RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
XRN1-204ENST00000465074 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
XRN1-204ENST00000465074 ALS2Q96Q42 1657 aa17.3■□□□□ 0.36
XRN1-204ENST00000465074 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
XRN1-204ENST00000465074 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
XRN1-204ENST00000465074 PLEKHG3A1L390 1219 aa17.28■□□□□ 0.36
XRN1-204ENST00000465074 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.36
XRN1-204ENST00000465074 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
XRN1-204ENST00000465074 FAM83GA6ND36 823 aa17.26■□□□□ 0.35
XRN1-204ENST00000465074 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
XRN1-204ENST00000465074 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
XRN1-204ENST00000465074 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
XRN1-204ENST00000465074 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
XRN1-204ENST00000465074 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
XRN1-204ENST00000465074 ATRNO75882 1429 aa17.25■□□□□ 0.35
XRN1-204ENST00000465074 RGS12O14924 1447 aa17.24■□□□□ 0.35
XRN1-204ENST00000465074 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
XRN1-204ENST00000465074 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
XRN1-204ENST00000465074 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
XRN1-204ENST00000465074 SLIT2O94813 1529 aa17.22■□□□□ 0.35
XRN1-204ENST00000465074 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
XRN1-204ENST00000465074 TMC1Q8TDI8 760 aa17.22■□□□□ 0.35
XRN1-204ENST00000465074 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
XRN1-204ENST00000465074 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
XRN1-204ENST00000465074 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
XRN1-204ENST00000465074 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
XRN1-204ENST00000465074 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
XRN1-204ENST00000465074 A0A0G2JS52 829 aa17.2■□□□□ 0.34
XRN1-204ENST00000465074 MYT1Q01538 1121 aa17.2■□□□□ 0.34
XRN1-204ENST00000465074 NWD2Q9ULI1 1742 aa17.2■□□□□ 0.34
XRN1-204ENST00000465074 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
XRN1-204ENST00000465074 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
XRN1-204ENST00000465074 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
XRN1-204ENST00000465074 NLRP6P59044 892 aa17.19■□□□□ 0.34
XRN1-204ENST00000465074 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
XRN1-204ENST00000465074 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
XRN1-204ENST00000465074 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
XRN1-204ENST00000465074 USP6P35125 1406 aa17.18■□□□□ 0.34
XRN1-204ENST00000465074 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
XRN1-204ENST00000465074 VPS72Q15906 364 aa17.17■□□□□ 0.34
XRN1-204ENST00000465074 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
XRN1-204ENST00000465074 GLI3P10071 1580 aa17.16■□□□□ 0.34
XRN1-204ENST00000465074 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
XRN1-204ENST00000465074 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
XRN1-204ENST00000465074 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
XRN1-204ENST00000465074 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
XRN1-204ENST00000465074 SOX12O15370 315 aa17.15■□□□□ 0.34
XRN1-204ENST00000465074 EVA1CP58658 441 aa17.15■□□□□ 0.34
XRN1-204ENST00000465074 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
XRN1-204ENST00000465074 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
XRN1-204ENST00000465074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
XRN1-204ENST00000465074 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
XRN1-204ENST00000465074 GCP02774 474 aa17.13■□□□□ 0.33
XRN1-204ENST00000465074 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
XRN1-204ENST00000465074 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
XRN1-204ENST00000465074 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
XRN1-204ENST00000465074 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
XRN1-204ENST00000465074 USP47Q96K76 1375 aa17.13■□□□□ 0.33
XRN1-204ENST00000465074 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
XRN1-204ENST00000465074 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
XRN1-204ENST00000465074 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
XRN1-204ENST00000465074 PIK3C2AO00443 1686 aa17.12■□□□□ 0.33
XRN1-204ENST00000465074 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
XRN1-204ENST00000465074 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
XRN1-204ENST00000465074 USP19O94966 1318 aa17.11■□□□□ 0.33
XRN1-204ENST00000465074 TESK2Q96S53 571 aa17.1■□□□□ 0.33
XRN1-204ENST00000465074 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
XRN1-204ENST00000465074 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
XRN1-204ENST00000465074 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
XRN1-204ENST00000465074 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
XRN1-204ENST00000465074 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
XRN1-204ENST00000465074 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
XRN1-204ENST00000465074 TMF1P82094 1093 aa17.08■□□□□ 0.32
XRN1-204ENST00000465074 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
XRN1-204ENST00000465074 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
XRN1-204ENST00000465074 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
XRN1-204ENST00000465074 NME9Q86XW9 330 aa17.07■□□□□ 0.32
XRN1-204ENST00000465074 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
XRN1-204ENST00000465074 CPDO75976 1380 aa17.05■□□□□ 0.32
XRN1-204ENST00000465074 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
XRN1-204ENST00000465074 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
XRN1-204ENST00000465074 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
XRN1-204ENST00000465074 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
XRN1-204ENST00000465074 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
XRN1-204ENST00000465074 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
XRN1-204ENST00000465074 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
XRN1-204ENST00000465074 SLIT3O75094 1523 aa17.04■□□□□ 0.32
XRN1-204ENST00000465074 A0A1W2PP64 1363 aa17.03■□□□□ 0.32
XRN1-204ENST00000465074 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
XRN1-204ENST00000465074 PUS7Q96PZ0 661 aaKnown RBP17.03■□□□□ 0.32
XRN1-204ENST00000465074 LMO7Q8WWI1 1683 aa17.02■□□□□ 0.32
XRN1-204ENST00000465074 RGPD5Q99666 1765 aa17.02■□□□□ 0.31
XRN1-204ENST00000465074 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
XRN1-204ENST00000465074 EP400Q96L91 3159 aa17■□□□□ 0.31
XRN1-204ENST00000465074 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
XRN1-204ENST00000465074 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
XRN1-204ENST00000465074 CDCA8Q53HL2 280 aa17■□□□□ 0.31
XRN1-204ENST00000465074 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
XRN1-204ENST00000465074 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
XRN1-204ENST00000465074 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms