RNA–Protein interactions for RNA: ENST00000465943.1

CAPN10-213, Transcript of calpain 10, humanhuman

TSL 4

Gene CAPN10, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-213ENST00000465943 CDK19Q9BWU1 502 aa29.85■■■□□ 2.37
CAPN10-213ENST00000465943 L3MBTL2Q969R5 705 aa29.84■■■□□ 2.37
CAPN10-213ENST00000465943 PAK3O75914 559 aaPredicted RBP29.82■■■□□ 2.36
CAPN10-213ENST00000465943 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
CAPN10-213ENST00000465943 CENPJQ9HC77 1338 aaPredicted RBP29.79■■■□□ 2.36
CAPN10-213ENST00000465943 FAM83GA6ND36 823 aa29.76■■■□□ 2.35
CAPN10-213ENST00000465943 POLR3AO14802 1390 aaPredicted RBP29.76■■■□□ 2.35
CAPN10-213ENST00000465943 CCDC9Q9Y3X0 531 aaKnown RBP29.75■■■□□ 2.35
CAPN10-213ENST00000465943 ACEP12821 1306 aa29.74■■■□□ 2.35
CAPN10-213ENST00000465943 VPS72Q15906 364 aa29.74■■■□□ 2.35
CAPN10-213ENST00000465943 PPIP5K1Q6PFW1 1433 aa29.73■■■□□ 2.35
CAPN10-213ENST00000465943 SRPK2P78362 688 aaKnown RBP29.72■■■□□ 2.35
CAPN10-213ENST00000465943 CCDC61Q9Y6R9 512 aa29.72■■■□□ 2.35
CAPN10-213ENST00000465943 NRKQ7Z2Y5 1582 aa29.72■■■□□ 2.35
CAPN10-213ENST00000465943 BTG4Q9NY30 223 aa29.7■■■□□ 2.35
CAPN10-213ENST00000465943 EP400Q96L91 3159 aa29.69■■■□□ 2.34
CAPN10-213ENST00000465943 ROCK2O75116 1388 aaKnown RBP29.69■■■□□ 2.34
CAPN10-213ENST00000465943 NUTM2GQ5VZR2 741 aa29.69■■■□□ 2.34
CAPN10-213ENST00000465943 CABP2Q9NPB3 220 aa29.69■■■□□ 2.34
CAPN10-213ENST00000465943 PLEKHG3A1L390 1219 aa29.67■■■□□ 2.34
CAPN10-213ENST00000465943 NBPF8Q3BBV2 869 aa29.67■■■□□ 2.34
CAPN10-213ENST00000465943 SEPT12Q8IYM1 358 aa29.66■■■□□ 2.34
CAPN10-213ENST00000465943 PRDM11Q9NQV5 511 aa29.65■■■□□ 2.34
CAPN10-213ENST00000465943 KIAA0232Q92628 1395 aa29.64■■■□□ 2.34
CAPN10-213ENST00000465943 A0A0G2JS52 829 aa29.62■■■□□ 2.33
CAPN10-213ENST00000465943 MYT1Q01538 1121 aa29.62■■■□□ 2.33
CAPN10-213ENST00000465943 THSD7AQ9UPZ6 1657 aa29.61■■■□□ 2.33
CAPN10-213ENST00000465943 AKAP12Q02952 1782 aa29.6■■■□□ 2.33
CAPN10-213ENST00000465943 CHRNA2Q15822 529 aa29.6■■■□□ 2.33
CAPN10-213ENST00000465943 FAM98CQ17RN3 349 aaKnown RBP29.59■■■□□ 2.33
CAPN10-213ENST00000465943 PIK3C2AO00443 1686 aa29.58■■■□□ 2.33
CAPN10-213ENST00000465943 ZC3H6P61129 1189 aaKnown RBP29.58■■■□□ 2.33
CAPN10-213ENST00000465943 ABTB2Q8N961 1025 aa29.58■■■□□ 2.33
CAPN10-213ENST00000465943 LMO7Q8WWI1 1683 aa29.58■■■□□ 2.33
CAPN10-213ENST00000465943 USP6P35125 1406 aa29.57■■■□□ 2.32
CAPN10-213ENST00000465943 BLMP54132 1417 aaPredicted RBP29.56■■■□□ 2.32
CAPN10-213ENST00000465943 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
CAPN10-213ENST00000465943 ONECUT3O60422 494 aaPredicted RBP29.56■■■□□ 2.32
CAPN10-213ENST00000465943 SPATA31A5Q5VU36 1347 aa29.55■■■□□ 2.32
CAPN10-213ENST00000465943 SPATA31A7Q8IWB4 1347 aa29.55■■■□□ 2.32
CAPN10-213ENST00000465943 CABP1Q9NZU7 370 aa29.55■■■□□ 2.32
CAPN10-213ENST00000465943 USP19O94966 1318 aa29.54■■■□□ 2.32
CAPN10-213ENST00000465943 KRT27Q7Z3Y8 459 aa29.54■■■□□ 2.32
CAPN10-213ENST00000465943 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
CAPN10-213ENST00000465943 CCDC125Q86Z20 511 aa29.53■■■□□ 2.32
CAPN10-213ENST00000465943 STRN4Q9NRL3 753 aa29.52■■■□□ 2.32
CAPN10-213ENST00000465943 CAMTA1Q9Y6Y1 1673 aa29.51■■■□□ 2.31
CAPN10-213ENST00000465943 SLIT3O75094 1523 aa29.5■■■□□ 2.31
CAPN10-213ENST00000465943 BRD4O60885 1362 aaPredicted RBP29.49■■■□□ 2.31
CAPN10-213ENST00000465943 RGPD1P0DJD0 1748 aa29.48■■■□□ 2.31
CAPN10-213ENST00000465943 MON2Q7Z3U7 1717 aa29.48■■■□□ 2.31
CAPN10-213ENST00000465943 SSH2Q76I76 1423 aa29.48■■■□□ 2.31
CAPN10-213ENST00000465943 CPDO75976 1380 aa29.48■■■□□ 2.31
CAPN10-213ENST00000465943 NLRP13Q86W25 1043 aa29.47■■■□□ 2.31
CAPN10-213ENST00000465943 SPATA31A1Q5TZJ5 1347 aa29.46■■■□□ 2.31
CAPN10-213ENST00000465943 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
CAPN10-213ENST00000465943 DEFB132Q7Z7B7 95 aa29.45■■■□□ 2.31
CAPN10-213ENST00000465943 TNS1Q9HBL0 1735 aaKnown RBP29.45■■■□□ 2.3
CAPN10-213ENST00000465943 CARD11Q9BXL7 1154 aa29.44■■■□□ 2.3
CAPN10-213ENST00000465943 GCP02774 474 aa29.43■■■□□ 2.3
CAPN10-213ENST00000465943 SF3B2Q13435 895 aaKnown RBP29.43■■■□□ 2.3
CAPN10-213ENST00000465943 FAM182BQ5T319 152 aa29.43■■■□□ 2.3
CAPN10-213ENST00000465943 USP35Q9P2H5 1018 aa29.43■■■□□ 2.3
CAPN10-213ENST00000465943 SBNO2Q9Y2G9 1366 aa29.42■■■□□ 2.3
CAPN10-213ENST00000465943 ZBTB7CA1YPR0 619 aa29.42■■■□□ 2.3
CAPN10-213ENST00000465943 COL5A2P05997 1499 aaPredicted RBP29.42■■■□□ 2.3
CAPN10-213ENST00000465943 NLRP6P59044 892 aa29.41■■■□□ 2.3
CAPN10-213ENST00000465943 EVA1CP58658 441 aa29.4■■■□□ 2.3
CAPN10-213ENST00000465943 COL18A1P39060 1754 aa29.39■■■□□ 2.3
CAPN10-213ENST00000465943 LARP1Q6PKG0 1096 aaKnown RBP29.39■■■□□ 2.3
CAPN10-213ENST00000465943 ZRANB1Q9UGI0 708 aa29.39■■■□□ 2.3
CAPN10-213ENST00000465943 RGPD5Q99666 1765 aa29.38■■■□□ 2.29
CAPN10-213ENST00000465943 WNK3Q9BYP7 1800 aa29.38■■■□□ 2.29
CAPN10-213ENST00000465943 CPSF1Q10570 1443 aaKnown RBP29.37■■■□□ 2.29
CAPN10-213ENST00000465943 TTC21BQ7Z4L5 1316 aa29.36■■■□□ 2.29
CAPN10-213ENST00000465943 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
CAPN10-213ENST00000465943 KTN1Q86UP2 1357 aaKnown RBP29.35■■■□□ 2.29
CAPN10-213ENST00000465943 CD163L1Q9NR16 1453 aa29.33■■■□□ 2.29
CAPN10-213ENST00000465943 USP54Q70EL1 1684 aa29.33■■■□□ 2.29
CAPN10-213ENST00000465943 NFAT5O94916 1531 aa29.32■■■□□ 2.28
CAPN10-213ENST00000465943 ZNF692Q9BU19 519 aaPredicted RBP29.32■■■□□ 2.28
CAPN10-213ENST00000465943 LRRC37A3O60309 1634 aa29.31■■■□□ 2.28
CAPN10-213ENST00000465943 AATKQ6ZMQ8 1374 aa29.3■■■□□ 2.28
CAPN10-213ENST00000465943 TTC21AQ8NDW8 1320 aa29.3■■■□□ 2.28
CAPN10-213ENST00000465943 SOX12O15370 315 aa29.3■■■□□ 2.28
CAPN10-213ENST00000465943 BAG6P46379 1132 aa29.3■■■□□ 2.28
CAPN10-213ENST00000465943 BARGINQ6ZT62 677 aa29.3■■■□□ 2.28
CAPN10-213ENST00000465943 CRB1P82279 1406 aa29.29■■■□□ 2.28
CAPN10-213ENST00000465943 TCP11L2Q8N4U5 519 aa29.29■■■□□ 2.28
CAPN10-213ENST00000465943 LTN1O94822 1766 aa29.27■■■□□ 2.28
CAPN10-213ENST00000465943 TMC1Q8TDI8 760 aa29.26■■■□□ 2.27
CAPN10-213ENST00000465943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.24■■■□□ 2.27
CAPN10-213ENST00000465943 EN1Q05925 392 aaPredicted RBP29.23■■■□□ 2.27
CAPN10-213ENST00000465943 PDE3BQ13370 1112 aa29.22■■■□□ 2.27
CAPN10-213ENST00000465943 KCNH5Q8NCM2 988 aa29.22■■■□□ 2.27
CAPN10-213ENST00000465943 AXIN2Q9Y2T1 843 aa29.22■■■□□ 2.27
CAPN10-213ENST00000465943 THRAP3Q9Y2W1 955 aaKnown RBP29.22■■■□□ 2.27
CAPN10-213ENST00000465943 DISP2A7MBM2 1401 aa29.21■■■□□ 2.27
CAPN10-213ENST00000465943 TRIM37O94972 964 aa29.21■■■□□ 2.27
CAPN10-213ENST00000465943 PEAK1Q9H792 1746 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms