RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-211ENST00000464520 UNC5CLQ8IV45 518 aa34.94■■■■□ 3.18
ABCA2-211ENST00000464520 ATRNO75882 1429 aa34.94■■■■□ 3.18
ABCA2-211ENST00000464520 MARF1Q9Y4F3 1742 aaKnown RBP34.93■■■■□ 3.18
ABCA2-211ENST00000464520 SBNO2Q9Y2G9 1366 aa34.93■■■■□ 3.18
ABCA2-211ENST00000464520 TOPAZ1Q8N9V7 1692 aa34.92■■■■□ 3.18
ABCA2-211ENST00000464520 PLEKHG5O94827 1062 aa34.92■■■■□ 3.18
ABCA2-211ENST00000464520 CABP1Q9NZU7 370 aa34.92■■■■□ 3.18
ABCA2-211ENST00000464520 SLIT2O94813 1529 aa34.91■■■■□ 3.18
ABCA2-211ENST00000464520 BRD4O60885 1362 aaPredicted RBP34.91■■■■□ 3.18
ABCA2-211ENST00000464520 ALS2Q96Q42 1657 aa34.91■■■■□ 3.18
ABCA2-211ENST00000464520 FAM83GA6ND36 823 aa34.87■■■■□ 3.17
ABCA2-211ENST00000464520 GJD4Q96KN9 370 aaPredicted RBP34.87■■■■□ 3.17
ABCA2-211ENST00000464520 SLC24A1O60721 1099 aa34.84■■■■□ 3.17
ABCA2-211ENST00000464520 ABTB2Q8N961 1025 aa34.84■■■■□ 3.17
ABCA2-211ENST00000464520 ZNF692Q9BU19 519 aaPredicted RBP34.84■■■■□ 3.17
ABCA2-211ENST00000464520 ATAD2Q6PL18 1390 aa34.84■■■■□ 3.17
ABCA2-211ENST00000464520 RGS12O14924 1447 aa34.81■■■■□ 3.16
ABCA2-211ENST00000464520 VPS72Q15906 364 aa34.8■■■■□ 3.16
ABCA2-211ENST00000464520 NLRP13Q86W25 1043 aa34.79■■■■□ 3.16
ABCA2-211ENST00000464520 PUS7Q96PZ0 661 aaKnown RBP34.79■■■■□ 3.16
ABCA2-211ENST00000464520 ABCA3Q99758 1704 aa34.78■■■■□ 3.16
ABCA2-211ENST00000464520 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.78■■■■□ 3.16
ABCA2-211ENST00000464520 NUTM2GQ5VZR2 741 aa34.77■■■■□ 3.16
ABCA2-211ENST00000464520 USP6P35125 1406 aa34.76■■■■□ 3.16
ABCA2-211ENST00000464520 PRDM11Q9NQV5 511 aa34.76■■■■□ 3.16
ABCA2-211ENST00000464520 BTG4Q9NY30 223 aa34.74■■■■□ 3.15
ABCA2-211ENST00000464520 NWD2Q9ULI1 1742 aa34.73■■■■□ 3.15
ABCA2-211ENST00000464520 UPF1Q92900 1129 aaKnown RBP eCLIP34.73■■■■□ 3.15
ABCA2-211ENST00000464520 USP19O94966 1318 aa34.72■■■■□ 3.15
ABCA2-211ENST00000464520 ST20-MTHFSA0A0A6YYL1 179 aa34.71■■■■□ 3.15
ABCA2-211ENST00000464520 SSH2Q76I76 1423 aa34.71■■■■□ 3.15
ABCA2-211ENST00000464520 TESK2Q96S53 571 aa34.69■■■■□ 3.14
ABCA2-211ENST00000464520 KIAA0232Q92628 1395 aa34.69■■■■□ 3.14
ABCA2-211ENST00000464520 ONECUT3O60422 494 aaPredicted RBP34.68■■■■□ 3.14
ABCA2-211ENST00000464520 NLRP6P59044 892 aa34.68■■■■□ 3.14
ABCA2-211ENST00000464520 ZC3H6P61129 1189 aaKnown RBP34.68■■■■□ 3.14
ABCA2-211ENST00000464520 COL14A1Q05707 1796 aaKnown RBP34.68■■■■□ 3.14
ABCA2-211ENST00000464520 CCER1Q8TC90 406 aaPredicted RBP34.68■■■■□ 3.14
ABCA2-211ENST00000464520 CCDC9Q9Y3X0 531 aaKnown RBP34.68■■■■□ 3.14
ABCA2-211ENST00000464520 CRYBG1Q9Y4K1 1723 aa34.68■■■■□ 3.14
ABCA2-211ENST00000464520 CPSF1Q10570 1443 aaKnown RBP34.67■■■■□ 3.14
ABCA2-211ENST00000464520 GCP02774 474 aa34.67■■■■□ 3.14
ABCA2-211ENST00000464520 PLCH1Q4KWH8 1693 aa34.66■■■■□ 3.14
ABCA2-211ENST00000464520 CPDO75976 1380 aa34.65■■■■□ 3.14
ABCA2-211ENST00000464520 TTC21BQ7Z4L5 1316 aa34.65■■■■□ 3.14
ABCA2-211ENST00000464520 TTC21AQ8NDW8 1320 aa34.65■■■■□ 3.14
ABCA2-211ENST00000464520 KTN1Q86UP2 1357 aaKnown RBP34.62■■■■□ 3.13
ABCA2-211ENST00000464520 TMC1Q8TDI8 760 aa34.62■■■■□ 3.13
ABCA2-211ENST00000464520 GLI3P10071 1580 aa34.62■■■■□ 3.13
ABCA2-211ENST00000464520 CHRNA2Q15822 529 aa34.61■■■■□ 3.13
ABCA2-211ENST00000464520 HDGFL2Q7Z4V5 671 aaPredicted RBP34.6■■■■□ 3.13
ABCA2-211ENST00000464520 USP47Q96K76 1375 aa34.6■■■■□ 3.13
ABCA2-211ENST00000464520 PHRF1Q9P1Y6 1649 aaKnown RBP34.59■■■■□ 3.13
ABCA2-211ENST00000464520 SLC12A5Q9H2X9 1139 aa34.59■■■■□ 3.13
ABCA2-211ENST00000464520 TERF2IPQ9NYB0 399 aa34.59■■■■□ 3.13
ABCA2-211ENST00000464520 SEPT12Q8IYM1 358 aa34.58■■■■□ 3.13
ABCA2-211ENST00000464520 SPATA31A5Q5VU36 1347 aa34.57■■■■□ 3.13
ABCA2-211ENST00000464520 SPATA31A7Q8IWB4 1347 aa34.57■■■■□ 3.13
ABCA2-211ENST00000464520 NINLQ9Y2I6 1382 aa34.56■■■■□ 3.12
ABCA2-211ENST00000464520 EVA1CP58658 441 aa34.55■■■■□ 3.12
ABCA2-211ENST00000464520 TMF1P82094 1093 aa34.55■■■■□ 3.12
ABCA2-211ENST00000464520 KCNH5Q8NCM2 988 aa34.55■■■■□ 3.12
ABCA2-211ENST00000464520 NRAPQ86VF7 1730 aa34.54■■■■□ 3.12
ABCA2-211ENST00000464520 NRKQ7Z2Y5 1582 aa34.53■■■■□ 3.12
ABCA2-211ENST00000464520 AKAP12Q02952 1782 aa34.53■■■■□ 3.12
ABCA2-211ENST00000464520 CDCA8Q53HL2 280 aa34.51■■■■□ 3.12
ABCA2-211ENST00000464520 CCDC125Q86Z20 511 aa34.51■■■■□ 3.12
ABCA2-211ENST00000464520 STRN4Q9NRL3 753 aa34.51■■■■□ 3.12
ABCA2-211ENST00000464520 CD163L1Q9NR16 1453 aa34.51■■■■□ 3.11
ABCA2-211ENST00000464520 SLIT3O75094 1523 aa34.5■■■■□ 3.11
ABCA2-211ENST00000464520 FAM98CQ17RN3 349 aaKnown RBP34.5■■■■□ 3.11
ABCA2-211ENST00000464520 SPATA31A1Q5TZJ5 1347 aa34.49■■■■□ 3.11
ABCA2-211ENST00000464520 AATKQ6ZMQ8 1374 aa34.48■■■■□ 3.11
ABCA2-211ENST00000464520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.47■■■■□ 3.11
ABCA2-211ENST00000464520 PIK3C2AO00443 1686 aa34.47■■■■□ 3.11
ABCA2-211ENST00000464520 USP31Q70CQ4 1352 aa34.47■■■■□ 3.11
ABCA2-211ENST00000464520 KRT27Q7Z3Y8 459 aa34.46■■■■□ 3.11
ABCA2-211ENST00000464520 EDC4Q6P2E9 1401 aaKnown RBP34.46■■■■□ 3.11
ABCA2-211ENST00000464520 A0A0G2JS52 829 aa34.45■■■■□ 3.11
ABCA2-211ENST00000464520 MYT1Q01538 1121 aa34.45■■■■□ 3.11
ABCA2-211ENST00000464520 CAMTA1Q9Y6Y1 1673 aa34.44■■■■□ 3.1
ABCA2-211ENST00000464520 ARHGEF25Q86VW2 580 aa34.43■■■■□ 3.1
ABCA2-211ENST00000464520 A0A1W2PP64 1363 aa34.43■■■■□ 3.1
ABCA2-211ENST00000464520 MON2Q7Z3U7 1717 aa34.42■■■■□ 3.1
ABCA2-211ENST00000464520 LARP1Q6PKG0 1096 aaKnown RBP34.41■■■■□ 3.1
ABCA2-211ENST00000464520 BARGINQ6ZT62 677 aa34.4■■■■□ 3.1
ABCA2-211ENST00000464520 NME9Q86XW9 330 aa34.4■■■■□ 3.1
ABCA2-211ENST00000464520 LMO7Q8WWI1 1683 aa34.39■■■■□ 3.1
ABCA2-211ENST00000464520 ZBTB7CA1YPR0 619 aa34.39■■■■□ 3.1
ABCA2-211ENST00000464520 THRAP3Q9Y2W1 955 aaKnown RBP34.39■■■■□ 3.1
ABCA2-211ENST00000464520 TCP11L2Q8N4U5 519 aa34.37■■■■□ 3.09
ABCA2-211ENST00000464520 ANKRD36BQ8N2N9 1353 aa34.36■■■■□ 3.09
ABCA2-211ENST00000464520 COL5A2P05997 1499 aaPredicted RBP34.35■■■■□ 3.09
ABCA2-211ENST00000464520 EP400Q96L91 3159 aa34.35■■■■□ 3.09
ABCA2-211ENST00000464520 USP35Q9P2H5 1018 aa34.35■■■■□ 3.09
ABCA2-211ENST00000464520 ZRANB1Q9UGI0 708 aa34.35■■■■□ 3.09
ABCA2-211ENST00000464520 SOX12O15370 315 aa34.34■■■■□ 3.09
ABCA2-211ENST00000464520 AXIN2Q9Y2T1 843 aa34.32■■■■□ 3.08
ABCA2-211ENST00000464520 BRWD3Q6RI45 1802 aa34.32■■■■□ 3.08
ABCA2-211ENST00000464520 BLMP54132 1417 aaPredicted RBP34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms