RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 USP6P35125 1406 aa25.65■■□□□ 1.7
SCAMP3-204ENST00000465312 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
SCAMP3-204ENST00000465312 MEX3CQ5U5Q3 659 aaKnown RBP25.64■■□□□ 1.7
SCAMP3-204ENST00000465312 NUTM2GQ5VZR2 741 aa25.63■■□□□ 1.69
SCAMP3-204ENST00000465312 SPATA31A6Q5VVP1 1343 aa25.63■■□□□ 1.69
SCAMP3-204ENST00000465312 A0A1W2PP64 1363 aa25.62■■□□□ 1.69
SCAMP3-204ENST00000465312 ABTB2Q8N961 1025 aa25.62■■□□□ 1.69
SCAMP3-204ENST00000465312 MYOM1P52179 1685 aa25.61■■□□□ 1.69
SCAMP3-204ENST00000465312 C11orf95C9JLR9 678 aaPredicted RBP25.61■■□□□ 1.69
SCAMP3-204ENST00000465312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.61■■□□□ 1.69
SCAMP3-204ENST00000465312 CPSF1Q10570 1443 aaKnown RBP25.61■■□□□ 1.69
SCAMP3-204ENST00000465312 MON2Q7Z3U7 1717 aa25.6■■□□□ 1.69
SCAMP3-204ENST00000465312 ANKRD36BQ8N2N9 1353 aa25.59■■□□□ 1.69
SCAMP3-204ENST00000465312 ALS2Q96Q42 1657 aa25.59■■□□□ 1.69
SCAMP3-204ENST00000465312 KIF7Q2M1P5 1343 aa25.59■■□□□ 1.69
SCAMP3-204ENST00000465312 CD163L1Q9NR16 1453 aa25.59■■□□□ 1.69
SCAMP3-204ENST00000465312 BRD4O60885 1362 aaPredicted RBP25.58■■□□□ 1.69
SCAMP3-204ENST00000465312 TTC21BQ7Z4L5 1316 aa25.58■■□□□ 1.69
SCAMP3-204ENST00000465312 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
SCAMP3-204ENST00000465312 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
SCAMP3-204ENST00000465312 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
SCAMP3-204ENST00000465312 NRKQ7Z2Y5 1582 aa25.56■■□□□ 1.68
SCAMP3-204ENST00000465312 EDC4Q6P2E9 1401 aaKnown RBP25.55■■□□□ 1.68
SCAMP3-204ENST00000465312 MED1Q15648 1581 aaPredicted RBP25.55■■□□□ 1.68
SCAMP3-204ENST00000465312 TTC21AQ8NDW8 1320 aa25.55■■□□□ 1.68
SCAMP3-204ENST00000465312 NLRP6P59044 892 aa25.54■■□□□ 1.68
SCAMP3-204ENST00000465312 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
SCAMP3-204ENST00000465312 NLRP13Q86W25 1043 aa25.53■■□□□ 1.68
SCAMP3-204ENST00000465312 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
SCAMP3-204ENST00000465312 LRP6O75581 1613 aa25.52■■□□□ 1.68
SCAMP3-204ENST00000465312 SSH2Q76I76 1423 aa25.51■■□□□ 1.67
SCAMP3-204ENST00000465312 PIK3C2AO00443 1686 aa25.51■■□□□ 1.67
SCAMP3-204ENST00000465312 WASHC2AQ641Q2 1341 aa25.5■■□□□ 1.67
SCAMP3-204ENST00000465312 NME9Q86XW9 330 aa25.5■■□□□ 1.67
SCAMP3-204ENST00000465312 ABCA3Q99758 1704 aa25.49■■□□□ 1.67
SCAMP3-204ENST00000465312 NSD3Q9BZ95 1437 aa25.49■■□□□ 1.67
SCAMP3-204ENST00000465312 C8orf37Q96NL8 207 aa25.49■■□□□ 1.67
SCAMP3-204ENST00000465312 PANK3Q9H999 370 aa25.49■■□□□ 1.67
SCAMP3-204ENST00000465312 SOX12O15370 315 aa25.48■■□□□ 1.67
SCAMP3-204ENST00000465312 ZBTB7CA1YPR0 619 aa25.47■■□□□ 1.67
SCAMP3-204ENST00000465312 PHRF1Q9P1Y6 1649 aaKnown RBP25.46■■□□□ 1.67
SCAMP3-204ENST00000465312 ZRANB1Q9UGI0 708 aa25.45■■□□□ 1.66
SCAMP3-204ENST00000465312 NGLY1Q96IV0 654 aa25.44■■□□□ 1.66
SCAMP3-204ENST00000465312 KIF20BQ96Q89 1820 aa25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 ZC3H6P61129 1189 aaKnown RBP25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 COG3Q96JB2 828 aa25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 CARD14Q9BXL6 1004 aa25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 MARF1Q9Y4F3 1742 aaKnown RBP25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 CRYBG1Q9Y4K1 1723 aa25.43■■□□□ 1.66
SCAMP3-204ENST00000465312 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
SCAMP3-204ENST00000465312 USP19O94966 1318 aa25.41■■□□□ 1.66
SCAMP3-204ENST00000465312 CGNL1Q0VF96 1302 aa25.41■■□□□ 1.66
SCAMP3-204ENST00000465312 PRDM11Q9NQV5 511 aa25.4■■□□□ 1.66
SCAMP3-204ENST00000465312 KNSTRNQ9Y448 316 aa25.4■■□□□ 1.66
SCAMP3-204ENST00000465312 GCP02774 474 aa25.39■■□□□ 1.66
SCAMP3-204ENST00000465312 KCNH5Q8NCM2 988 aa25.38■■□□□ 1.65
SCAMP3-204ENST00000465312 AFF2P51816 1311 aa25.37■■□□□ 1.65
SCAMP3-204ENST00000465312 USP31Q70CQ4 1352 aa25.37■■□□□ 1.65
SCAMP3-204ENST00000465312 KIAA0232Q92628 1395 aa25.37■■□□□ 1.65
SCAMP3-204ENST00000465312 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
SCAMP3-204ENST00000465312 SLIT3O75094 1523 aa25.37■■□□□ 1.65
SCAMP3-204ENST00000465312 FYB1O15117 783 aa25.36■■□□□ 1.65
SCAMP3-204ENST00000465312 CHRNA2Q15822 529 aa25.35■■□□□ 1.65
SCAMP3-204ENST00000465312 OVOS2A0A0J9YW53 1432 aa25.35■■□□□ 1.65
SCAMP3-204ENST00000465312 OVOS2Q6IE36 1432 aa25.35■■□□□ 1.65
SCAMP3-204ENST00000465312 USP54Q70EL1 1684 aa25.33■■□□□ 1.65
SCAMP3-204ENST00000465312 USP21Q9UK80 565 aa25.33■■□□□ 1.65
SCAMP3-204ENST00000465312 COL14A1Q05707 1796 aaKnown RBP25.32■■□□□ 1.64
SCAMP3-204ENST00000465312 PLCH1Q4KWH8 1693 aa25.32■■□□□ 1.64
SCAMP3-204ENST00000465312 FAM83GA6ND36 823 aa25.31■■□□□ 1.64
SCAMP3-204ENST00000465312 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
SCAMP3-204ENST00000465312 ZNF316A6NFI3 1004 aaPredicted RBP25.29■■□□□ 1.64
SCAMP3-204ENST00000465312 BTG4Q9NY30 223 aa25.29■■□□□ 1.64
SCAMP3-204ENST00000465312 TNNT2P45379 298 aaPredicted RBP25.28■■□□□ 1.64
SCAMP3-204ENST00000465312 CCDC9Q9Y3X0 531 aaKnown RBP25.28■■□□□ 1.64
SCAMP3-204ENST00000465312 NFAT5O94916 1531 aa25.27■■□□□ 1.64
SCAMP3-204ENST00000465312 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-204ENST00000465312 CPDO75976 1380 aa25.27■■□□□ 1.64
SCAMP3-204ENST00000465312 NSD2O96028 1365 aa25.27■■□□□ 1.64
SCAMP3-204ENST00000465312 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
SCAMP3-204ENST00000465312 CC2D1BQ5T0F9 858 aaKnown RBP25.26■■□□□ 1.63
SCAMP3-204ENST00000465312 MORC1Q86VD1 984 aa25.26■■□□□ 1.63
SCAMP3-204ENST00000465312 STRN4Q9NRL3 753 aa25.26■■□□□ 1.63
SCAMP3-204ENST00000465312 LTN1O94822 1766 aa25.26■■□□□ 1.63
SCAMP3-204ENST00000465312 EVA1CP58658 441 aa25.25■■□□□ 1.63
SCAMP3-204ENST00000465312 FNBP4Q8N3X1 1017 aaPredicted RBP25.25■■□□□ 1.63
SCAMP3-204ENST00000465312 NWD2Q9ULI1 1742 aa25.24■■□□□ 1.63
SCAMP3-204ENST00000465312 SLIT2O94813 1529 aa25.24■■□□□ 1.63
SCAMP3-204ENST00000465312 ARHGEF25Q86VW2 580 aa25.24■■□□□ 1.63
SCAMP3-204ENST00000465312 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
SCAMP3-204ENST00000465312 FBLN1P23142 703 aa25.23■■□□□ 1.63
SCAMP3-204ENST00000465312 AMPHP49418 695 aa25.22■■□□□ 1.63
SCAMP3-204ENST00000465312 RRS1Q15050 365 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-204ENST00000465312 QTRT2Q9H974 415 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-204ENST00000465312 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-204ENST00000465312 TRPC5Q9UL62 973 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-204ENST00000465312 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
SCAMP3-204ENST00000465312 AATKQ6ZMQ8 1374 aa25.2■■□□□ 1.63
SCAMP3-204ENST00000465312 PER1O15534 1290 aaPredicted RBP25.2■■□□□ 1.62
SCAMP3-204ENST00000465312 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms