RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
TOM1-213ENST00000465529 NWD2Q9ULI1 1742 aa24.65■■□□□ 1.54
TOM1-213ENST00000465529 ACEP12821 1306 aa24.64■■□□□ 1.54
TOM1-213ENST00000465529 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.54
TOM1-213ENST00000465529 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.53
TOM1-213ENST00000465529 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
TOM1-213ENST00000465529 CCDC61Q9Y6R9 512 aa24.63■■□□□ 1.53
TOM1-213ENST00000465529 POLR3AO14802 1390 aaPredicted RBP24.63■■□□□ 1.53
TOM1-213ENST00000465529 NRAPQ86VF7 1730 aa24.62■■□□□ 1.53
TOM1-213ENST00000465529 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
TOM1-213ENST00000465529 PPIP5K1Q6PFW1 1433 aa24.61■■□□□ 1.53
TOM1-213ENST00000465529 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
TOM1-213ENST00000465529 NUTM2GQ5VZR2 741 aa24.61■■□□□ 1.53
TOM1-213ENST00000465529 PLEKHG3A1L390 1219 aa24.6■■□□□ 1.53
TOM1-213ENST00000465529 COL14A1Q05707 1796 aaKnown RBP24.58■■□□□ 1.53
TOM1-213ENST00000465529 TONSLQ96HA7 1378 aa24.57■■□□□ 1.52
TOM1-213ENST00000465529 BRWD3Q6RI45 1802 aa24.57■■□□□ 1.52
TOM1-213ENST00000465529 VPS72Q15906 364 aa24.54■■□□□ 1.52
TOM1-213ENST00000465529 BTG4Q9NY30 223 aa24.54■■□□□ 1.52
TOM1-213ENST00000465529 CCDC9Q9Y3X0 531 aaKnown RBP24.54■■□□□ 1.52
TOM1-213ENST00000465529 CABP1Q9NZU7 370 aa24.53■■□□□ 1.52
TOM1-213ENST00000465529 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
TOM1-213ENST00000465529 NRKQ7Z2Y5 1582 aa24.52■■□□□ 1.52
TOM1-213ENST00000465529 EVC2Q86UK5 1308 aa24.51■■□□□ 1.51
TOM1-213ENST00000465529 KIAA0232Q92628 1395 aa24.51■■□□□ 1.51
TOM1-213ENST00000465529 CHRNA2Q15822 529 aa24.5■■□□□ 1.51
TOM1-213ENST00000465529 CARD11Q9BXL7 1154 aa24.5■■□□□ 1.51
TOM1-213ENST00000465529 PRDM11Q9NQV5 511 aa24.5■■□□□ 1.51
TOM1-213ENST00000465529 EP400Q96L91 3159 aa24.49■■□□□ 1.51
TOM1-213ENST00000465529 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
TOM1-213ENST00000465529 ABTB2Q8N961 1025 aa24.49■■□□□ 1.51
TOM1-213ENST00000465529 USP6P35125 1406 aa24.48■■□□□ 1.51
TOM1-213ENST00000465529 SEPT12Q8IYM1 358 aa24.47■■□□□ 1.51
TOM1-213ENST00000465529 AKAP12Q02952 1782 aa24.47■■□□□ 1.51
TOM1-213ENST00000465529 PIK3C2AO00443 1686 aa24.45■■□□□ 1.5
TOM1-213ENST00000465529 USP19O94966 1318 aa24.44■■□□□ 1.5
TOM1-213ENST00000465529 FAM98CQ17RN3 349 aaKnown RBP24.43■■□□□ 1.5
TOM1-213ENST00000465529 SSH2Q76I76 1423 aa24.43■■□□□ 1.5
TOM1-213ENST00000465529 ONECUT3O60422 494 aaPredicted RBP24.41■■□□□ 1.5
TOM1-213ENST00000465529 STRN4Q9NRL3 753 aa24.41■■□□□ 1.5
TOM1-213ENST00000465529 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 SPATA31A5Q5VU36 1347 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 SPATA31A7Q8IWB4 1347 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 A0A0G2JS52 829 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 MYT1Q01538 1121 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 SBNO2Q9Y2G9 1366 aa24.4■■□□□ 1.5
TOM1-213ENST00000465529 NLRP13Q86W25 1043 aa24.39■■□□□ 1.49
TOM1-213ENST00000465529 CAMTA1Q9Y6Y1 1673 aa24.39■■□□□ 1.49
TOM1-213ENST00000465529 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
TOM1-213ENST00000465529 THSD7AQ9UPZ6 1657 aa24.37■■□□□ 1.49
TOM1-213ENST00000465529 SLIT3O75094 1523 aa24.37■■□□□ 1.49
TOM1-213ENST00000465529 GCP02774 474 aa24.37■■□□□ 1.49
TOM1-213ENST00000465529 NLRP6P59044 892 aa24.37■■□□□ 1.49
TOM1-213ENST00000465529 MON2Q7Z3U7 1717 aa24.37■■□□□ 1.49
TOM1-213ENST00000465529 CPDO75976 1380 aa24.36■■□□□ 1.49
TOM1-213ENST00000465529 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
TOM1-213ENST00000465529 CPSF1Q10570 1443 aaKnown RBP24.35■■□□□ 1.49
TOM1-213ENST00000465529 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
TOM1-213ENST00000465529 KRT27Q7Z3Y8 459 aa24.35■■□□□ 1.49
TOM1-213ENST00000465529 SPATA31A1Q5TZJ5 1347 aa24.34■■□□□ 1.49
TOM1-213ENST00000465529 CD163L1Q9NR16 1453 aa24.33■■□□□ 1.49
TOM1-213ENST00000465529 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
TOM1-213ENST00000465529 USP35Q9P2H5 1018 aa24.33■■□□□ 1.49
TOM1-213ENST00000465529 KTN1Q86UP2 1357 aaKnown RBP24.32■■□□□ 1.48
TOM1-213ENST00000465529 FAM182BQ5T319 152 aa24.32■■□□□ 1.48
TOM1-213ENST00000465529 LARP1Q6PKG0 1096 aaKnown RBP24.31■■□□□ 1.48
TOM1-213ENST00000465529 ZNF692Q9BU19 519 aaPredicted RBP24.31■■□□□ 1.48
TOM1-213ENST00000465529 BLMP54132 1417 aaPredicted RBP24.3■■□□□ 1.48
TOM1-213ENST00000465529 COL18A1P39060 1754 aa24.3■■□□□ 1.48
TOM1-213ENST00000465529 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
TOM1-213ENST00000465529 EVA1CP58658 441 aa24.3■■□□□ 1.48
TOM1-213ENST00000465529 TMC1Q8TDI8 760 aa24.3■■□□□ 1.48
TOM1-213ENST00000465529 SOX12O15370 315 aa24.29■■□□□ 1.48
TOM1-213ENST00000465529 TESK2Q96S53 571 aa24.29■■□□□ 1.48
TOM1-213ENST00000465529 SLC12A5Q9H2X9 1139 aa24.29■■□□□ 1.48
TOM1-213ENST00000465529 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
TOM1-213ENST00000465529 COL5A2P05997 1499 aaPredicted RBP24.29■■□□□ 1.48
TOM1-213ENST00000465529 DEFB132Q7Z7B7 95 aa24.28■■□□□ 1.48
TOM1-213ENST00000465529 RGPD5Q99666 1765 aa24.28■■□□□ 1.48
TOM1-213ENST00000465529 CCDC125Q86Z20 511 aa24.27■■□□□ 1.48
TOM1-213ENST00000465529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.27■■□□□ 1.48
TOM1-213ENST00000465529 TTC21AQ8NDW8 1320 aa24.26■■□□□ 1.47
TOM1-213ENST00000465529 NFAT5O94916 1531 aa24.25■■□□□ 1.47
TOM1-213ENST00000465529 NME9Q86XW9 330 aa24.23■■□□□ 1.47
TOM1-213ENST00000465529 AXIN2Q9Y2T1 843 aa24.23■■□□□ 1.47
TOM1-213ENST00000465529 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
TOM1-213ENST00000465529 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
TOM1-213ENST00000465529 USP54Q70EL1 1684 aa24.22■■□□□ 1.47
TOM1-213ENST00000465529 USP47Q96K76 1375 aa24.22■■□□□ 1.47
TOM1-213ENST00000465529 ARHGEF25Q86VW2 580 aa24.2■■□□□ 1.46
TOM1-213ENST00000465529 TCP11L2Q8N4U5 519 aa24.2■■□□□ 1.46
TOM1-213ENST00000465529 RGPD1P0DJD0 1748 aa24.2■■□□□ 1.46
TOM1-213ENST00000465529 CRB1P82279 1406 aa24.19■■□□□ 1.46
TOM1-213ENST00000465529 TNS1Q9HBL0 1735 aaKnown RBP24.19■■□□□ 1.46
TOM1-213ENST00000465529 SF3B2Q13435 895 aaKnown RBP24.19■■□□□ 1.46
TOM1-213ENST00000465529 BARGINQ6ZT62 677 aa24.19■■□□□ 1.46
TOM1-213ENST00000465529 HDGFL2Q7Z4V5 671 aaPredicted RBP24.19■■□□□ 1.46
TOM1-213ENST00000465529 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
TOM1-213ENST00000465529 PARP4Q9UKK3 1724 aaKnown RBP24.18■■□□□ 1.46
TOM1-213ENST00000465529 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms