RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GJD4Q96KN9 370 aaPredicted RBP37.12■■■■□ 3.53
U2AF1-206ENST00000464750 POLR3AO14802 1390 aaPredicted RBP37.12■■■■□ 3.53
U2AF1-206ENST00000464750 ROCK2O75116 1388 aaKnown RBP37.12■■■■□ 3.53
U2AF1-206ENST00000464750 RALGAPBQ86X10 1494 aa37.11■■■■□ 3.53
U2AF1-206ENST00000464750 SRPK2P78362 688 aaKnown RBP37.09■■■■□ 3.53
U2AF1-206ENST00000464750 ACEP12821 1306 aa37.09■■■■□ 3.53
U2AF1-206ENST00000464750 NRAPQ86VF7 1730 aa37.07■■■■□ 3.53
U2AF1-206ENST00000464750 COL14A1Q05707 1796 aaKnown RBP37.07■■■■□ 3.53
U2AF1-206ENST00000464750 PHRF1Q9P1Y6 1649 aaKnown RBP37.07■■■■□ 3.52
U2AF1-206ENST00000464750 PLEKHG3A1L390 1219 aa37.06■■■■□ 3.52
U2AF1-206ENST00000464750 ATAD2Q6PL18 1390 aa37.05■■■■□ 3.52
U2AF1-206ENST00000464750 PPIP5K1Q6PFW1 1433 aa37.05■■■■□ 3.52
U2AF1-206ENST00000464750 FAM83GA6ND36 823 aa37.04■■■■□ 3.52
U2AF1-206ENST00000464750 CABP2Q9NPB3 220 aa37.04■■■■□ 3.52
U2AF1-206ENST00000464750 NBPF8Q3BBV2 869 aa37.03■■■■□ 3.52
U2AF1-206ENST00000464750 VPS72Q15906 364 aa37.01■■■■□ 3.52
U2AF1-206ENST00000464750 TONSLQ96HA7 1378 aa37■■■■□ 3.51
U2AF1-206ENST00000464750 BRWD3Q6RI45 1802 aa36.97■■■■□ 3.51
U2AF1-206ENST00000464750 CCDC9Q9Y3X0 531 aaKnown RBP36.96■■■■□ 3.51
U2AF1-206ENST00000464750 EVC2Q86UK5 1308 aa36.95■■■■□ 3.51
U2AF1-206ENST00000464750 NUTM2GQ5VZR2 741 aa36.94■■■■□ 3.5
U2AF1-206ENST00000464750 BTG4Q9NY30 223 aa36.94■■■■□ 3.5
U2AF1-206ENST00000464750 NRKQ7Z2Y5 1582 aa36.92■■■■□ 3.5
U2AF1-206ENST00000464750 PRDM11Q9NQV5 511 aa36.91■■■■□ 3.5
U2AF1-206ENST00000464750 EP400Q96L91 3159 aa36.9■■■■□ 3.5
U2AF1-206ENST00000464750 KIAA0232Q92628 1395 aa36.9■■■■□ 3.5
U2AF1-206ENST00000464750 CABP1Q9NZU7 370 aa36.89■■■■□ 3.5
U2AF1-206ENST00000464750 ABTB2Q8N961 1025 aa36.88■■■■□ 3.49
U2AF1-206ENST00000464750 USP6P35125 1406 aa36.87■■■■□ 3.49
U2AF1-206ENST00000464750 CARD11Q9BXL7 1154 aa36.86■■■■□ 3.49
U2AF1-206ENST00000464750 BRD4O60885 1362 aaPredicted RBP36.86■■■■□ 3.49
U2AF1-206ENST00000464750 SEPT12Q8IYM1 358 aa36.85■■■■□ 3.49
U2AF1-206ENST00000464750 USP19O94966 1318 aa36.84■■■■□ 3.49
U2AF1-206ENST00000464750 AKAP12Q02952 1782 aa36.83■■■■□ 3.49
U2AF1-206ENST00000464750 ZC3H6P61129 1189 aaKnown RBP36.82■■■■□ 3.48
U2AF1-206ENST00000464750 SBNO2Q9Y2G9 1366 aa36.81■■■■□ 3.48
U2AF1-206ENST00000464750 ONECUT3O60422 494 aaPredicted RBP36.81■■■■□ 3.48
U2AF1-206ENST00000464750 CHRNA2Q15822 529 aa36.81■■■■□ 3.48
U2AF1-206ENST00000464750 PIK3C2AO00443 1686 aa36.78■■■■□ 3.48
U2AF1-206ENST00000464750 NLRP13Q86W25 1043 aa36.78■■■■□ 3.48
U2AF1-206ENST00000464750 A0A0G2JS52 829 aa36.77■■■■□ 3.48
U2AF1-206ENST00000464750 MYT1Q01538 1121 aa36.77■■■■□ 3.48
U2AF1-206ENST00000464750 SPATA31A5Q5VU36 1347 aa36.77■■■■□ 3.48
U2AF1-206ENST00000464750 SPATA31A7Q8IWB4 1347 aa36.77■■■■□ 3.48
U2AF1-206ENST00000464750 SSH2Q76I76 1423 aa36.76■■■■□ 3.48
U2AF1-206ENST00000464750 FAM98CQ17RN3 349 aaKnown RBP36.76■■■■□ 3.48
U2AF1-206ENST00000464750 LMO7Q8WWI1 1683 aa36.75■■■■□ 3.47
U2AF1-206ENST00000464750 CPDO75976 1380 aa36.75■■■■□ 3.47
U2AF1-206ENST00000464750 SLIT3O75094 1523 aa36.73■■■■□ 3.47
U2AF1-206ENST00000464750 THSD7AQ9UPZ6 1657 aa36.73■■■■□ 3.47
U2AF1-206ENST00000464750 CCDC125Q86Z20 511 aa36.72■■■■□ 3.47
U2AF1-206ENST00000464750 KRT27Q7Z3Y8 459 aa36.71■■■■□ 3.47
U2AF1-206ENST00000464750 STRN4Q9NRL3 753 aa36.71■■■■□ 3.47
U2AF1-206ENST00000464750 MON2Q7Z3U7 1717 aa36.71■■■■□ 3.47
U2AF1-206ENST00000464750 GCP02774 474 aa36.7■■■■□ 3.47
U2AF1-206ENST00000464750 CAMTA1Q9Y6Y1 1673 aa36.7■■■■□ 3.47
U2AF1-206ENST00000464750 NLRP6P59044 892 aa36.69■■■■□ 3.46
U2AF1-206ENST00000464750 BLMP54132 1417 aaPredicted RBP36.68■■■■□ 3.46
U2AF1-206ENST00000464750 CPSF1Q10570 1443 aaKnown RBP36.68■■■■□ 3.46
U2AF1-206ENST00000464750 ZNF692Q9BU19 519 aaPredicted RBP36.67■■■■□ 3.46
U2AF1-206ENST00000464750 SPATA31A1Q5TZJ5 1347 aa36.66■■■■□ 3.46
U2AF1-206ENST00000464750 TTC21BQ7Z4L5 1316 aa36.64■■■■□ 3.46
U2AF1-206ENST00000464750 KTN1Q86UP2 1357 aaKnown RBP36.63■■■■□ 3.45
U2AF1-206ENST00000464750 EVA1CP58658 441 aa36.62■■■■□ 3.45
U2AF1-206ENST00000464750 TTC21AQ8NDW8 1320 aa36.6■■■■□ 3.45
U2AF1-206ENST00000464750 COL5A2P05997 1499 aaPredicted RBP36.59■■■■□ 3.45
U2AF1-206ENST00000464750 CD163L1Q9NR16 1453 aa36.58■■■■□ 3.45
U2AF1-206ENST00000464750 ZBTB7CA1YPR0 619 aa36.58■■■■□ 3.45
U2AF1-206ENST00000464750 USP35Q9P2H5 1018 aa36.57■■■■□ 3.44
U2AF1-206ENST00000464750 LARP1Q6PKG0 1096 aaKnown RBP36.56■■■■□ 3.44
U2AF1-206ENST00000464750 COL18A1P39060 1754 aa36.55■■■■□ 3.44
U2AF1-206ENST00000464750 AATKQ6ZMQ8 1374 aa36.54■■■■□ 3.44
U2AF1-206ENST00000464750 SF3B2Q13435 895 aaKnown RBP36.54■■■■□ 3.44
U2AF1-206ENST00000464750 TMC1Q8TDI8 760 aa36.54■■■■□ 3.44
U2AF1-206ENST00000464750 USP54Q70EL1 1684 aa36.52■■■■□ 3.44
U2AF1-206ENST00000464750 RGPD1P0DJD0 1748 aa36.52■■■■□ 3.44
U2AF1-206ENST00000464750 ST20-MTHFSA0A0A6YYL1 179 aa36.52■■■■□ 3.44
U2AF1-206ENST00000464750 TESK2Q96S53 571 aa36.51■■■■□ 3.44
U2AF1-206ENST00000464750 NFAT5O94916 1531 aa36.5■■■■□ 3.43
U2AF1-206ENST00000464750 BARGINQ6ZT62 677 aa36.5■■■■□ 3.43
U2AF1-206ENST00000464750 DEFB132Q7Z7B7 95 aa36.5■■■■□ 3.43
U2AF1-206ENST00000464750 FAM182BQ5T319 152 aa36.49■■■■□ 3.43
U2AF1-206ENST00000464750 KCNH5Q8NCM2 988 aa36.49■■■■□ 3.43
U2AF1-206ENST00000464750 SLC12A5Q9H2X9 1139 aa36.49■■■■□ 3.43
U2AF1-206ENST00000464750 SOX12O15370 315 aa36.48■■■■□ 3.43
U2AF1-206ENST00000464750 HDGFL2Q7Z4V5 671 aaPredicted RBP36.48■■■■□ 3.43
U2AF1-206ENST00000464750 TCP11L2Q8N4U5 519 aa36.48■■■■□ 3.43
U2AF1-206ENST00000464750 PUS7Q96PZ0 661 aaKnown RBP36.48■■■■□ 3.43
U2AF1-206ENST00000464750 PCGF6Q9BYE7 350 aa36.48■■■■□ 3.43
U2AF1-206ENST00000464750 RGPD5Q99666 1765 aa36.48■■■■□ 3.43
U2AF1-206ENST00000464750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.47■■■■□ 3.43
U2AF1-206ENST00000464750 CRB1P82279 1406 aa36.47■■■■□ 3.43
U2AF1-206ENST00000464750 PARP4Q9UKK3 1724 aaKnown RBP36.45■■■■□ 3.43
U2AF1-206ENST00000464750 A0A1W2PP64 1363 aa36.45■■■■□ 3.43
U2AF1-206ENST00000464750 USP47Q96K76 1375 aa36.45■■■■□ 3.43
U2AF1-206ENST00000464750 TNS1Q9HBL0 1735 aaKnown RBP36.45■■■■□ 3.43
U2AF1-206ENST00000464750 EDC4Q6P2E9 1401 aaKnown RBP36.44■■■■□ 3.42
U2AF1-206ENST00000464750 USP31Q70CQ4 1352 aa36.44■■■■□ 3.42
U2AF1-206ENST00000464750 ZRANB1Q9UGI0 708 aa36.44■■■■□ 3.42
U2AF1-206ENST00000464750 CLSPNQ9HAW4 1339 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms