RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 TRPM1Q7Z4N2 1603 aa20.18■□□□□ 0.82
CACNA1C-224ENST00000465934 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
CACNA1C-224ENST00000465934 EP400Q96L91 3159 aa20.18■□□□□ 0.82
CACNA1C-224ENST00000465934 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.18■□□□□ 0.82
CACNA1C-224ENST00000465934 ITSN1Q15811 1721 aa20.17■□□□□ 0.82
CACNA1C-224ENST00000465934 PLEKHG3A1L390 1219 aa20.17■□□□□ 0.82
CACNA1C-224ENST00000465934 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
CACNA1C-224ENST00000465934 VPS72Q15906 364 aa20.16■□□□□ 0.82
CACNA1C-224ENST00000465934 NUTM2GQ5VZR2 741 aa20.16■□□□□ 0.82
CACNA1C-224ENST00000465934 ATAD2Q6PL18 1390 aa20.16■□□□□ 0.82
CACNA1C-224ENST00000465934 PPIP5K1Q6PFW1 1433 aa20.16■□□□□ 0.82
CACNA1C-224ENST00000465934 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
CACNA1C-224ENST00000465934 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
CACNA1C-224ENST00000465934 BTG4Q9NY30 223 aa20.14■□□□□ 0.81
CACNA1C-224ENST00000465934 CCDC9Q9Y3X0 531 aaKnown RBP20.14■□□□□ 0.81
CACNA1C-224ENST00000465934 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
CACNA1C-224ENST00000465934 CABP1Q9NZU7 370 aa20.11■□□□□ 0.81
CACNA1C-224ENST00000465934 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
CACNA1C-224ENST00000465934 KIAA0232Q92628 1395 aa20.1■□□□□ 0.81
CACNA1C-224ENST00000465934 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
CACNA1C-224ENST00000465934 PRDM11Q9NQV5 511 aa20.1■□□□□ 0.81
CACNA1C-224ENST00000465934 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
CACNA1C-224ENST00000465934 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
CACNA1C-224ENST00000465934 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
CACNA1C-224ENST00000465934 EVC2Q86UK5 1308 aa20.08■□□□□ 0.81
CACNA1C-224ENST00000465934 NRAPQ86VF7 1730 aa20.08■□□□□ 0.81
CACNA1C-224ENST00000465934 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.81
CACNA1C-224ENST00000465934 COL14A1Q05707 1796 aaKnown RBP20.08■□□□□ 0.8
CACNA1C-224ENST00000465934 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
CACNA1C-224ENST00000465934 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
CACNA1C-224ENST00000465934 USP6P35125 1406 aa20.05■□□□□ 0.8
CACNA1C-224ENST00000465934 FAM98CQ17RN3 349 aaKnown RBP20.05■□□□□ 0.8
CACNA1C-224ENST00000465934 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
CACNA1C-224ENST00000465934 USP19O94966 1318 aa20.04■□□□□ 0.8
CACNA1C-224ENST00000465934 NRKQ7Z2Y5 1582 aa20.04■□□□□ 0.8
CACNA1C-224ENST00000465934 SPATA31A5Q5VU36 1347 aa20.02■□□□□ 0.8
CACNA1C-224ENST00000465934 SPATA31A7Q8IWB4 1347 aa20.02■□□□□ 0.8
CACNA1C-224ENST00000465934 A0A0G2JS52 829 aa20.02■□□□□ 0.8
CACNA1C-224ENST00000465934 MYT1Q01538 1121 aa20.02■□□□□ 0.8
CACNA1C-224ENST00000465934 STRN4Q9NRL3 753 aa20.02■□□□□ 0.8
CACNA1C-224ENST00000465934 SSH2Q76I76 1423 aa20.02■□□□□ 0.79
CACNA1C-224ENST00000465934 GCP02774 474 aa20■□□□□ 0.79
CACNA1C-224ENST00000465934 KRT27Q7Z3Y8 459 aa20■□□□□ 0.79
CACNA1C-224ENST00000465934 NLRP13Q86W25 1043 aa20■□□□□ 0.79
CACNA1C-224ENST00000465934 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
CACNA1C-224ENST00000465934 BRD4O60885 1362 aaPredicted RBP19.99■□□□□ 0.79
CACNA1C-224ENST00000465934 CPDO75976 1380 aa19.99■□□□□ 0.79
CACNA1C-224ENST00000465934 SBNO2Q9Y2G9 1366 aa19.98■□□□□ 0.79
CACNA1C-224ENST00000465934 NLRP6P59044 892 aa19.98■□□□□ 0.79
CACNA1C-224ENST00000465934 SPATA31A1Q5TZJ5 1347 aa19.98■□□□□ 0.79
CACNA1C-224ENST00000465934 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
CACNA1C-224ENST00000465934 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
CACNA1C-224ENST00000465934 SRCAPQ6ZRS2 3230 aa19.96■□□□□ 0.79
CACNA1C-224ENST00000465934 FAM182BQ5T319 152 aa19.96■□□□□ 0.79
CACNA1C-224ENST00000465934 CCDC125Q86Z20 511 aa19.96■□□□□ 0.79
CACNA1C-224ENST00000465934 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
CACNA1C-224ENST00000465934 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
CACNA1C-224ENST00000465934 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
CACNA1C-224ENST00000465934 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
CACNA1C-224ENST00000465934 PIK3C2AO00443 1686 aa19.94■□□□□ 0.78
CACNA1C-224ENST00000465934 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
CACNA1C-224ENST00000465934 EVA1CP58658 441 aa19.94■□□□□ 0.78
CACNA1C-224ENST00000465934 LMO7Q8WWI1 1683 aa19.94■□□□□ 0.78
CACNA1C-224ENST00000465934 SLIT3O75094 1523 aa19.93■□□□□ 0.78
CACNA1C-224ENST00000465934 DEFB132Q7Z7B7 95 aa19.93■□□□□ 0.78
CACNA1C-224ENST00000465934 ZNF692Q9BU19 519 aaPredicted RBP19.93■□□□□ 0.78
CACNA1C-224ENST00000465934 THSD7AQ9UPZ6 1657 aa19.93■□□□□ 0.78
CACNA1C-224ENST00000465934 KTN1Q86UP2 1357 aaKnown RBP19.92■□□□□ 0.78
CACNA1C-224ENST00000465934 CD163L1Q9NR16 1453 aa19.91■□□□□ 0.78
CACNA1C-224ENST00000465934 SOX12O15370 315 aa19.9■□□□□ 0.78
CACNA1C-224ENST00000465934 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
CACNA1C-224ENST00000465934 TESK2Q96S53 571 aa19.9■□□□□ 0.78
CACNA1C-224ENST00000465934 COL5A2P05997 1499 aaPredicted RBP19.9■□□□□ 0.78
CACNA1C-224ENST00000465934 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
CACNA1C-224ENST00000465934 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
CACNA1C-224ENST00000465934 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
CACNA1C-224ENST00000465934 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
CACNA1C-224ENST00000465934 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
CACNA1C-224ENST00000465934 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
CACNA1C-224ENST00000465934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.88■□□□□ 0.77
CACNA1C-224ENST00000465934 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
CACNA1C-224ENST00000465934 BARGINQ6ZT62 677 aa19.87■□□□□ 0.77
CACNA1C-224ENST00000465934 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
CACNA1C-224ENST00000465934 AXIN2Q9Y2T1 843 aa19.87■□□□□ 0.77
CACNA1C-224ENST00000465934 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
CACNA1C-224ENST00000465934 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
CACNA1C-224ENST00000465934 NME9Q86XW9 330 aa19.85■□□□□ 0.77
CACNA1C-224ENST00000465934 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
CACNA1C-224ENST00000465934 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
CACNA1C-224ENST00000465934 NFAT5O94916 1531 aa19.83■□□□□ 0.77
CACNA1C-224ENST00000465934 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
CACNA1C-224ENST00000465934 CRB1P82279 1406 aa19.83■□□□□ 0.76
CACNA1C-224ENST00000465934 HDGFL2Q7Z4V5 671 aaPredicted RBP19.82■□□□□ 0.76
CACNA1C-224ENST00000465934 USP47Q96K76 1375 aa19.82■□□□□ 0.76
CACNA1C-224ENST00000465934 COL18A1P39060 1754 aa19.81■□□□□ 0.76
CACNA1C-224ENST00000465934 PUS7Q96PZ0 661 aaKnown RBP19.81■□□□□ 0.76
CACNA1C-224ENST00000465934 THRAP3Q9Y2W1 955 aaKnown RBP19.81■□□□□ 0.76
CACNA1C-224ENST00000465934 USP31Q70CQ4 1352 aa19.81■□□□□ 0.76
CACNA1C-224ENST00000465934 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
CACNA1C-224ENST00000465934 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms