RNA–Protein interactions for RNA: ENST00000464243.1

CLHC1-210, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-210ENST00000464243 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
CLHC1-210ENST00000464243 GMPR2Q9P2T1 348 aaKnown RBP11.12□□□□□ -0.63
CLHC1-210ENST00000464243 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
CLHC1-210ENST00000464243 CTHP32929 405 aa11.11□□□□□ -0.63
CLHC1-210ENST00000464243 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
CLHC1-210ENST00000464243 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
CLHC1-210ENST00000464243 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
CLHC1-210ENST00000464243 NUTM2DQ5VT03 806 aaPredicted RBP11.09□□□□□ -0.63
CLHC1-210ENST00000464243 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
CLHC1-210ENST00000464243 RSPH6AQ9H0K4 717 aa11.09□□□□□ -0.63
CLHC1-210ENST00000464243 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
CLHC1-210ENST00000464243 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
CLHC1-210ENST00000464243 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
CLHC1-210ENST00000464243 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
CLHC1-210ENST00000464243 TSC1Q92574 1164 aa11.07□□□□□ -0.64
CLHC1-210ENST00000464243 C11orf95C9JLR9 678 aaPredicted RBP11.06□□□□□ -0.64
CLHC1-210ENST00000464243 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
CLHC1-210ENST00000464243 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
CLHC1-210ENST00000464243 TLL2Q9Y6L7 1015 aa11.06□□□□□ -0.64
CLHC1-210ENST00000464243 WASF2Q9Y6W5 498 aa11.05□□□□□ -0.64
CLHC1-210ENST00000464243 MPNDQ8N594 471 aa11.04□□□□□ -0.64
CLHC1-210ENST00000464243 FOXJ1Q92949 421 aa11.04□□□□□ -0.64
CLHC1-210ENST00000464243 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
CLHC1-210ENST00000464243 HELBQ8NG08 1087 aaPredicted RBP11.02□□□□□ -0.65
CLHC1-210ENST00000464243 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
CLHC1-210ENST00000464243 SNRPBP14678 240 aaKnown RBP11□□□□□ -0.65
CLHC1-210ENST00000464243 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
CLHC1-210ENST00000464243 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
CLHC1-210ENST00000464243 SH3D19Q5HYK7 790 aa11□□□□□ -0.65
CLHC1-210ENST00000464243 FBXO31Q5XUX0 539 aaPredicted RBP11□□□□□ -0.65
CLHC1-210ENST00000464243 FAM174AQ8TBP5 190 aa11□□□□□ -0.65
CLHC1-210ENST00000464243 TRIM47Q96LD4 638 aa11□□□□□ -0.65
CLHC1-210ENST00000464243 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
CLHC1-210ENST00000464243 SENP2Q9HC62 589 aa10.99□□□□□ -0.65
CLHC1-210ENST00000464243 CAPN5O15484 640 aaPredicted RBP10.98□□□□□ -0.65
CLHC1-210ENST00000464243 LCE2AQ5TA79 106 aaPredicted RBP10.98□□□□□ -0.65
CLHC1-210ENST00000464243 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
CLHC1-210ENST00000464243 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
CLHC1-210ENST00000464243 NNTQ13423 1086 aa10.97□□□□□ -0.65
CLHC1-210ENST00000464243 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
CLHC1-210ENST00000464243 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
CLHC1-210ENST00000464243 BMP1P13497 986 aa10.96□□□□□ -0.65
CLHC1-210ENST00000464243 TRIM46Q7Z4K8 759 aa10.96□□□□□ -0.65
CLHC1-210ENST00000464243 BPHLQ86WA6 291 aaPredicted RBP10.96□□□□□ -0.65
CLHC1-210ENST00000464243 ARMC2Q8NEN0 867 aa10.96□□□□□ -0.65
CLHC1-210ENST00000464243 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLHC1-210ENST00000464243 ADH1CP00326 375 aa10.95□□□□□ -0.66
CLHC1-210ENST00000464243 AGERQ15109 404 aa10.95□□□□□ -0.66
CLHC1-210ENST00000464243 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CLHC1-210ENST00000464243 SH3RF1Q7Z6J0 888 aa10.94□□□□□ -0.66
CLHC1-210ENST00000464243 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
CLHC1-210ENST00000464243 PPP2R2DQ66LE6 453 aa10.93□□□□□ -0.66
CLHC1-210ENST00000464243 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
CLHC1-210ENST00000464243 C1QTNF2Q9BXJ5 285 aa10.93□□□□□ -0.66
CLHC1-210ENST00000464243 KLF16Q9BXK1 252 aaPredicted RBP10.93□□□□□ -0.66
CLHC1-210ENST00000464243 TIMP2P16035 220 aa10.92□□□□□ -0.66
CLHC1-210ENST00000464243 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
CLHC1-210ENST00000464243 LRRN4Q8WUT4 740 aa10.92□□□□□ -0.66
CLHC1-210ENST00000464243 GRM5P41594 1212 aa10.91□□□□□ -0.66
CLHC1-210ENST00000464243 WDR4P57081 412 aaKnown RBP10.9□□□□□ -0.66
CLHC1-210ENST00000464243 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
CLHC1-210ENST00000464243 NR3C2P08235 984 aa10.89□□□□□ -0.67
CLHC1-210ENST00000464243 WFS1O76024 890 aa10.88□□□□□ -0.67
CLHC1-210ENST00000464243 NR5A1Q13285 461 aa10.88□□□□□ -0.67
CLHC1-210ENST00000464243 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CLHC1-210ENST00000464243 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
CLHC1-210ENST00000464243 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
CLHC1-210ENST00000464243 TRMT44Q8IYL2 757 aaKnown RBP10.87□□□□□ -0.67
CLHC1-210ENST00000464243 ZFP42Q96MM3 310 aa10.86□□□□□ -0.67
CLHC1-210ENST00000464243 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
CLHC1-210ENST00000464243 MAP4K5Q9Y4K4 846 aa10.86□□□□□ -0.67
CLHC1-210ENST00000464243 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
CLHC1-210ENST00000464243 AP1G2O75843 785 aa10.85□□□□□ -0.67
CLHC1-210ENST00000464243 NR6A1Q15406 480 aa10.85□□□□□ -0.67
CLHC1-210ENST00000464243 MRPL14Q6P1L8 145 aaKnown RBP10.85□□□□□ -0.67
CLHC1-210ENST00000464243 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
CLHC1-210ENST00000464243 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
CLHC1-210ENST00000464243 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
CLHC1-210ENST00000464243 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
CLHC1-210ENST00000464243 ERFEQ4G0M1 354 aa10.84□□□□□ -0.67
CLHC1-210ENST00000464243 LCE2CQ5TA81 110 aa10.84□□□□□ -0.67
CLHC1-210ENST00000464243 PDXDC2PQ6P474 469 aa10.84□□□□□ -0.67
CLHC1-210ENST00000464243 FSHRP23945 695 aa10.83□□□□□ -0.68
CLHC1-210ENST00000464243 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
CLHC1-210ENST00000464243 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
CLHC1-210ENST00000464243 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
CLHC1-210ENST00000464243 RFC5P40937 340 aa10.81□□□□□ -0.68
CLHC1-210ENST00000464243 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
CLHC1-210ENST00000464243 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
CLHC1-210ENST00000464243 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
CLHC1-210ENST00000464243 USP17L8P0C7I0 530 aa10.8□□□□□ -0.68
CLHC1-210ENST00000464243 SCARF1Q14162 830 aa10.8□□□□□ -0.68
CLHC1-210ENST00000464243 EPS8L1Q8TE68 723 aa10.8□□□□□ -0.68
CLHC1-210ENST00000464243 OCSTAMPQ9BR26 566 aa10.8□□□□□ -0.68
CLHC1-210ENST00000464243 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
CLHC1-210ENST00000464243 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
CLHC1-210ENST00000464243 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
CLHC1-210ENST00000464243 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
CLHC1-210ENST00000464243 WIPF1O43516 503 aa10.76□□□□□ -0.69
CLHC1-210ENST00000464243 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms