RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ERVK-7P63135 1459 aa9.74□□□□□ -0.85
TPM3-214ENST00000466010 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
TPM3-214ENST00000466010 SERPINA10Q9UK55 444 aa9.74□□□□□ -0.85
TPM3-214ENST00000466010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM3-214ENST00000466010 LMTK2Q8IWU2 1503 aa9.73□□□□□ -0.85
TPM3-214ENST00000466010 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
TPM3-214ENST00000466010 TMEM121BQ9BXQ6 578 aaPredicted RBP9.73□□□□□ -0.85
TPM3-214ENST00000466010 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
TPM3-214ENST00000466010 ROCK1Q13464 1354 aa9.73□□□□□ -0.85
TPM3-214ENST00000466010 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
TPM3-214ENST00000466010 LTBP4Q8N2S1 1624 aa9.72□□□□□ -0.85
TPM3-214ENST00000466010 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
TPM3-214ENST00000466010 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
TPM3-214ENST00000466010 MED14O60244 1454 aa9.72□□□□□ -0.85
TPM3-214ENST00000466010 RPRD2Q5VT52 1461 aaKnown RBP9.72□□□□□ -0.85
TPM3-214ENST00000466010 EVI5O60447 810 aa9.71□□□□□ -0.86
TPM3-214ENST00000466010 VWDEQ8N2E2 1590 aa9.71□□□□□ -0.86
TPM3-214ENST00000466010 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
TPM3-214ENST00000466010 KCTD17Q8N5Z5 321 aa9.7□□□□□ -0.86
TPM3-214ENST00000466010 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
TPM3-214ENST00000466010 CPS1P31327 1500 aa9.7□□□□□ -0.86
TPM3-214ENST00000466010 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
TPM3-214ENST00000466010 CEP152O94986 1710 aa9.69□□□□□ -0.86
TPM3-214ENST00000466010 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
TPM3-214ENST00000466010 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
TPM3-214ENST00000466010 SLC52A1Q9NWF4 448 aa9.69□□□□□ -0.86
TPM3-214ENST00000466010 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
TPM3-214ENST00000466010 KDM5AP29375 1690 aaKnown RBP9.68□□□□□ -0.86
TPM3-214ENST00000466010 NEURL4Q96JN8 1562 aa9.68□□□□□ -0.86
TPM3-214ENST00000466010 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
TPM3-214ENST00000466010 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
TPM3-214ENST00000466010 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
TPM3-214ENST00000466010 SLIT1O75093 1534 aa9.67□□□□□ -0.86
TPM3-214ENST00000466010 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
TPM3-214ENST00000466010 SPDYE5A6NIY4 337 aa9.67□□□□□ -0.86
TPM3-214ENST00000466010 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
TPM3-214ENST00000466010 L3MBTL3Q96JM7 780 aaPredicted RBP9.67□□□□□ -0.86
TPM3-214ENST00000466010 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
TPM3-214ENST00000466010 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
TPM3-214ENST00000466010 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
TPM3-214ENST00000466010 IER5LQ5T953 404 aa9.66□□□□□ -0.86
TPM3-214ENST00000466010 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
TPM3-214ENST00000466010 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
TPM3-214ENST00000466010 IQGAP1P46940 1657 aa9.66□□□□□ -0.86
TPM3-214ENST00000466010 NOS1P29475 1434 aa9.65□□□□□ -0.86
TPM3-214ENST00000466010 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
TPM3-214ENST00000466010 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
TPM3-214ENST00000466010 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
TPM3-214ENST00000466010 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
TPM3-214ENST00000466010 EPAS1Q99814 870 aa9.65□□□□□ -0.86
TPM3-214ENST00000466010 TET3O43151 1660 aa9.64□□□□□ -0.87
TPM3-214ENST00000466010 UNC13BO14795 1591 aa9.64□□□□□ -0.87
TPM3-214ENST00000466010 MAP3K7O43318 606 aa9.64□□□□□ -0.87
TPM3-214ENST00000466010 TOM1O60784 492 aa9.64□□□□□ -0.87
TPM3-214ENST00000466010 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
TPM3-214ENST00000466010 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
TPM3-214ENST00000466010 TXNDC2Q86VQ3 553 aa9.64□□□□□ -0.87
TPM3-214ENST00000466010 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
TPM3-214ENST00000466010 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
TPM3-214ENST00000466010 UBAP1LF5GYI3 381 aa9.63□□□□□ -0.87
TPM3-214ENST00000466010 PLCG2P16885 1265 aa9.63□□□□□ -0.87
TPM3-214ENST00000466010 IDI1Q13907 227 aa9.63□□□□□ -0.87
TPM3-214ENST00000466010 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 CLCN6P51797 869 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 PIK3C2BO00750 1634 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 SYNMO15061 1565 aa9.62□□□□□ -0.87
TPM3-214ENST00000466010 GCC2Q8IWJ2 1684 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 PHF14O94880 888 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 NUP155O75694 1391 aa9.61□□□□□ -0.87
TPM3-214ENST00000466010 OATP04181 439 aa9.6□□□□□ -0.87
TPM3-214ENST00000466010 LTKP29376 864 aa9.6□□□□□ -0.87
TPM3-214ENST00000466010 ITGAEP38570 1179 aa9.6□□□□□ -0.87
TPM3-214ENST00000466010 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM3-214ENST00000466010 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
TPM3-214ENST00000466010 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 CFAP65Q6ZU64 1925 aaKnown RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 GALR2O43603 387 aaPredicted RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
TPM3-214ENST00000466010 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
TPM3-214ENST00000466010 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
TPM3-214ENST00000466010 AEBP1Q8IUX7 1158 aa9.58□□□□□ -0.88
TPM3-214ENST00000466010 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
TPM3-214ENST00000466010 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
TPM3-214ENST00000466010 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
TPM3-214ENST00000466010 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
TPM3-214ENST00000466010 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
TPM3-214ENST00000466010 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
TPM3-214ENST00000466010 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
TPM3-214ENST00000466010 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
TPM3-214ENST00000466010 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
TPM3-214ENST00000466010 LRRC7Q96NW7 1537 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms