RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 NSD2O96028 1365 aa19.22■□□□□ 0.67
GAPDH-206ENST00000466525 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
GAPDH-206ENST00000466525 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
GAPDH-206ENST00000466525 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
GAPDH-206ENST00000466525 CFAP70Q5T0N1 1121 aa19.2■□□□□ 0.66
GAPDH-206ENST00000466525 LTKP29376 864 aa19.2■□□□□ 0.66
GAPDH-206ENST00000466525 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
GAPDH-206ENST00000466525 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 UBR1Q8IWV7 1749 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 NSD3Q9BZ95 1437 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
GAPDH-206ENST00000466525 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
GAPDH-206ENST00000466525 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
GAPDH-206ENST00000466525 KCNA6P17658 529 aa19.17■□□□□ 0.66
GAPDH-206ENST00000466525 L1TD1Q5T7N2 865 aaKnown RBP19.17■□□□□ 0.66
GAPDH-206ENST00000466525 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
GAPDH-206ENST00000466525 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
GAPDH-206ENST00000466525 PANK1Q8TE04 598 aa19.16■□□□□ 0.66
GAPDH-206ENST00000466525 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
GAPDH-206ENST00000466525 RPGRIP1LQ68CZ1 1315 aa19.15■□□□□ 0.66
GAPDH-206ENST00000466525 MORC1Q86VD1 984 aa19.14■□□□□ 0.66
GAPDH-206ENST00000466525 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.66
GAPDH-206ENST00000466525 TMEM2Q9UHN6 1383 aa19.14■□□□□ 0.65
GAPDH-206ENST00000466525 SEC24BO95487 1268 aa19.14■□□□□ 0.65
GAPDH-206ENST00000466525 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
GAPDH-206ENST00000466525 TMEM94Q12767 1356 aa19.13■□□□□ 0.65
GAPDH-206ENST00000466525 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
GAPDH-206ENST00000466525 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
GAPDH-206ENST00000466525 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
GAPDH-206ENST00000466525 PCDHB15Q9Y5E8 787 aa19.11■□□□□ 0.65
GAPDH-206ENST00000466525 NOS1P29475 1434 aa19.11■□□□□ 0.65
GAPDH-206ENST00000466525 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
GAPDH-206ENST00000466525 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
GAPDH-206ENST00000466525 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
GAPDH-206ENST00000466525 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
GAPDH-206ENST00000466525 ANKRD26Q9UPS8 1709 aa19.1■□□□□ 0.65
GAPDH-206ENST00000466525 ANKRD36BQ8N2N9 1353 aa19.09■□□□□ 0.65
GAPDH-206ENST00000466525 PRKCSHP14314 528 aaPredicted RBP19.09■□□□□ 0.65
GAPDH-206ENST00000466525 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
GAPDH-206ENST00000466525 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
GAPDH-206ENST00000466525 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
GAPDH-206ENST00000466525 PIK3C2BO00750 1634 aa19.08■□□□□ 0.64
GAPDH-206ENST00000466525 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.64
GAPDH-206ENST00000466525 RLBP1P12271 317 aa19.07■□□□□ 0.64
GAPDH-206ENST00000466525 TBC1D2Q9BYX2 928 aa19.07■□□□□ 0.64
GAPDH-206ENST00000466525 MSH6P52701 1360 aa19.07■□□□□ 0.64
GAPDH-206ENST00000466525 JCADQ9P266 1359 aa19.07■□□□□ 0.64
GAPDH-206ENST00000466525 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
GAPDH-206ENST00000466525 IL16Q14005 1332 aa19.06■□□□□ 0.64
GAPDH-206ENST00000466525 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
GAPDH-206ENST00000466525 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
GAPDH-206ENST00000466525 POGKQ9P215 609 aa19.05■□□□□ 0.64
GAPDH-206ENST00000466525 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
GAPDH-206ENST00000466525 SLAIN2Q9P270 581 aa19.04■□□□□ 0.64
GAPDH-206ENST00000466525 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
GAPDH-206ENST00000466525 ROBO1Q9Y6N7 1651 aa19.04■□□□□ 0.64
GAPDH-206ENST00000466525 IDI1Q13907 227 aa19.03■□□□□ 0.64
GAPDH-206ENST00000466525 FSD2A1L4K1 749 aa19.03■□□□□ 0.64
GAPDH-206ENST00000466525 MTHFSP49914 203 aa19.03■□□□□ 0.64
GAPDH-206ENST00000466525 DZIP1LQ8IYY4 767 aaKnown RBP19.03■□□□□ 0.64
GAPDH-206ENST00000466525 ISY1Q9ULR0 285 aaKnown RBP19.03■□□□□ 0.64
GAPDH-206ENST00000466525 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.64
GAPDH-206ENST00000466525 SLC12A5Q9H2X9 1139 aa19.02■□□□□ 0.63
GAPDH-206ENST00000466525 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
GAPDH-206ENST00000466525 EVC2Q86UK5 1308 aa19.01■□□□□ 0.63
GAPDH-206ENST00000466525 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
GAPDH-206ENST00000466525 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
GAPDH-206ENST00000466525 CHMP5Q9NZZ3 219 aa19.01■□□□□ 0.63
GAPDH-206ENST00000466525 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
GAPDH-206ENST00000466525 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
GAPDH-206ENST00000466525 ZFYVE9O95405 1425 aa19■□□□□ 0.63
GAPDH-206ENST00000466525 MCM4P33991 863 aa19■□□□□ 0.63
GAPDH-206ENST00000466525 SMC5Q8IY18 1101 aa19■□□□□ 0.63
GAPDH-206ENST00000466525 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
GAPDH-206ENST00000466525 CDC42BPGQ6DT37 1551 aa18.99■□□□□ 0.63
GAPDH-206ENST00000466525 NEXMIFQ5QGS0 1516 aa18.98■□□□□ 0.63
GAPDH-206ENST00000466525 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
GAPDH-206ENST00000466525 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
GAPDH-206ENST00000466525 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
GAPDH-206ENST00000466525 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
GAPDH-206ENST00000466525 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
GAPDH-206ENST00000466525 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
GAPDH-206ENST00000466525 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
GAPDH-206ENST00000466525 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
GAPDH-206ENST00000466525 SNX21Q969T3 373 aa18.95■□□□□ 0.62
GAPDH-206ENST00000466525 GOLGA6L3A6NEY3 463 aa18.94■□□□□ 0.62
GAPDH-206ENST00000466525 RBM25P49756 843 aaKnown RBP18.94■□□□□ 0.62
GAPDH-206ENST00000466525 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
GAPDH-206ENST00000466525 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
GAPDH-206ENST00000466525 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
GAPDH-206ENST00000466525 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
GAPDH-206ENST00000466525 DDX11L8A8MPP1 907 aa18.94■□□□□ 0.62
GAPDH-206ENST00000466525 ATF7IPQ6VMQ6 1270 aa18.94■□□□□ 0.62
GAPDH-206ENST00000466525 PNNQ9H307 717 aaKnown RBP18.94■□□□□ 0.62
GAPDH-206ENST00000466525 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
GAPDH-206ENST00000466525 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
GAPDH-206ENST00000466525 KIF16BQ96L93 1317 aa18.93■□□□□ 0.62
GAPDH-206ENST00000466525 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms