RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 ACEP12821 1306 aa14.17□□□□□ -0.14
PDZRN3-204ENST00000466348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDZRN3-204ENST00000466348 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
PDZRN3-204ENST00000466348 USP6P35125 1406 aa14.16□□□□□ -0.14
PDZRN3-204ENST00000466348 APAF1O14727 1248 aa14.16□□□□□ -0.14
PDZRN3-204ENST00000466348 DIAPH1O60610 1272 aaKnown RBP14.16□□□□□ -0.14
PDZRN3-204ENST00000466348 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.14
PDZRN3-204ENST00000466348 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-204ENST00000466348 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
PDZRN3-204ENST00000466348 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
PDZRN3-204ENST00000466348 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
PDZRN3-204ENST00000466348 COL3A1P02461 1466 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 E9PSI1 815 aa14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 FCHSD2O94868 740 aa14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
PDZRN3-204ENST00000466348 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 NME9Q86XW9 330 aa14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
PDZRN3-204ENST00000466348 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 CCDC146Q8IYE0 955 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 NGDNQ8NEJ9 315 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 NWD1Q149M9 1564 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 FMN2Q9NZ56 1722 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
PDZRN3-204ENST00000466348 NEFMP07197 916 aa14.11□□□□□ -0.15
PDZRN3-204ENST00000466348 DUSP27Q5VZP5 1158 aa14.11□□□□□ -0.15
PDZRN3-204ENST00000466348 NRKQ7Z2Y5 1582 aa14.11□□□□□ -0.15
PDZRN3-204ENST00000466348 CDCA7LQ96GN5 454 aa14.11□□□□□ -0.15
PDZRN3-204ENST00000466348 OVOS2A0A0J9YW53 1432 aa14.1□□□□□ -0.15
PDZRN3-204ENST00000466348 OVOS2Q6IE36 1432 aa14.1□□□□□ -0.15
PDZRN3-204ENST00000466348 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
PDZRN3-204ENST00000466348 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-204ENST00000466348 IQSEC2Q5JU85 1478 aa14.1□□□□□ -0.15
PDZRN3-204ENST00000466348 MAP2P11137 1827 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-204ENST00000466348 PLEKHF1Q96S99 279 aa14.09□□□□□ -0.15
PDZRN3-204ENST00000466348 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-204ENST00000466348 LRRC7Q96NW7 1537 aa14.08□□□□□ -0.16
PDZRN3-204ENST00000466348 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
PDZRN3-204ENST00000466348 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
PDZRN3-204ENST00000466348 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-204ENST00000466348 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
PDZRN3-204ENST00000466348 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
PDZRN3-204ENST00000466348 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
PDZRN3-204ENST00000466348 IL13P35225 146 aa14.06□□□□□ -0.16
PDZRN3-204ENST00000466348 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
PDZRN3-204ENST00000466348 IL16Q14005 1332 aa14.06□□□□□ -0.16
PDZRN3-204ENST00000466348 CT47B1P0C2W7 299 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-204ENST00000466348 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-204ENST00000466348 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-204ENST00000466348 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
PDZRN3-204ENST00000466348 C19orf44Q9H6X5 657 aa14.05□□□□□ -0.16
PDZRN3-204ENST00000466348 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
PDZRN3-204ENST00000466348 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
PDZRN3-204ENST00000466348 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-204ENST00000466348 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
PDZRN3-204ENST00000466348 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 C14orf37Q86TY3 774 aa14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 DCCP43146 1447 aa14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-204ENST00000466348 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
PDZRN3-204ENST00000466348 NLRP6P59044 892 aa14.01□□□□□ -0.17
PDZRN3-204ENST00000466348 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
PDZRN3-204ENST00000466348 FLT4P35916 1363 aa14□□□□□ -0.17
PDZRN3-204ENST00000466348 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
PDZRN3-204ENST00000466348 PSME1Q06323 249 aa14□□□□□ -0.17
PDZRN3-204ENST00000466348 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 RIPK4P57078 832 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 NFE2L2Q16236 605 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 ESCO1Q5FWF5 840 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
PDZRN3-204ENST00000466348 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-204ENST00000466348 RTL1A6NKG5 1358 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 MAP3K19Q56UN5 1328 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 ATF3P18847 181 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 FBLN1P23142 703 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 EIF4A2Q14240 407 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 KIF1AQ12756 1690 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 MST1RQ04912 1400 aa13.97□□□□□ -0.17
PDZRN3-204ENST00000466348 PIK3C2AO00443 1686 aa13.96□□□□□ -0.17
PDZRN3-204ENST00000466348 AMPHP49418 695 aa13.96□□□□□ -0.17
PDZRN3-204ENST00000466348 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
PDZRN3-204ENST00000466348 ARHGEF10O15013 1369 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms