RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
CHKB-203ENST00000464225 FAM83GA6ND36 823 aa14.49□□□□□ -0.09
CHKB-203ENST00000464225 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
CHKB-203ENST00000464225 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
CHKB-203ENST00000464225 EP400Q96L91 3159 aa14.48□□□□□ -0.09
CHKB-203ENST00000464225 ACEP12821 1306 aa14.47□□□□□ -0.09
CHKB-203ENST00000464225 NRAPQ86VF7 1730 aa14.47□□□□□ -0.09
CHKB-203ENST00000464225 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
CHKB-203ENST00000464225 VPS72Q15906 364 aa14.47□□□□□ -0.09
CHKB-203ENST00000464225 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.09
CHKB-203ENST00000464225 COL14A1Q05707 1796 aaKnown RBP14.46□□□□□ -0.09
CHKB-203ENST00000464225 ROCK2O75116 1388 aaKnown RBP14.46□□□□□ -0.1
CHKB-203ENST00000464225 NBPF8Q3BBV2 869 aa14.45□□□□□ -0.1
CHKB-203ENST00000464225 PPIP5K1Q6PFW1 1433 aa14.45□□□□□ -0.1
CHKB-203ENST00000464225 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
CHKB-203ENST00000464225 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
CHKB-203ENST00000464225 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
CHKB-203ENST00000464225 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
CHKB-203ENST00000464225 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
CHKB-203ENST00000464225 BRWD3Q6RI45 1802 aa14.43□□□□□ -0.1
CHKB-203ENST00000464225 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
CHKB-203ENST00000464225 PRDM11Q9NQV5 511 aa14.42□□□□□ -0.1
CHKB-203ENST00000464225 KIAA0232Q92628 1395 aa14.42□□□□□ -0.1
CHKB-203ENST00000464225 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
CHKB-203ENST00000464225 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
CHKB-203ENST00000464225 EVC2Q86UK5 1308 aa14.4□□□□□ -0.1
CHKB-203ENST00000464225 TRIM26Q12899 539 aaPredicted RBP14.39□□□□□ -0.11
CHKB-203ENST00000464225 CHRNA2Q15822 529 aa14.39□□□□□ -0.11
CHKB-203ENST00000464225 ABTB2Q8N961 1025 aa14.39□□□□□ -0.11
CHKB-203ENST00000464225 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
CHKB-203ENST00000464225 USP6P35125 1406 aa14.39□□□□□ -0.11
CHKB-203ENST00000464225 USP19O94966 1318 aa14.39□□□□□ -0.11
CHKB-203ENST00000464225 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
CHKB-203ENST00000464225 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
CHKB-203ENST00000464225 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
CHKB-203ENST00000464225 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
CHKB-203ENST00000464225 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
CHKB-203ENST00000464225 CCDC125Q86Z20 511 aa14.37□□□□□ -0.11
CHKB-203ENST00000464225 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
CHKB-203ENST00000464225 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
CHKB-203ENST00000464225 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
CHKB-203ENST00000464225 A0A0G2JS52 829 aa14.36□□□□□ -0.11
CHKB-203ENST00000464225 MYT1Q01538 1121 aa14.36□□□□□ -0.11
CHKB-203ENST00000464225 KRT27Q7Z3Y8 459 aa14.36□□□□□ -0.11
CHKB-203ENST00000464225 CPDO75976 1380 aa14.35□□□□□ -0.11
CHKB-203ENST00000464225 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
CHKB-203ENST00000464225 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 LMO7Q8WWI1 1683 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 NLRP13Q86W25 1043 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 CARD11Q9BXL7 1154 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
CHKB-203ENST00000464225 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.11
CHKB-203ENST00000464225 GCP02774 474 aa14.33□□□□□ -0.12
CHKB-203ENST00000464225 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
CHKB-203ENST00000464225 SLIT3O75094 1523 aa14.32□□□□□ -0.12
CHKB-203ENST00000464225 NLRP6P59044 892 aa14.31□□□□□ -0.12
CHKB-203ENST00000464225 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
CHKB-203ENST00000464225 EVA1CP58658 441 aa14.3□□□□□ -0.12
CHKB-203ENST00000464225 DEFB132Q7Z7B7 95 aa14.3□□□□□ -0.12
CHKB-203ENST00000464225 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
CHKB-203ENST00000464225 FAM182BQ5T319 152 aa14.29□□□□□ -0.12
CHKB-203ENST00000464225 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
CHKB-203ENST00000464225 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
CHKB-203ENST00000464225 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
CHKB-203ENST00000464225 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
CHKB-203ENST00000464225 SF3B2Q13435 895 aaKnown RBP14.28□□□□□ -0.12
CHKB-203ENST00000464225 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
CHKB-203ENST00000464225 CD163L1Q9NR16 1453 aa14.27□□□□□ -0.12
CHKB-203ENST00000464225 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.12
CHKB-203ENST00000464225 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
CHKB-203ENST00000464225 TTC21AQ8NDW8 1320 aa14.27□□□□□ -0.12
CHKB-203ENST00000464225 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
CHKB-203ENST00000464225 BARGINQ6ZT62 677 aa14.27□□□□□ -0.13
CHKB-203ENST00000464225 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
CHKB-203ENST00000464225 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.13
CHKB-203ENST00000464225 COL18A1P39060 1754 aa14.25□□□□□ -0.13
CHKB-203ENST00000464225 TCP11L2Q8N4U5 519 aa14.25□□□□□ -0.13
CHKB-203ENST00000464225 NFAT5O94916 1531 aa14.25□□□□□ -0.13
CHKB-203ENST00000464225 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
CHKB-203ENST00000464225 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
CHKB-203ENST00000464225 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
CHKB-203ENST00000464225 CRB1P82279 1406 aa14.24□□□□□ -0.13
CHKB-203ENST00000464225 SOX12O15370 315 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 BAG6P46379 1132 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHKB-203ENST00000464225 KCNH5Q8NCM2 988 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 TESK2Q96S53 571 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 SLC12A5Q9H2X9 1139 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 AXIN2Q9Y2T1 843 aa14.23□□□□□ -0.13
CHKB-203ENST00000464225 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
CHKB-203ENST00000464225 ST20-MTHFSA0A0A6YYL1 179 aa14.22□□□□□ -0.13
CHKB-203ENST00000464225 USP54Q70EL1 1684 aa14.22□□□□□ -0.13
CHKB-203ENST00000464225 A0A1W2PP64 1363 aa14.22□□□□□ -0.13
CHKB-203ENST00000464225 USP31Q70CQ4 1352 aa14.22□□□□□ -0.13
CHKB-203ENST00000464225 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
CHKB-203ENST00000464225 FAM196AQ6ZSG2 479 aa14.21□□□□□ -0.13
CHKB-203ENST00000464225 NME9Q86XW9 330 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms