RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
SRPRB-202ENST00000466636 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
SRPRB-202ENST00000466636 BLMP54132 1417 aaPredicted RBP12.81□□□□□ -0.36
SRPRB-202ENST00000466636 HSPA2P54652 639 aa12.81□□□□□ -0.36
SRPRB-202ENST00000466636 CHD2O14647 1828 aaKnown RBP12.81□□□□□ -0.36
SRPRB-202ENST00000466636 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
SRPRB-202ENST00000466636 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
SRPRB-202ENST00000466636 ACEP12821 1306 aa12.79□□□□□ -0.36
SRPRB-202ENST00000466636 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
SRPRB-202ENST00000466636 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
SRPRB-202ENST00000466636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■■■■□ 21
SRPRB-202ENST00000466636 USP6P35125 1406 aa12.78□□□□□ -0.36
SRPRB-202ENST00000466636 SSH2Q76I76 1423 aa12.78□□□□□ -0.36
SRPRB-202ENST00000466636 NME9Q86XW9 330 aa12.77□□□□□ -0.37
SRPRB-202ENST00000466636 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
SRPRB-202ENST00000466636 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 MTHFSP49914 203 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRPRB-202ENST00000466636 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
SRPRB-202ENST00000466636 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
SRPRB-202ENST00000466636 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
SRPRB-202ENST00000466636 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
SRPRB-202ENST00000466636 COL3A1P02461 1466 aaPredicted RBP12.74□□□□□ -0.37
SRPRB-202ENST00000466636 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
SRPRB-202ENST00000466636 PMFBP1Q8TBY8 1022 aa12.74□□□□□ -0.37
SRPRB-202ENST00000466636 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
SRPRB-202ENST00000466636 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
SRPRB-202ENST00000466636 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
SRPRB-202ENST00000466636 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
SRPRB-202ENST00000466636 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 ITSN1Q15811 1721 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
SRPRB-202ENST00000466636 TMEM94Q12767 1356 aa12.71□□□□□ -0.37
SRPRB-202ENST00000466636 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
SRPRB-202ENST00000466636 COG3Q96JB2 828 aa12.71□□□□□ -0.37
SRPRB-202ENST00000466636 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.37
SRPRB-202ENST00000466636 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
SRPRB-202ENST00000466636 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
SRPRB-202ENST00000466636 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
SRPRB-202ENST00000466636 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
SRPRB-202ENST00000466636 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
SRPRB-202ENST00000466636 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
SRPRB-202ENST00000466636 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
SRPRB-202ENST00000466636 DCCP43146 1447 aa12.69□□□□□ -0.38
SRPRB-202ENST00000466636 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
SRPRB-202ENST00000466636 FBLN1P23142 703 aa12.68□□□□□ -0.38
SRPRB-202ENST00000466636 C1orf167Q5SNV9 1468 aa12.67□□□□□ -0.38
SRPRB-202ENST00000466636 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
SRPRB-202ENST00000466636 STRCP1A6NGW2 1772 aa12.67□□□□□ -0.38
SRPRB-202ENST00000466636 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
SRPRB-202ENST00000466636 MST1RQ04912 1400 aa12.66□□□□□ -0.38
SRPRB-202ENST00000466636 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
SRPRB-202ENST00000466636 ESCO1Q5FWF5 840 aa12.66□□□□□ -0.38
SRPRB-202ENST00000466636 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
SRPRB-202ENST00000466636 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
SRPRB-202ENST00000466636 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
SRPRB-202ENST00000466636 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
SRPRB-202ENST00000466636 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
SRPRB-202ENST00000466636 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
SRPRB-202ENST00000466636 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
SRPRB-202ENST00000466636 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
SRPRB-202ENST00000466636 APAF1O14727 1248 aa12.64□□□□□ -0.39
SRPRB-202ENST00000466636 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
SRPRB-202ENST00000466636 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
SRPRB-202ENST00000466636 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
SRPRB-202ENST00000466636 U2AF1L5P0DN76 240 aaPredicted RBP12.63□□□□□ -0.39
SRPRB-202ENST00000466636 ATF3P18847 181 aa12.63□□□□□ -0.39
SRPRB-202ENST00000466636 U2AF1Q01081 240 aaKnown RBP eCLIP12.63□□□□□ -0.39
SRPRB-202ENST00000466636 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
SRPRB-202ENST00000466636 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
SRPRB-202ENST00000466636 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
SRPRB-202ENST00000466636 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
SRPRB-202ENST00000466636 IL13P35225 146 aa12.62□□□□□ -0.39
SRPRB-202ENST00000466636 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 MSH6P52701 1360 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SRPRB-202ENST00000466636 NLRP6P59044 892 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 PSME1Q06323 249 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SRPRB-202ENST00000466636 ABTB2Q8N961 1025 aa12.6□□□□□ -0.39
SRPRB-202ENST00000466636 KIF1AQ12756 1690 aa12.6□□□□□ -0.39
SRPRB-202ENST00000466636 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
SRPRB-202ENST00000466636 FOXO3O43524 673 aa12.59□□□□□ -0.39
SRPRB-202ENST00000466636 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
SRPRB-202ENST00000466636 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
SRPRB-202ENST00000466636 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
SRPRB-202ENST00000466636 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
SRPRB-202ENST00000466636 FCHSD2O94868 740 aa12.58□□□□□ -0.4
SRPRB-202ENST00000466636 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
SRPRB-202ENST00000466636 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms