RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 SSH2Q76I76 1423 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 UBAP1LF5GYI3 381 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 NME9Q86XW9 330 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
SUPT20H-204ENST00000464572 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
SUPT20H-204ENST00000464572 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
SUPT20H-204ENST00000464572 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
SUPT20H-204ENST00000464572 ZRANB1Q9UGI0 708 aa17.37■□□□□ 0.37
SUPT20H-204ENST00000464572 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
SUPT20H-204ENST00000464572 NSD2O96028 1365 aa17.37■□□□□ 0.37
SUPT20H-204ENST00000464572 RALBP1Q15311 655 aa17.36■□□□□ 0.37
SUPT20H-204ENST00000464572 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
SUPT20H-204ENST00000464572 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
SUPT20H-204ENST00000464572 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
SUPT20H-204ENST00000464572 PARD3Q8TEW0 1356 aa17.36■□□□□ 0.37
SUPT20H-204ENST00000464572 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
SUPT20H-204ENST00000464572 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
SUPT20H-204ENST00000464572 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
SUPT20H-204ENST00000464572 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
SUPT20H-204ENST00000464572 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
SUPT20H-204ENST00000464572 COG3Q96JB2 828 aa17.34■□□□□ 0.37
SUPT20H-204ENST00000464572 PXDNQ92626 1479 aa17.33■□□□□ 0.37
SUPT20H-204ENST00000464572 NLRP6P59044 892 aa17.33■□□□□ 0.37
SUPT20H-204ENST00000464572 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.36
SUPT20H-204ENST00000464572 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
SUPT20H-204ENST00000464572 PIK3C2AO00443 1686 aa17.31■□□□□ 0.36
SUPT20H-204ENST00000464572 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
SUPT20H-204ENST00000464572 NHSL1Q5SYE7 1610 aa17.31■□□□□ 0.36
SUPT20H-204ENST00000464572 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
SUPT20H-204ENST00000464572 NLRP13Q86W25 1043 aa17.29■□□□□ 0.36
SUPT20H-204ENST00000464572 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
SUPT20H-204ENST00000464572 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
SUPT20H-204ENST00000464572 FBLN1P23142 703 aa17.28■□□□□ 0.36
SUPT20H-204ENST00000464572 PPP2R1AP30153 589 aa17.28■□□□□ 0.36
SUPT20H-204ENST00000464572 SOX12O15370 315 aa17.27■□□□□ 0.36
SUPT20H-204ENST00000464572 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
SUPT20H-204ENST00000464572 ALS2Q96Q42 1657 aa17.27■□□□□ 0.35
SUPT20H-204ENST00000464572 ARHGEF10O15013 1369 aa17.25■□□□□ 0.35
SUPT20H-204ENST00000464572 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
SUPT20H-204ENST00000464572 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
SUPT20H-204ENST00000464572 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
SUPT20H-204ENST00000464572 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
SUPT20H-204ENST00000464572 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
SUPT20H-204ENST00000464572 PHLPP1O60346 1717 aa17.23■□□□□ 0.35
SUPT20H-204ENST00000464572 MTHFSP49914 203 aa17.23■□□□□ 0.35
SUPT20H-204ENST00000464572 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
SUPT20H-204ENST00000464572 CABLES1Q8TDN4 633 aa17.22■□□□□ 0.35
SUPT20H-204ENST00000464572 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
SUPT20H-204ENST00000464572 USP19O94966 1318 aa17.22■□□□□ 0.35
SUPT20H-204ENST00000464572 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
SUPT20H-204ENST00000464572 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
SUPT20H-204ENST00000464572 GCP02774 474 aa17.21■□□□□ 0.35
SUPT20H-204ENST00000464572 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
SUPT20H-204ENST00000464572 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
SUPT20H-204ENST00000464572 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
SUPT20H-204ENST00000464572 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
SUPT20H-204ENST00000464572 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-204ENST00000464572 MED1Q15648 1581 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-204ENST00000464572 SLIT3O75094 1523 aa17.19■□□□□ 0.34
SUPT20H-204ENST00000464572 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
SUPT20H-204ENST00000464572 NFAT5O94916 1531 aa17.17■□□□□ 0.34
SUPT20H-204ENST00000464572 PNPLA6Q8IY17 1366 aa17.16■□□□□ 0.34
SUPT20H-204ENST00000464572 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
SUPT20H-204ENST00000464572 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
SUPT20H-204ENST00000464572 ZC3H6P61129 1189 aaKnown RBP17.16■□□□□ 0.34
SUPT20H-204ENST00000464572 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
SUPT20H-204ENST00000464572 AMPHP49418 695 aa17.15■□□□□ 0.34
SUPT20H-204ENST00000464572 PHRF1Q9P1Y6 1649 aaKnown RBP17.15■□□□□ 0.34
SUPT20H-204ENST00000464572 HSPA1LP34931 641 aa17.15■□□□□ 0.34
SUPT20H-204ENST00000464572 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
SUPT20H-204ENST00000464572 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
SUPT20H-204ENST00000464572 ARHGEF25Q86VW2 580 aa17.14■□□□□ 0.33
SUPT20H-204ENST00000464572 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
SUPT20H-204ENST00000464572 LTN1O94822 1766 aa17.12■□□□□ 0.33
SUPT20H-204ENST00000464572 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
SUPT20H-204ENST00000464572 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
SUPT20H-204ENST00000464572 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
SUPT20H-204ENST00000464572 FLT4P35916 1363 aa17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 HOXC9P31274 260 aa17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 JCADQ9P266 1359 aa17.11■□□□□ 0.33
SUPT20H-204ENST00000464572 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
SUPT20H-204ENST00000464572 INSRP06213 1382 aa17.1■□□□□ 0.33
SUPT20H-204ENST00000464572 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
SUPT20H-204ENST00000464572 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
SUPT20H-204ENST00000464572 IP6K1Q92551 441 aa17.1■□□□□ 0.33
SUPT20H-204ENST00000464572 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
SUPT20H-204ENST00000464572 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
SUPT20H-204ENST00000464572 PRDM11Q9NQV5 511 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms