RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 MON2Q7Z3U7 1717 aa16.83■□□□□ 0.28
RPUSD3-211ENST00000464783 USP6P35125 1406 aa16.81■□□□□ 0.28
RPUSD3-211ENST00000464783 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
RPUSD3-211ENST00000464783 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
RPUSD3-211ENST00000464783 C8orf37Q96NL8 207 aa16.81■□□□□ 0.28
RPUSD3-211ENST00000464783 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
RPUSD3-211ENST00000464783 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
RPUSD3-211ENST00000464783 CRYBG1Q9Y4K1 1723 aa16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
RPUSD3-211ENST00000464783 NINLQ9Y2I6 1382 aa16.78■□□□□ 0.28
RPUSD3-211ENST00000464783 NUTM2GQ5VZR2 741 aa16.78■□□□□ 0.28
RPUSD3-211ENST00000464783 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
RPUSD3-211ENST00000464783 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-211ENST00000464783 NGLY1Q96IV0 654 aa16.77■□□□□ 0.28
RPUSD3-211ENST00000464783 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
RPUSD3-211ENST00000464783 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.28
RPUSD3-211ENST00000464783 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
RPUSD3-211ENST00000464783 MYOM1P52179 1685 aa16.76■□□□□ 0.27
RPUSD3-211ENST00000464783 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
RPUSD3-211ENST00000464783 AFF2P51816 1311 aa16.75■□□□□ 0.27
RPUSD3-211ENST00000464783 ZNF772Q68DY9 489 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-211ENST00000464783 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
RPUSD3-211ENST00000464783 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
RPUSD3-211ENST00000464783 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
RPUSD3-211ENST00000464783 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
RPUSD3-211ENST00000464783 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
RPUSD3-211ENST00000464783 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
RPUSD3-211ENST00000464783 RGS17Q9UGC6 210 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-211ENST00000464783 NLRP6P59044 892 aa16.72■□□□□ 0.27
RPUSD3-211ENST00000464783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPUSD3-211ENST00000464783 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-211ENST00000464783 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-211ENST00000464783 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
RPUSD3-211ENST00000464783 USP21Q9UK80 565 aa16.71■□□□□ 0.27
RPUSD3-211ENST00000464783 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
RPUSD3-211ENST00000464783 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-211ENST00000464783 KIF20BQ96Q89 1820 aa16.69■□□□□ 0.26
RPUSD3-211ENST00000464783 USP19O94966 1318 aa16.69■□□□□ 0.26
RPUSD3-211ENST00000464783 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-211ENST00000464783 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
RPUSD3-211ENST00000464783 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
RPUSD3-211ENST00000464783 SLIT3O75094 1523 aa16.68■□□□□ 0.26
RPUSD3-211ENST00000464783 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
RPUSD3-211ENST00000464783 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-211ENST00000464783 KIAA0232Q92628 1395 aa16.66■□□□□ 0.26
RPUSD3-211ENST00000464783 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
RPUSD3-211ENST00000464783 NME9Q86XW9 330 aa16.66■□□□□ 0.26
RPUSD3-211ENST00000464783 SLIT2O94813 1529 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 SOX12O15370 315 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 GCP02774 474 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 QTRT2Q9H974 415 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 TRPC5Q9UL62 973 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-211ENST00000464783 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
RPUSD3-211ENST00000464783 BCL9LQ86UU0 1499 aa16.64■□□□□ 0.25
RPUSD3-211ENST00000464783 LTN1O94822 1766 aa16.64■□□□□ 0.25
RPUSD3-211ENST00000464783 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 RXRBP28702 533 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 UNC5CLQ8IV45 518 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
RPUSD3-211ENST00000464783 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
RPUSD3-211ENST00000464783 CPDO75976 1380 aa16.62■□□□□ 0.25
RPUSD3-211ENST00000464783 ATRNO75882 1429 aa16.62■□□□□ 0.25
RPUSD3-211ENST00000464783 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 COG3Q96JB2 828 aa16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 OVOS2A0A0J9YW53 1432 aa16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 OVOS2Q6IE36 1432 aa16.61■□□□□ 0.25
RPUSD3-211ENST00000464783 NFAT5O94916 1531 aa16.6■□□□□ 0.25
RPUSD3-211ENST00000464783 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
RPUSD3-211ENST00000464783 RGPD5Q99666 1765 aa16.6■□□□□ 0.25
RPUSD3-211ENST00000464783 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
RPUSD3-211ENST00000464783 CARD14Q9BXL6 1004 aa16.58■□□□□ 0.24
RPUSD3-211ENST00000464783 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
RPUSD3-211ENST00000464783 PANK3Q9H999 370 aa16.58■□□□□ 0.24
RPUSD3-211ENST00000464783 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
RPUSD3-211ENST00000464783 COL18A1P39060 1754 aa16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 ANKRD26Q9UPS8 1709 aa16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 EVA1CP58658 441 aa16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 VPS72Q15906 364 aa16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 GJD4Q96KN9 370 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-211ENST00000464783 GLI3P10071 1580 aa16.56■□□□□ 0.24
RPUSD3-211ENST00000464783 CCDC7Q96M83 1385 aa16.56■□□□□ 0.24
RPUSD3-211ENST00000464783 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
RPUSD3-211ENST00000464783 FYB1O15117 783 aa16.56■□□□□ 0.24
RPUSD3-211ENST00000464783 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-211ENST00000464783 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms