RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 CLSTN1O94985 981 aa11.72□□□□□ -0.53
CDHR3-203ENST00000466045 PLCD4Q9BRC7 762 aa11.72□□□□□ -0.53
CDHR3-203ENST00000466045 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
CDHR3-203ENST00000466045 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
CDHR3-203ENST00000466045 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
CDHR3-203ENST00000466045 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-203ENST00000466045 PKD2Q13563 968 aa11.71□□□□□ -0.53
CDHR3-203ENST00000466045 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
CDHR3-203ENST00000466045 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-203ENST00000466045 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.53
CDHR3-203ENST00000466045 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.53
CDHR3-203ENST00000466045 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.54
CDHR3-203ENST00000466045 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.54
CDHR3-203ENST00000466045 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.54
CDHR3-203ENST00000466045 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.54
CDHR3-203ENST00000466045 SIRT1Q96EB6 747 aa11.71□□□□□ -0.54
CDHR3-203ENST00000466045 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.54
CDHR3-203ENST00000466045 FEZ2Q9UHY8 353 aaPredicted RBP11.71□□□□□ -0.54
CDHR3-203ENST00000466045 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.54
CDHR3-203ENST00000466045 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 RAD50Q92878 1312 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 FRMPD1Q5SYB0 1578 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 LOC102724159A0A0B4J2E5 919 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 PWP2Q15269 919 aaKnown RBP11.7□□□□□ -0.54
CDHR3-203ENST00000466045 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
CDHR3-203ENST00000466045 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
CDHR3-203ENST00000466045 KDM5CP41229 1560 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 MAGI2Q86UL8 1455 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
CDHR3-203ENST00000466045 CCDC141Q6ZP82 1450 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 NUP155O75694 1391 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 DDIT3P35638 169 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
CDHR3-203ENST00000466045 SATB1Q01826 763 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 BCORL1Q5H9F3 1711 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 CCDC39Q9UFE4 941 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 RALGAPBQ86X10 1494 aa11.68□□□□□ -0.54
CDHR3-203ENST00000466045 KIF15Q9NS87 1388 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 YEATS2Q9ULM3 1422 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 ZNF445P59923 1031 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 MLH3Q9UHC1 1453 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 ZMYM4Q5VZL5 1548 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 TERF2Q15554 542 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
CDHR3-203ENST00000466045 INSRP06213 1382 aa11.66□□□□□ -0.54
CDHR3-203ENST00000466045 IGSF3O75054 1194 aa11.66□□□□□ -0.54
CDHR3-203ENST00000466045 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
CDHR3-203ENST00000466045 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
CDHR3-203ENST00000466045 USP47Q96K76 1375 aa11.66□□□□□ -0.54
CDHR3-203ENST00000466045 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.54
CDHR3-203ENST00000466045 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
CDHR3-203ENST00000466045 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
CDHR3-203ENST00000466045 GBP4Q96PP9 640 aa11.65□□□□□ -0.54
CDHR3-203ENST00000466045 MAPK8IP3Q9UPT6 1336 aa11.65□□□□□ -0.54
CDHR3-203ENST00000466045 ZBTB9Q96C00 473 aa11.64□□□□□ -0.55
CDHR3-203ENST00000466045 SEC24BO95487 1268 aa11.64□□□□□ -0.55
CDHR3-203ENST00000466045 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDHR3-203ENST00000466045 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
CDHR3-203ENST00000466045 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
CDHR3-203ENST00000466045 UNC13BO14795 1591 aa11.64□□□□□ -0.55
CDHR3-203ENST00000466045 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 FAM135AQ9P2D6 1515 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 ATP10AO60312 1499 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 RTEL1-TNFRSF6BF6WH68 1400 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-203ENST00000466045 NPC1L1Q9UHC9 1359 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
CDHR3-203ENST00000466045 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
CDHR3-203ENST00000466045 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-203ENST00000466045 PLXNC1O60486 1568 aa11.63□□□□□ -0.55
CDHR3-203ENST00000466045 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 GTF2A1P52655 376 aaPredicted RBP11.62□□□□□ -0.55
CDHR3-203ENST00000466045 SYCP1Q15431 976 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 ICE2Q659A1 982 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 MORC2Q9Y6X9 1032 aaPredicted RBP11.62□□□□□ -0.55
CDHR3-203ENST00000466045 ARHGEF40Q8TER5 1519 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 CTIFO43310 598 aaKnown RBP11.62□□□□□ -0.55
CDHR3-203ENST00000466045 KLHL40Q2TBA0 621 aa11.62□□□□□ -0.55
CDHR3-203ENST00000466045 DDX41Q9UJV9 622 aaKnown RBP11.62□□□□□ -0.55
CDHR3-203ENST00000466045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
CDHR3-203ENST00000466045 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
CDHR3-203ENST00000466045 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
CDHR3-203ENST00000466045 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
CDHR3-203ENST00000466045 MLECQ14165 292 aa11.61□□□□□ -0.55
CDHR3-203ENST00000466045 DONSONQ9NYP3 566 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms