RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SHANK2Q9UPX8 1470 aa9.4□□□□□ -0.91
CLSTN1-204ENST00000464286 LAMC1P11047 1609 aa9.39□□□□□ -0.91
CLSTN1-204ENST00000464286 SMAPO00193 183 aa9.39□□□□□ -0.91
CLSTN1-204ENST00000464286 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
CLSTN1-204ENST00000464286 PZPP20742 1482 aa9.39□□□□□ -0.91
CLSTN1-204ENST00000464286 BCORL1Q5H9F3 1711 aa9.39□□□□□ -0.91
CLSTN1-204ENST00000464286 EIF3AQ14152 1382 aaKnown RBP9.38□□□□□ -0.91
CLSTN1-204ENST00000464286 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
CLSTN1-204ENST00000464286 URB2Q14146 1524 aaKnown RBP9.38□□□□□ -0.91
CLSTN1-204ENST00000464286 TATDN2Q93075 761 aa9.38□□□□□ -0.91
CLSTN1-204ENST00000464286 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
CLSTN1-204ENST00000464286 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-204ENST00000464286 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-204ENST00000464286 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
CLSTN1-204ENST00000464286 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
CLSTN1-204ENST00000464286 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
CLSTN1-204ENST00000464286 CAMSAP2Q08AD1 1489 aa9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 EIF2AK4Q9P2K8 1649 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 CARD11Q9BXL7 1154 aa9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 RSPH6AQ9H0K4 717 aa9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 PARD3Q8TEW0 1356 aa9.36□□□□□ -0.91
CLSTN1-204ENST00000464286 TARBP1Q13395 1621 aaKnown RBP9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 SEMA3EO15041 775 aa9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 LRCH3Q96II8 777 aa9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 CDK13Q14004 1512 aaKnown RBP9.35□□□□□ -0.91
CLSTN1-204ENST00000464286 KIAA0556O60303 1618 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 BLMP54132 1417 aaPredicted RBP9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 NUDT18Q6ZVK8 323 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 NGEFQ8N5V2 710 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 EXOC6Q8TAG9 804 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
CLSTN1-204ENST00000464286 CEP170Q5SW79 1584 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 ANKRD50Q9ULJ7 1429 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 KIAA0586Q9BVV6 1533 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 L1TD1Q5T7N2 865 aaKnown RBP9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 SAMD7Q7Z3H4 446 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
CLSTN1-204ENST00000464286 AAMPQ13685 434 aa9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 BECN1Q14457 450 aa9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 GLIPR1L2Q4G1C9 344 aa9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 NYAP1Q6ZVC0 841 aa9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 LAS1LQ9Y4W2 734 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 NINLQ9Y2I6 1382 aa9.32□□□□□ -0.92
CLSTN1-204ENST00000464286 CCDC144AA2RUR9 1427 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 PTGDRQ13258 359 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 UBE2Q2Q8WVN8 375 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 CLASP1Q7Z460 1538 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 NUP160Q12769 1436 aa9.31□□□□□ -0.92
CLSTN1-204ENST00000464286 NFKBIBQ15653 356 aa9.3□□□□□ -0.92
CLSTN1-204ENST00000464286 RSPH4AQ5TD94 716 aa9.3□□□□□ -0.92
CLSTN1-204ENST00000464286 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 VIRMAQ69YN4 1812 aaKnown RBP9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 ZMYM3Q14202 1370 aa9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 ZNF326Q5BKZ1 582 aaKnown RBP9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 TRPM1Q7Z4N2 1603 aa9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
CLSTN1-204ENST00000464286 GPRASP1Q5JY77 1395 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 TSPY4P0CV99 314 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 TSPY10P0CW01 314 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 PPP4CP60510 307 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 EYA1Q99502 592 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 PTPRGP23470 1445 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
CLSTN1-204ENST00000464286 NUP155O75694 1391 aa9.27□□□□□ -0.93
CLSTN1-204ENST00000464286 NUTM2FA1L443 756 aa9.27□□□□□ -0.93
CLSTN1-204ENST00000464286 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
CLSTN1-204ENST00000464286 SALL2Q9Y467 1007 aaPredicted RBP9.27□□□□□ -0.93
CLSTN1-204ENST00000464286 CARMIL2Q6F5E8 1435 aa9.27□□□□□ -0.93
CLSTN1-204ENST00000464286 C9orf84Q5VXU9 1444 aa9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 TMF1P82094 1093 aa9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 UPF2Q9HAU5 1272 aaKnown RBP9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 KDM2BQ8NHM5 1336 aa9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 PRDM15P57071 1507 aaPredicted RBP9.26□□□□□ -0.93
CLSTN1-204ENST00000464286 A0A0G2JS52 829 aa9.25□□□□□ -0.93
CLSTN1-204ENST00000464286 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLSTN1-204ENST00000464286 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
CLSTN1-204ENST00000464286 DISP1Q96F81 1524 aa9.25□□□□□ -0.93
CLSTN1-204ENST00000464286 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms