RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 QPCTQ16769 361 aa7.26□□□□□ -1.25
SNX4-202ENST00000465505 ZNF511Q8NB15 262 aa7.26□□□□□ -1.25
SNX4-202ENST00000465505 PER1O15534 1290 aaPredicted RBP7.25□□□□□ -1.25
SNX4-202ENST00000465505 NUTM2BA6NNL0 878 aaPredicted RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 NUTM2EB1AL46 878 aaPredicted RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 NUTM2DQ5VT03 806 aaPredicted RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 NUTM2AQ8IVF1 878 aaPredicted RBP7.24□□□□□ -1.25
SNX4-202ENST00000465505 MAP10Q9P2G4 905 aa7.24□□□□□ -1.25
SNX4-202ENST00000465505 RTL5Q5HYW3 569 aaPredicted RBP7.23□□□□□ -1.25
SNX4-202ENST00000465505 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
SNX4-202ENST00000465505 MPNDQ8N594 471 aa7.23□□□□□ -1.25
SNX4-202ENST00000465505 WASF2Q9Y6W5 498 aa7.23□□□□□ -1.25
SNX4-202ENST00000465505 SNRPBP14678 240 aaKnown RBP7.22□□□□□ -1.25
SNX4-202ENST00000465505 CLK2P49760 499 aaKnown RBP7.22□□□□□ -1.25
SNX4-202ENST00000465505 TRIM47Q96LD4 638 aa7.22□□□□□ -1.25
SNX4-202ENST00000465505 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
SNX4-202ENST00000465505 POLR3EQ9NVU0 708 aa7.22□□□□□ -1.25
SNX4-202ENST00000465505 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
SNX4-202ENST00000465505 FOXJ1Q92949 421 aa7.21□□□□□ -1.26
SNX4-202ENST00000465505 BCANQ96GW7 911 aa7.21□□□□□ -1.26
SNX4-202ENST00000465505 SENP2Q9HC62 589 aa7.21□□□□□ -1.26
SNX4-202ENST00000465505 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
SNX4-202ENST00000465505 CAPN5O15484 640 aaPredicted RBP7.2□□□□□ -1.26
SNX4-202ENST00000465505 TSC1Q92574 1164 aa7.2□□□□□ -1.26
SNX4-202ENST00000465505 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
SNX4-202ENST00000465505 TRIM46Q7Z4K8 759 aa7.19□□□□□ -1.26
SNX4-202ENST00000465505 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
SNX4-202ENST00000465505 NFX1Q12986 1120 aaKnown RBP7.18□□□□□ -1.26
SNX4-202ENST00000465505 NNTQ13423 1086 aa7.18□□□□□ -1.26
SNX4-202ENST00000465505 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
SNX4-202ENST00000465505 CDK15Q96Q40 435 aa7.18□□□□□ -1.26
SNX4-202ENST00000465505 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
SNX4-202ENST00000465505 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
SNX4-202ENST00000465505 WFS1O76024 890 aa7.17□□□□□ -1.26
SNX4-202ENST00000465505 SKIV2LQ15477 1246 aaKnown RBP7.17□□□□□ -1.26
SNX4-202ENST00000465505 HELBQ8NG08 1087 aaPredicted RBP7.17□□□□□ -1.26
SNX4-202ENST00000465505 KLF16Q9BXK1 252 aaPredicted RBP7.17□□□□□ -1.26
SNX4-202ENST00000465505 FAM117AQ9C073 453 aa7.17□□□□□ -1.26
SNX4-202ENST00000465505 BMP1P13497 986 aa7.16□□□□□ -1.26
SNX4-202ENST00000465505 CTDSPL2Q05D32 466 aa7.16□□□□□ -1.26
SNX4-202ENST00000465505 FBXO31Q5XUX0 539 aaPredicted RBP7.16□□□□□ -1.26
SNX4-202ENST00000465505 BPHLQ86WA6 291 aaPredicted RBP7.16□□□□□ -1.26
SNX4-202ENST00000465505 ARMC2Q8NEN0 867 aa7.16□□□□□ -1.26
SNX4-202ENST00000465505 ADH1CP00326 375 aa7.15□□□□□ -1.26
SNX4-202ENST00000465505 GRM5P41594 1212 aa7.15□□□□□ -1.26
SNX4-202ENST00000465505 AGERQ15109 404 aa7.15□□□□□ -1.26
SNX4-202ENST00000465505 SH3RF1Q7Z6J0 888 aa7.15□□□□□ -1.26
SNX4-202ENST00000465505 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
SNX4-202ENST00000465505 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNX4-202ENST00000465505 TERTO14746 1132 aaKnown RBP7.14□□□□□ -1.27
SNX4-202ENST00000465505 SLC24A1O60721 1099 aa7.14□□□□□ -1.27
SNX4-202ENST00000465505 TIMP2P16035 220 aa7.14□□□□□ -1.27
SNX4-202ENST00000465505 ARID5BQ14865 1188 aa7.14□□□□□ -1.27
SNX4-202ENST00000465505 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
SNX4-202ENST00000465505 DDRGK1Q96HY6 314 aa7.14□□□□□ -1.27
SNX4-202ENST00000465505 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
SNX4-202ENST00000465505 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
SNX4-202ENST00000465505 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
SNX4-202ENST00000465505 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
SNX4-202ENST00000465505 NR3C2P08235 984 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 NR5A1Q13285 461 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 NBPF14Q5TI25 921 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 PPP2R2DQ66LE6 453 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 LRRN4Q8WUT4 740 aa7.12□□□□□ -1.27
SNX4-202ENST00000465505 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
SNX4-202ENST00000465505 TRMT44Q8IYL2 757 aaKnown RBP7.1□□□□□ -1.27
SNX4-202ENST00000465505 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.27
SNX4-202ENST00000465505 ITPKCQ96DU7 683 aa7.1□□□□□ -1.27
SNX4-202ENST00000465505 WIPF1O43516 503 aa7.09□□□□□ -1.27
SNX4-202ENST00000465505 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
SNX4-202ENST00000465505 ZFAND3Q9H8U3 227 aa7.09□□□□□ -1.27
SNX4-202ENST00000465505 NXF1Q9UBU9 619 aaKnown RBP7.09□□□□□ -1.27
SNX4-202ENST00000465505 MAGEB6P1A0A0J9YX57 407 aa7.08□□□□□ -1.28
SNX4-202ENST00000465505 SCARF1Q14162 830 aa7.08□□□□□ -1.28
SNX4-202ENST00000465505 NR6A1Q15406 480 aa7.08□□□□□ -1.28
SNX4-202ENST00000465505 PDXDC2PQ6P474 469 aa7.08□□□□□ -1.28
SNX4-202ENST00000465505 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
SNX4-202ENST00000465505 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
SNX4-202ENST00000465505 ERFEQ4G0M1 354 aa7.07□□□□□ -1.28
SNX4-202ENST00000465505 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
SNX4-202ENST00000465505 FKBPLQ9UIM3 349 aa7.07□□□□□ -1.28
SNX4-202ENST00000465505 ATP1B4Q9UN42 357 aaPredicted RBP7.07□□□□□ -1.28
SNX4-202ENST00000465505 AP1G2O75843 785 aa7.06□□□□□ -1.28
SNX4-202ENST00000465505 NPAS3Q8IXF0 933 aa7.06□□□□□ -1.28
SNX4-202ENST00000465505 CARD14Q9BXL6 1004 aa7.06□□□□□ -1.28
SNX4-202ENST00000465505 FSHRP23945 695 aa7.05□□□□□ -1.28
SNX4-202ENST00000465505 EPS8L1Q8TE68 723 aa7.05□□□□□ -1.28
SNX4-202ENST00000465505 SLC16A10Q8TF71 515 aa7.05□□□□□ -1.28
SNX4-202ENST00000465505 OCSTAMPQ9BR26 566 aa7.05□□□□□ -1.28
SNX4-202ENST00000465505 ARHGAP9Q9BRR9 750 aa7.05□□□□□ -1.28
SNX4-202ENST00000465505 GOPCQ9HD26 462 aa7.04□□□□□ -1.28
SNX4-202ENST00000465505 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
SNX4-202ENST00000465505 SOBPA7XYQ1 873 aa7.03□□□□□ -1.28
SNX4-202ENST00000465505 VEGFBP49765 207 aa7.03□□□□□ -1.28
SNX4-202ENST00000465505 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
SNX4-202ENST00000465505 MEIOBQ8N635 442 aa7.03□□□□□ -1.28
SNX4-202ENST00000465505 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms