RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 APBA3O96018 575 aa14.77□□□□□ -0.05
USP39-212ENST00000465514 PSME1Q06323 249 aa14.77□□□□□ -0.05
USP39-212ENST00000465514 STK26Q9P289 416 aa14.77□□□□□ -0.05
USP39-212ENST00000465514 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
USP39-212ENST00000465514 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
USP39-212ENST00000465514 KCNQ2O43526 872 aa14.75□□□□□ -0.05
USP39-212ENST00000465514 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
USP39-212ENST00000465514 CASZ1Q86V15 1759 aa14.75□□□□□ -0.05
USP39-212ENST00000465514 MYOM1P52179 1685 aa14.74□□□□□ -0.05
USP39-212ENST00000465514 RPGRIP1LQ68CZ1 1315 aa14.74□□□□□ -0.05
USP39-212ENST00000465514 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
USP39-212ENST00000465514 NBPF14Q5TI25 921 aa14.74□□□□□ -0.05
USP39-212ENST00000465514 FAM196AQ6ZSG2 479 aa14.74□□□□□ -0.05
USP39-212ENST00000465514 C1QTNF8P60827 252 aa14.72□□□□□ -0.05
USP39-212ENST00000465514 ABCC11Q96J66 1382 aa14.71□□□□□ -0.06
USP39-212ENST00000465514 RGPD3A6NKT7 1758 aaPredicted RBP14.7□□□□□ -0.06
USP39-212ENST00000465514 RGPD4Q7Z3J3 1758 aa14.7□□□□□ -0.06
USP39-212ENST00000465514 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
USP39-212ENST00000465514 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
USP39-212ENST00000465514 TMEM132EQ6IEE7 984 aa14.68□□□□□ -0.06
USP39-212ENST00000465514 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
USP39-212ENST00000465514 PHRF1Q9P1Y6 1649 aaKnown RBP14.66□□□□□ -0.06
USP39-212ENST00000465514 PMFBP1Q8TBY8 1022 aa14.66□□□□□ -0.06
USP39-212ENST00000465514 SBF2Q86WG5 1849 aa14.66□□□□□ -0.06
USP39-212ENST00000465514 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
USP39-212ENST00000465514 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
USP39-212ENST00000465514 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
USP39-212ENST00000465514 ANKARQ7Z5J8 1434 aa14.64□□□□□ -0.07
USP39-212ENST00000465514 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
USP39-212ENST00000465514 GOLGB1Q14789 3259 aaKnown RBP14.63□□□□□ -0.07
USP39-212ENST00000465514 PDE3BQ13370 1112 aa14.63□□□□□ -0.07
USP39-212ENST00000465514 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
USP39-212ENST00000465514 PEAK1Q9H792 1746 aa14.62□□□□□ -0.07
USP39-212ENST00000465514 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
USP39-212ENST00000465514 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
USP39-212ENST00000465514 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
USP39-212ENST00000465514 PDGFDQ9GZP0 370 aaPredicted RBP14.61□□□□□ -0.07
USP39-212ENST00000465514 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
USP39-212ENST00000465514 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
USP39-212ENST00000465514 SAFB2Q14151 953 aaKnown RBP eCLIP14.6□□□□□ -0.07
USP39-212ENST00000465514 CHRNA2Q15822 529 aa14.6□□□□□ -0.07
USP39-212ENST00000465514 DLC1Q96QB1 1528 aa14.6□□□□□ -0.07
USP39-212ENST00000465514 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
USP39-212ENST00000465514 PTGER2P43116 358 aa14.59□□□□□ -0.07
USP39-212ENST00000465514 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
USP39-212ENST00000465514 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
USP39-212ENST00000465514 BARGINQ6ZT62 677 aa14.58□□□□□ -0.08
USP39-212ENST00000465514 SIRT1Q96EB6 747 aa14.58□□□□□ -0.08
USP39-212ENST00000465514 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
USP39-212ENST00000465514 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.08
USP39-212ENST00000465514 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.08
USP39-212ENST00000465514 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
USP39-212ENST00000465514 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
USP39-212ENST00000465514 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
USP39-212ENST00000465514 LMO7Q8WWI1 1683 aa14.56□□□□□ -0.08
USP39-212ENST00000465514 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
USP39-212ENST00000465514 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
USP39-212ENST00000465514 PRAM1Q96QH2 718 aa14.56□□□□□ -0.08
USP39-212ENST00000465514 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
USP39-212ENST00000465514 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
USP39-212ENST00000465514 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
USP39-212ENST00000465514 TULP4Q9NRJ4 1543 aa14.55□□□□□ -0.08
USP39-212ENST00000465514 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
USP39-212ENST00000465514 OVOS2A0A0J9YW53 1432 aa14.54□□□□□ -0.08
USP39-212ENST00000465514 OVOS2Q6IE36 1432 aa14.54□□□□□ -0.08
USP39-212ENST00000465514 AKAP12Q02952 1782 aa14.54□□□□□ -0.08
USP39-212ENST00000465514 WNK3Q9BYP7 1800 aa14.53□□□□□ -0.08
USP39-212ENST00000465514 PRR36Q9H6K5 1346 aa14.53□□□□□ -0.08
USP39-212ENST00000465514 EVA1CP58658 441 aa14.53□□□□□ -0.08
USP39-212ENST00000465514 ZC3H6P61129 1189 aaKnown RBP14.53□□□□□ -0.08
USP39-212ENST00000465514 LARP1Q6PKG0 1096 aaKnown RBP14.53□□□□□ -0.08
USP39-212ENST00000465514 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
USP39-212ENST00000465514 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
USP39-212ENST00000465514 PLSCR1O15162 318 aa14.52□□□□□ -0.09
USP39-212ENST00000465514 BCL11BQ9C0K0 894 aaPredicted RBP14.52□□□□□ -0.09
USP39-212ENST00000465514 ATP7BP35670 1465 aa14.51□□□□□ -0.09
USP39-212ENST00000465514 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
USP39-212ENST00000465514 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
USP39-212ENST00000465514 PTF1AQ7RTS3 328 aa14.5□□□□□ -0.09
USP39-212ENST00000465514 NGDNQ8NEJ9 315 aaKnown RBP14.5□□□□□ -0.09
USP39-212ENST00000465514 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
USP39-212ENST00000465514 POGKQ9P215 609 aa14.5□□□□□ -0.09
USP39-212ENST00000465514 C11orf95C9JLR9 678 aaPredicted RBP14.49□□□□□ -0.09
USP39-212ENST00000465514 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
USP39-212ENST00000465514 CFAP70Q5T0N1 1121 aa14.48□□□□□ -0.09
USP39-212ENST00000465514 NUTM2GQ5VZR2 741 aa14.48□□□□□ -0.09
USP39-212ENST00000465514 PROM2Q8N271 834 aa14.48□□□□□ -0.09
USP39-212ENST00000465514 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
USP39-212ENST00000465514 COL5A2P05997 1499 aaPredicted RBP14.47□□□□□ -0.09
USP39-212ENST00000465514 MPHOSPH9Q99550 1183 aa14.47□□□□□ -0.09
USP39-212ENST00000465514 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
USP39-212ENST00000465514 MAP3K5Q99683 1374 aa14.47□□□□□ -0.09
USP39-212ENST00000465514 MINK1Q8N4C8 1332 aaPredicted RBP14.46□□□□□ -0.09
USP39-212ENST00000465514 GPR162Q16538 588 aa14.46□□□□□ -0.09
USP39-212ENST00000465514 STK32BQ9NY57 414 aa14.46□□□□□ -0.09
USP39-212ENST00000465514 ADGRB1O14514 1584 aa14.45□□□□□ -0.1
USP39-212ENST00000465514 ARXQ96QS3 562 aa14.45□□□□□ -0.1
USP39-212ENST00000465514 TOPAZ1Q8N9V7 1692 aa14.45□□□□□ -0.1
USP39-212ENST00000465514 CPDO75976 1380 aa14.45□□□□□ -0.1
USP39-212ENST00000465514 CRB1P82279 1406 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms