RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 NPM1P06748 294 aaKnown RBP eCLIP24.72■■□□□ 1.55
SDF4-205ENST00000465727 ITPRIPQ8IWB1 547 aa24.72■■□□□ 1.55
SDF4-205ENST00000465727 ERBB4Q15303 1308 aa24.72■■□□□ 1.55
SDF4-205ENST00000465727 UHRF1BP1LA0JNW5 1464 aa24.71■■□□□ 1.55
SDF4-205ENST00000465727 FANCAO15360 1455 aa24.71■■□□□ 1.55
SDF4-205ENST00000465727 SLC12A5Q9H2X9 1139 aa24.71■■□□□ 1.55
SDF4-205ENST00000465727 IL16Q14005 1332 aa24.7■■□□□ 1.55
SDF4-205ENST00000465727 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
SDF4-205ENST00000465727 NUCB1Q02818 461 aa24.7■■□□□ 1.54
SDF4-205ENST00000465727 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
SDF4-205ENST00000465727 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
SDF4-205ENST00000465727 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.54
SDF4-205ENST00000465727 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.54
SDF4-205ENST00000465727 CFAP74Q9C0B2 1584 aa24.69■■□□□ 1.54
SDF4-205ENST00000465727 KIF16BQ96L93 1317 aa24.69■■□□□ 1.54
SDF4-205ENST00000465727 ZBTB40Q9NUA8 1239 aa24.69■■□□□ 1.54
SDF4-205ENST00000465727 NOS1P29475 1434 aa24.69■■□□□ 1.54
SDF4-205ENST00000465727 IBTKQ9P2D0 1353 aaPredicted RBP24.68■■□□□ 1.54
SDF4-205ENST00000465727 AFAP1Q8N556 730 aa24.68■■□□□ 1.54
SDF4-205ENST00000465727 IPO8O15397 1037 aaKnown RBP24.67■■□□□ 1.54
SDF4-205ENST00000465727 EXOSC9Q06265 439 aaKnown RBP24.67■■□□□ 1.54
SDF4-205ENST00000465727 CCDC173Q0VFZ6 552 aa24.67■■□□□ 1.54
SDF4-205ENST00000465727 BMP2KLQ5H9B9 411 aa24.67■■□□□ 1.54
SDF4-205ENST00000465727 SSH1Q8WYL5 1049 aa24.67■■□□□ 1.54
SDF4-205ENST00000465727 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
SDF4-205ENST00000465727 ANKRD36BQ8N2N9 1353 aa24.66■■□□□ 1.54
SDF4-205ENST00000465727 GAS2L3Q86XJ1 694 aa24.66■■□□□ 1.54
SDF4-205ENST00000465727 PPLO60437 1756 aa24.66■■□□□ 1.54
SDF4-205ENST00000465727 TSR2Q969E8 191 aaKnown RBP24.65■■□□□ 1.54
SDF4-205ENST00000465727 LMTK2Q8IWU2 1503 aa24.65■■□□□ 1.54
SDF4-205ENST00000465727 CLEC17AQ6ZS10 378 aa24.65■■□□□ 1.54
SDF4-205ENST00000465727 VSIG10Q8N0Z9 540 aa24.65■■□□□ 1.54
SDF4-205ENST00000465727 REREQ9P2R6 1566 aa24.64■■□□□ 1.54
SDF4-205ENST00000465727 PPP1R9BQ96SB3 815 aa24.64■■□□□ 1.53
SDF4-205ENST00000465727 GOLGA6L22H0YM25 854 aa24.63■■□□□ 1.53
SDF4-205ENST00000465727 KIF3BO15066 747 aa24.63■■□□□ 1.53
SDF4-205ENST00000465727 PPRC1Q5VV67 1664 aaKnown RBP24.63■■□□□ 1.53
SDF4-205ENST00000465727 CHD1LQ86WJ1 897 aa24.63■■□□□ 1.53
SDF4-205ENST00000465727 NOB1Q9ULX3 412 aaKnown RBP24.63■■□□□ 1.53
SDF4-205ENST00000465727 CD109Q6YHK3 1445 aa24.62■■□□□ 1.53
SDF4-205ENST00000465727 TMEM57Q8N5G2 664 aa24.62■■□□□ 1.53
SDF4-205ENST00000465727 C14orf93Q9H972 538 aaKnown RBP24.62■■□□□ 1.53
SDF4-205ENST00000465727 DIP2BQ9P265 1576 aa24.62■■□□□ 1.53
SDF4-205ENST00000465727 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
SDF4-205ENST00000465727 ARHGAP31Q2M1Z3 1444 aa24.61■■□□□ 1.53
SDF4-205ENST00000465727 K7ELQ4 463 aaPredicted RBP24.61■■□□□ 1.53
SDF4-205ENST00000465727 TMPOP42166 694 aaKnown RBP24.61■■□□□ 1.53
SDF4-205ENST00000465727 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
SDF4-205ENST00000465727 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
SDF4-205ENST00000465727 ALDH1L2Q3SY69 923 aa24.6■■□□□ 1.53
SDF4-205ENST00000465727 ABCA9Q8IUA7 1624 aa24.6■■□□□ 1.53
SDF4-205ENST00000465727 KIF2CQ99661 725 aa24.6■■□□□ 1.53
SDF4-205ENST00000465727 ZMYND15Q9H091 742 aa24.6■■□□□ 1.53
SDF4-205ENST00000465727 CHMP4BQ9H444 224 aaKnown RBP24.6■■□□□ 1.53
SDF4-205ENST00000465727 MED14O60244 1454 aa24.59■■□□□ 1.53
SDF4-205ENST00000465727 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
SDF4-205ENST00000465727 ZSCAN30Q86W11 494 aa24.58■■□□□ 1.53
SDF4-205ENST00000465727 GCC1Q96CN9 775 aa24.58■■□□□ 1.53
SDF4-205ENST00000465727 LNPKQ9C0E8 428 aa24.58■■□□□ 1.53
SDF4-205ENST00000465727 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 KLHL40Q2TBA0 621 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 ZNF428Q96B54 188 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 PDCL3Q9H2J4 239 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
SDF4-205ENST00000465727 NASPP49321 788 aaPredicted RBP24.57■■□□□ 1.52
SDF4-205ENST00000465727 TERF1P54274 439 aa24.57■■□□□ 1.52
SDF4-205ENST00000465727 BRPF1P55201 1214 aaPredicted RBP24.56■■□□□ 1.52
SDF4-205ENST00000465727 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
SDF4-205ENST00000465727 TULP4Q9NRJ4 1543 aa24.54■■□□□ 1.52
SDF4-205ENST00000465727 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
SDF4-205ENST00000465727 ARHGEF28Q8N1W1 1705 aaKnown RBP24.53■■□□□ 1.52
SDF4-205ENST00000465727 ANKRD26Q9UPS8 1709 aa24.53■■□□□ 1.52
SDF4-205ENST00000465727 HS1BP3Q53T59 392 aa24.53■■□□□ 1.52
SDF4-205ENST00000465727 CFAP44Q96MT7 982 aa24.53■■□□□ 1.52
SDF4-205ENST00000465727 GLI2P10070 1586 aa24.53■■□□□ 1.52
SDF4-205ENST00000465727 OFD1O75665 1012 aa24.52■■□□□ 1.52
SDF4-205ENST00000465727 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.52■■□□□ 1.52
SDF4-205ENST00000465727 KIAA1211Q6ZU35 1233 aa24.51■■□□□ 1.51
SDF4-205ENST00000465727 MSNP26038 577 aaKnown RBP24.5■■□□□ 1.51
SDF4-205ENST00000465727 PPIP5K1Q6PFW1 1433 aa24.49■■□□□ 1.51
SDF4-205ENST00000465727 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
SDF4-205ENST00000465727 CD2BP2O95400 341 aaKnown RBP24.49■■□□□ 1.51
SDF4-205ENST00000465727 ZNF445P59923 1031 aa24.49■■□□□ 1.51
SDF4-205ENST00000465727 TBC1D9Q6ZT07 1266 aa24.49■■□□□ 1.51
SDF4-205ENST00000465727 DDX49Q9Y6V7 483 aaKnown RBP24.49■■□□□ 1.51
SDF4-205ENST00000465727 PIK3R4Q99570 1358 aa24.48■■□□□ 1.51
SDF4-205ENST00000465727 BAG4O95429 457 aaKnown RBP24.48■■□□□ 1.51
SDF4-205ENST00000465727 SSFA2P28290 1259 aa24.48■■□□□ 1.51
SDF4-205ENST00000465727 RIPK4P57078 832 aa24.47■■□□□ 1.51
SDF4-205ENST00000465727 ANKRD45Q5TZF3 282 aa24.47■■□□□ 1.51
SDF4-205ENST00000465727 ARHGAP45Q92619 1136 aa24.47■■□□□ 1.51
SDF4-205ENST00000465727 NUCB2P80303 420 aa24.46■■□□□ 1.51
SDF4-205ENST00000465727 GAS2L2Q8NHY3 880 aa24.46■■□□□ 1.51
SDF4-205ENST00000465727 ZBTB7BO15156 539 aaPredicted RBP24.45■■□□□ 1.5
SDF4-205ENST00000465727 CDC45O75419 566 aa24.45■■□□□ 1.5
SDF4-205ENST00000465727 PTCH1Q13635 1447 aa24.45■■□□□ 1.5
SDF4-205ENST00000465727 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
SDF4-205ENST00000465727 RABEP1Q15276 862 aa24.44■■□□□ 1.5
SDF4-205ENST00000465727 KIDINS220Q9ULH0 1771 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms