RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-205ENST00000464480 ZC3H4Q9UPT8 1303 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 RGS20O76081 388 aa7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 TJAP1Q5JTD0 557 aa7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 GLMNQ92990 594 aa7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 PRDM9Q9NQV7 894 aa7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 MAP10Q9P2G4 905 aa7.01□□□□□ -1.29
HMGXB4-205ENST00000464480 A0A0G2JS52 829 aa7□□□□□ -1.29
HMGXB4-205ENST00000464480 POM121CA8CG34 1229 aa7□□□□□ -1.29
HMGXB4-205ENST00000464480 VAC14Q08AM6 782 aa7□□□□□ -1.29
HMGXB4-205ENST00000464480 SLC6A16Q9GZN6 736 aa7□□□□□ -1.29
HMGXB4-205ENST00000464480 FKBPLQ9UIM3 349 aa7□□□□□ -1.29
HMGXB4-205ENST00000464480 SOX11P35716 441 aa6.99□□□□□ -1.29
HMGXB4-205ENST00000464480 GGCXP38435 758 aa6.99□□□□□ -1.29
HMGXB4-205ENST00000464480 KCNH2Q12809 1159 aa6.99□□□□□ -1.29
HMGXB4-205ENST00000464480 ARMC2Q8NEN0 867 aa6.99□□□□□ -1.29
HMGXB4-205ENST00000464480 EVA1BQ9NVM1 165 aa6.99□□□□□ -1.29
HMGXB4-205ENST00000464480 NBPF14Q5TI25 921 aa6.98□□□□□ -1.29
HMGXB4-205ENST00000464480 ZNF516Q92618 1163 aa6.98□□□□□ -1.29
HMGXB4-205ENST00000464480 GPKOWQ92917 476 aaPredicted RBP eCLIP6.98□□□□□ -1.29
HMGXB4-205ENST00000464480 ZBBXA8MT70 800 aa6.97□□□□□ -1.29
HMGXB4-205ENST00000464480 EIF4G2P78344 907 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGXB4-205ENST00000464480 NR1H3Q13133 447 aa6.97□□□□□ -1.29
HMGXB4-205ENST00000464480 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
HMGXB4-205ENST00000464480 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
HMGXB4-205ENST00000464480 S1PR4O95977 384 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 FBXO45P0C2W1 286 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 SEMA3FQ13275 785 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 UNC93B1Q9H1C4 597 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 GPSM3Q9Y4H4 160 aa6.95□□□□□ -1.3
HMGXB4-205ENST00000464480 PTK2Q05397 1052 aa6.94□□□□□ -1.3
HMGXB4-205ENST00000464480 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
HMGXB4-205ENST00000464480 FCF1Q9Y324 198 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-205ENST00000464480 NKX2-3Q8TAU0 364 aa6.93□□□□□ -1.3
HMGXB4-205ENST00000464480 ADAMTS19Q8TE59 1207 aa6.93□□□□□ -1.3
HMGXB4-205ENST00000464480 ALG2Q9H553 416 aa6.93□□□□□ -1.3
HMGXB4-205ENST00000464480 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-205ENST00000464480 ARHGAP9Q9BRR9 750 aa6.9□□□□□ -1.3
HMGXB4-205ENST00000464480 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-205ENST00000464480 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-205ENST00000464480 PPP1R15AO75807 674 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-205ENST00000464480 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-205ENST00000464480 SH3BP5LQ7L8J4 393 aa6.89□□□□□ -1.31
HMGXB4-205ENST00000464480 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
HMGXB4-205ENST00000464480 AGERQ15109 404 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 PPP1R18Q6NYC8 613 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
HMGXB4-205ENST00000464480 MAGEB6P1A0A0J9YX57 407 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 PALM3A6NDB9 673 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 ADAM32Q8TC27 787 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 BAP1Q92560 729 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
HMGXB4-205ENST00000464480 RNF223E7ERA6 249 aa6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 PPEF1O14829 653 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 SH3RF1Q7Z6J0 888 aa6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 OCSTAMPQ9BR26 566 aa6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 CARD14Q9BXL6 1004 aa6.86□□□□□ -1.31
HMGXB4-205ENST00000464480 ATP9BO43861 1147 aa6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 RFX1P22670 979 aa6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 TRIM32Q13049 653 aa6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 DZIP3Q86Y13 1208 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 TFIP11Q9UBB9 837 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 V9GY48 417 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-205ENST00000464480 ACIN1Q9UKV3 1341 aaKnown RBP6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 TBC1D9Q6ZT07 1266 aa6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 SLC10A4Q96EP9 437 aa6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 MAFBQ9Y5Q3 323 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-205ENST00000464480 SKIP12755 728 aa6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 ERFEQ4G0M1 354 aa6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 IRX2Q9BZI1 471 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 CEP126Q9P2H0 1117 aa6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 CDV3Q9UKY7 258 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-205ENST00000464480 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 PDIA4P13667 645 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 RPIAP49247 311 aa6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 WNT7BP56706 349 aa6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 SH3BP2P78314 561 aa6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
HMGXB4-205ENST00000464480 USP17L5A8MUK1 530 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 PDE4CQ08493 712 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 C1QTNF2Q9BXJ5 285 aa6.81□□□□□ -1.32
HMGXB4-205ENST00000464480 USP17L3A6NCW0 530 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms