RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
APP-214ENST00000466453 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
APP-214ENST00000466453 ADCY9O60503 1353 aa12.46□□□□□ -0.41
APP-214ENST00000466453 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
APP-214ENST00000466453 PLSCR1O15162 318 aa12.46□□□□□ -0.41
APP-214ENST00000466453 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
APP-214ENST00000466453 WWC3Q9ULE0 1092 aa12.46□□□□□ -0.41
APP-214ENST00000466453 WDR90Q96KV7 1748 aa12.45□□□□□ -0.42
APP-214ENST00000466453 E9PCH4 1651 aa12.45□□□□□ -0.42
APP-214ENST00000466453 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
APP-214ENST00000466453 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
APP-214ENST00000466453 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
APP-214ENST00000466453 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
APP-214ENST00000466453 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
APP-214ENST00000466453 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
APP-214ENST00000466453 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
APP-214ENST00000466453 KLRG1Q96E93 195 aa12.42□□□□□ -0.42
APP-214ENST00000466453 NAIPQ13075 1403 aa12.42□□□□□ -0.42
APP-214ENST00000466453 ANKRD30AQ9BXX3 1397 aa12.42□□□□□ -0.42
APP-214ENST00000466453 FMN2Q9NZ56 1722 aa12.41□□□□□ -0.42
APP-214ENST00000466453 PEAK1Q9H792 1746 aa12.4□□□□□ -0.42
APP-214ENST00000466453 TECPR2O15040 1411 aa12.4□□□□□ -0.42
APP-214ENST00000466453 DAPK1P53355 1430 aa12.4□□□□□ -0.42
APP-214ENST00000466453 KIF3CO14782 793 aa12.4□□□□□ -0.42
APP-214ENST00000466453 PSME1Q06323 249 aa12.4□□□□□ -0.42
APP-214ENST00000466453 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
APP-214ENST00000466453 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
APP-214ENST00000466453 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
APP-214ENST00000466453 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
APP-214ENST00000466453 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
APP-214ENST00000466453 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
APP-214ENST00000466453 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
APP-214ENST00000466453 PROM2Q8N271 834 aa12.39□□□□□ -0.43
APP-214ENST00000466453 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
APP-214ENST00000466453 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
APP-214ENST00000466453 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
APP-214ENST00000466453 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
APP-214ENST00000466453 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
APP-214ENST00000466453 OVOS2A0A0G2JMS6 1433 aa12.36□□□□□ -0.43
APP-214ENST00000466453 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
APP-214ENST00000466453 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
APP-214ENST00000466453 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
APP-214ENST00000466453 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
APP-214ENST00000466453 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
APP-214ENST00000466453 PDE4DIPQ5VU43 2346 aa12.35□□□□□ -0.43
APP-214ENST00000466453 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
APP-214ENST00000466453 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
APP-214ENST00000466453 ALS2Q96Q42 1657 aa12.34□□□□□ -0.43
APP-214ENST00000466453 TRPM3Q9HCF6 1732 aaPredicted RBP12.34□□□□□ -0.43
APP-214ENST00000466453 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
APP-214ENST00000466453 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
APP-214ENST00000466453 TOPAZ1Q8N9V7 1692 aa12.32□□□□□ -0.44
APP-214ENST00000466453 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
APP-214ENST00000466453 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
APP-214ENST00000466453 ARHGEF28Q8N1W1 1705 aaKnown RBP12.31□□□□□ -0.44
APP-214ENST00000466453 TOMM70O94826 608 aa12.31□□□□□ -0.44
APP-214ENST00000466453 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
APP-214ENST00000466453 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
APP-214ENST00000466453 CHIC2Q9UKJ5 165 aa12.31□□□□□ -0.44
APP-214ENST00000466453 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
APP-214ENST00000466453 ATP7BP35670 1465 aa12.3□□□□□ -0.44
APP-214ENST00000466453 HTRA3P83110 453 aa12.3□□□□□ -0.44
APP-214ENST00000466453 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
APP-214ENST00000466453 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
APP-214ENST00000466453 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
APP-214ENST00000466453 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
APP-214ENST00000466453 IFT172Q9UG01 1749 aa12.29□□□□□ -0.44
APP-214ENST00000466453 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
APP-214ENST00000466453 HSPA1AP0DMV8 641 aaKnown RBP12.28□□□□□ -0.44
APP-214ENST00000466453 HSPA1BP0DMV9 641 aaKnown RBP12.28□□□□□ -0.44
APP-214ENST00000466453 TCP11L2Q8N4U5 519 aa12.28□□□□□ -0.44
APP-214ENST00000466453 CLTCL1P53675 1640 aa12.27□□□□□ -0.44
APP-214ENST00000466453 POLD1P28340 1107 aa12.27□□□□□ -0.45
APP-214ENST00000466453 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
APP-214ENST00000466453 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
APP-214ENST00000466453 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
APP-214ENST00000466453 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
APP-214ENST00000466453 BCL9O00512 1426 aa12.25□□□□□ -0.45
APP-214ENST00000466453 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
APP-214ENST00000466453 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
APP-214ENST00000466453 TNRC18O15417 2968 aaPredicted RBP12.24□□□□□ -0.45
APP-214ENST00000466453 WAPLQ7Z5K2 1190 aa12.24□□□□□ -0.45
APP-214ENST00000466453 SLC16A10Q8TF71 515 aa12.24□□□□□ -0.45
APP-214ENST00000466453 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
APP-214ENST00000466453 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
APP-214ENST00000466453 KIF1BO60333 1816 aa12.23□□□□□ -0.45
APP-214ENST00000466453 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
APP-214ENST00000466453 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
APP-214ENST00000466453 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
APP-214ENST00000466453 AKAP12Q02952 1782 aa12.21□□□□□ -0.45
APP-214ENST00000466453 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
APP-214ENST00000466453 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
APP-214ENST00000466453 EVA1CP58658 441 aa12.2□□□□□ -0.46
APP-214ENST00000466453 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
APP-214ENST00000466453 FSTL1Q12841 308 aa12.18□□□□□ -0.46
APP-214ENST00000466453 PMFBP1Q8TBY8 1022 aa12.18□□□□□ -0.46
APP-214ENST00000466453 ABCC11Q96J66 1382 aa12.18□□□□□ -0.46
APP-214ENST00000466453 MLLT1Q03111 559 aaPredicted RBP12.17□□□□□ -0.46
APP-214ENST00000466453 ANKARQ7Z5J8 1434 aa12.17□□□□□ -0.46
APP-214ENST00000466453 PPLO60437 1756 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms