□ -1.04
VPS13D-203ENST00000466732 FSHRP23945 695 aa8.53□□□□□ -1.04
VPS13D-203ENST00000466732 FLIIQ13045 1269 aa8.53□□□□□ -1.04
VPS13D-203ENST00000466732 NR1H3Q13133 447 aa8.53□□□□□ -1.04
VPS13D-203ENST00000466732 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
VPS13D-203ENST00000466732 CDV3Q9UKY7 258 aaKnown RBP8.53□□□□□ -1.04
VPS13D-203ENST00000466732 DZIP3Q86Y13 1208 aaKnown RBP8.52□□□□□ -1.05
VPS13D-203ENST00000466732 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-203ENST00000466732 IRF5Q13568 498 aa8.51□□□□□ -1.05
VPS13D-203ENST00000466732 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms