RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 PAK3O75914 559 aaPredicted RBP21.08■□□□□ 0.97
ALMS1-202ENST00000464408 SEPT12Q8IYM1 358 aa21.07■□□□□ 0.96
ALMS1-202ENST00000464408 CCDC9Q9Y3X0 531 aaKnown RBP21.07■□□□□ 0.96
ALMS1-202ENST00000464408 PHRF1Q9P1Y6 1649 aaKnown RBP21.05■□□□□ 0.96
ALMS1-202ENST00000464408 BTG4Q9NY30 223 aa21.05■□□□□ 0.96
ALMS1-202ENST00000464408 SRCAPQ6ZRS2 3230 aa21.04■□□□□ 0.96
ALMS1-202ENST00000464408 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
ALMS1-202ENST00000464408 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
ALMS1-202ENST00000464408 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
ALMS1-202ENST00000464408 ACEP12821 1306 aa21.02■□□□□ 0.95
ALMS1-202ENST00000464408 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
ALMS1-202ENST00000464408 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
ALMS1-202ENST00000464408 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
ALMS1-202ENST00000464408 BLMP54132 1417 aaPredicted RBP20.99■□□□□ 0.95
ALMS1-202ENST00000464408 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
ALMS1-202ENST00000464408 TRPM1Q7Z4N2 1603 aa20.99■□□□□ 0.95
ALMS1-202ENST00000464408 NBPF8Q3BBV2 869 aa20.98■□□□□ 0.95
ALMS1-202ENST00000464408 CCDC125Q86Z20 511 aa20.98■□□□□ 0.95
ALMS1-202ENST00000464408 PRDM11Q9NQV5 511 aa20.98■□□□□ 0.95
ALMS1-202ENST00000464408 CCDC61Q9Y6R9 512 aa20.98■□□□□ 0.95
ALMS1-202ENST00000464408 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
ALMS1-202ENST00000464408 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 A0A0G2JS52 829 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 PLEKHG3A1L390 1219 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 MYT1Q01538 1121 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 KRT27Q7Z3Y8 459 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 DEFB132Q7Z7B7 95 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 CABP2Q9NPB3 220 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 NRKQ7Z2Y5 1582 aa20.97■□□□□ 0.95
ALMS1-202ENST00000464408 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
ALMS1-202ENST00000464408 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.95
ALMS1-202ENST00000464408 SRPK2P78362 688 aaKnown RBP20.95■□□□□ 0.94
ALMS1-202ENST00000464408 SPATA31A5Q5VU36 1347 aa20.95■□□□□ 0.94
ALMS1-202ENST00000464408 SPATA31A7Q8IWB4 1347 aa20.95■□□□□ 0.94
ALMS1-202ENST00000464408 ZC3H6P61129 1189 aaKnown RBP20.94■□□□□ 0.94
ALMS1-202ENST00000464408 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
ALMS1-202ENST00000464408 ZRANB1Q9UGI0 708 aa20.93■□□□□ 0.94
ALMS1-202ENST00000464408 FAM182BQ5T319 152 aa20.92■□□□□ 0.94
ALMS1-202ENST00000464408 ABTB2Q8N961 1025 aa20.9■□□□□ 0.94
ALMS1-202ENST00000464408 STRN4Q9NRL3 753 aa20.9■□□□□ 0.94
ALMS1-202ENST00000464408 LMO7Q8WWI1 1683 aa20.89■□□□□ 0.94
ALMS1-202ENST00000464408 USP19O94966 1318 aa20.89■□□□□ 0.93
ALMS1-202ENST00000464408 CAMTA1Q9Y6Y1 1673 aa20.89■□□□□ 0.93
ALMS1-202ENST00000464408 SPATA31A1Q5TZJ5 1347 aa20.88■□□□□ 0.93
ALMS1-202ENST00000464408 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
ALMS1-202ENST00000464408 ROCK2O75116 1388 aaKnown RBP20.86■□□□□ 0.93
ALMS1-202ENST00000464408 SF3B2Q13435 895 aaKnown RBP20.86■□□□□ 0.93
ALMS1-202ENST00000464408 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
ALMS1-202ENST00000464408 USP6P35125 1406 aa20.86■□□□□ 0.93
ALMS1-202ENST00000464408 SSH2Q76I76 1423 aa20.86■□□□□ 0.93
ALMS1-202ENST00000464408 TNS1Q9HBL0 1735 aaKnown RBP20.85■□□□□ 0.93
ALMS1-202ENST00000464408 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
ALMS1-202ENST00000464408 CPDO75976 1380 aa20.85■□□□□ 0.93
ALMS1-202ENST00000464408 USP35Q9P2H5 1018 aa20.84■□□□□ 0.93
ALMS1-202ENST00000464408 LARP1Q6PKG0 1096 aaKnown RBP20.83■□□□□ 0.93
ALMS1-202ENST00000464408 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
ALMS1-202ENST00000464408 GCP02774 474 aa20.82■□□□□ 0.92
ALMS1-202ENST00000464408 EVC2Q86UK5 1308 aa20.81■□□□□ 0.92
ALMS1-202ENST00000464408 NLRP13Q86W25 1043 aa20.81■□□□□ 0.92
ALMS1-202ENST00000464408 SLIT3O75094 1523 aa20.81■□□□□ 0.92
ALMS1-202ENST00000464408 EVA1CP58658 441 aa20.8■□□□□ 0.92
ALMS1-202ENST00000464408 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
ALMS1-202ENST00000464408 EN1Q05925 392 aaPredicted RBP20.79■□□□□ 0.92
ALMS1-202ENST00000464408 COL18A1P39060 1754 aa20.78■□□□□ 0.92
ALMS1-202ENST00000464408 COL5A2P05997 1499 aaPredicted RBP20.78■□□□□ 0.92
ALMS1-202ENST00000464408 BRD4O60885 1362 aaPredicted RBP20.78■□□□□ 0.92
ALMS1-202ENST00000464408 BAG6P46379 1132 aa20.78■□□□□ 0.92
ALMS1-202ENST00000464408 NLRP6P59044 892 aa20.78■□□□□ 0.92
ALMS1-202ENST00000464408 BARGINQ6ZT62 677 aa20.76■□□□□ 0.91
ALMS1-202ENST00000464408 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
ALMS1-202ENST00000464408 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
ALMS1-202ENST00000464408 TRIM37O94972 964 aa20.74■□□□□ 0.91
ALMS1-202ENST00000464408 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
ALMS1-202ENST00000464408 PARP4Q9UKK3 1724 aaKnown RBP20.74■□□□□ 0.91
ALMS1-202ENST00000464408 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
ALMS1-202ENST00000464408 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
ALMS1-202ENST00000464408 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
ALMS1-202ENST00000464408 CPSF1Q10570 1443 aaKnown RBP20.72■□□□□ 0.91
ALMS1-202ENST00000464408 AATKQ6ZMQ8 1374 aa20.72■□□□□ 0.91
ALMS1-202ENST00000464408 EZH2Q15910 746 aaKnown RBP20.71■□□□□ 0.91
ALMS1-202ENST00000464408 FAM196AQ6ZSG2 479 aa20.71■□□□□ 0.91
ALMS1-202ENST00000464408 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
ALMS1-202ENST00000464408 CRB1P82279 1406 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 SOX12O15370 315 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 LRRC37A3O60309 1634 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 LRP5O75197 1615 aa20.7■□□□□ 0.9
ALMS1-202ENST00000464408 KTN1Q86UP2 1357 aaKnown RBP20.69■□□□□ 0.9
ALMS1-202ENST00000464408 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
ALMS1-202ENST00000464408 NFAT5O94916 1531 aa20.68■□□□□ 0.9
ALMS1-202ENST00000464408 CAMKK2Q96RR4 588 aa20.68■□□□□ 0.9
ALMS1-202ENST00000464408 ZNF692Q9BU19 519 aaPredicted RBP20.68■□□□□ 0.9
ALMS1-202ENST00000464408 TONSLQ96HA7 1378 aa20.68■□□□□ 0.9
ALMS1-202ENST00000464408 SBNO2Q9Y2G9 1366 aa20.68■□□□□ 0.9
ALMS1-202ENST00000464408 RREB1Q92766 1687 aa20.67■□□□□ 0.9
ALMS1-202ENST00000464408 PEAK1Q9H792 1746 aa20.67■□□□□ 0.9
ALMS1-202ENST00000464408 THRAP3Q9Y2W1 955 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms