RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
ABCF3-204ENST00000463685 SSH2Q76I76 1423 aa20.5■□□□□ 0.87
ABCF3-204ENST00000463685 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
ABCF3-204ENST00000463685 ROBO1Q9Y6N7 1651 aa20.49■□□□□ 0.87
ABCF3-204ENST00000463685 PAK3O75914 559 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-204ENST00000463685 CGNL1Q0VF96 1302 aa20.49■□□□□ 0.87
ABCF3-204ENST00000463685 GGNBP2Q9H3C7 697 aa20.48■□□□□ 0.87
ABCF3-204ENST00000463685 FYB1O15117 783 aa20.47■□□□□ 0.87
ABCF3-204ENST00000463685 NPHP3Q7Z494 1330 aa20.47■□□□□ 0.87
ABCF3-204ENST00000463685 PXDNQ92626 1479 aa20.45■□□□□ 0.86
ABCF3-204ENST00000463685 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
ABCF3-204ENST00000463685 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
ABCF3-204ENST00000463685 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
ABCF3-204ENST00000463685 ANP32CO43423 234 aa20.44■□□□□ 0.86
ABCF3-204ENST00000463685 TTC21AQ8NDW8 1320 aa20.44■□□□□ 0.86
ABCF3-204ENST00000463685 NHSL1Q5SYE7 1610 aa20.43■□□□□ 0.86
ABCF3-204ENST00000463685 LMOD2Q6P5Q4 547 aa20.43■□□□□ 0.86
ABCF3-204ENST00000463685 MIER1Q8N108 512 aa20.43■□□□□ 0.86
ABCF3-204ENST00000463685 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
ABCF3-204ENST00000463685 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
ABCF3-204ENST00000463685 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
ABCF3-204ENST00000463685 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
ABCF3-204ENST00000463685 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
ABCF3-204ENST00000463685 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
ABCF3-204ENST00000463685 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
ABCF3-204ENST00000463685 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
ABCF3-204ENST00000463685 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
ABCF3-204ENST00000463685 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
ABCF3-204ENST00000463685 NSD2O96028 1365 aa20.4■□□□□ 0.86
ABCF3-204ENST00000463685 PARD3Q8TEW0 1356 aa20.39■□□□□ 0.85
ABCF3-204ENST00000463685 NLRP6P59044 892 aa20.39■□□□□ 0.85
ABCF3-204ENST00000463685 AHDC1Q5TGY3 1603 aaPredicted RBP20.38■□□□□ 0.85
ABCF3-204ENST00000463685 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
ABCF3-204ENST00000463685 COG3Q96JB2 828 aa20.38■□□□□ 0.85
ABCF3-204ENST00000463685 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
ABCF3-204ENST00000463685 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
ABCF3-204ENST00000463685 FBLN1P23142 703 aa20.37■□□□□ 0.85
ABCF3-204ENST00000463685 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
ABCF3-204ENST00000463685 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 SOX12O15370 315 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 RALBP1Q15311 655 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
ABCF3-204ENST00000463685 MARF1Q9Y4F3 1742 aaKnown RBP20.36■□□□□ 0.85
ABCF3-204ENST00000463685 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
ABCF3-204ENST00000463685 NLRP13Q86W25 1043 aa20.32■□□□□ 0.84
ABCF3-204ENST00000463685 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
ABCF3-204ENST00000463685 COL16A1Q07092 1604 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-204ENST00000463685 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
ABCF3-204ENST00000463685 ARHGEF10O15013 1369 aa20.31■□□□□ 0.84
ABCF3-204ENST00000463685 USP54Q70EL1 1684 aa20.3■□□□□ 0.84
ABCF3-204ENST00000463685 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
ABCF3-204ENST00000463685 USP19O94966 1318 aa20.29■□□□□ 0.84
ABCF3-204ENST00000463685 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
ABCF3-204ENST00000463685 LRRC59Q96AG4 307 aaKnown RBP20.29■□□□□ 0.84
ABCF3-204ENST00000463685 RRS1Q15050 365 aaKnown RBP20.28■□□□□ 0.84
ABCF3-204ENST00000463685 HSPA1LP34931 641 aa20.27■□□□□ 0.84
ABCF3-204ENST00000463685 SLIT3O75094 1523 aa20.27■□□□□ 0.83
ABCF3-204ENST00000463685 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
ABCF3-204ENST00000463685 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
ABCF3-204ENST00000463685 ZBTB7CA1YPR0 619 aa20.25■□□□□ 0.83
ABCF3-204ENST00000463685 GCP02774 474 aa20.25■□□□□ 0.83
ABCF3-204ENST00000463685 MTHFSP49914 203 aa20.25■□□□□ 0.83
ABCF3-204ENST00000463685 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
ABCF3-204ENST00000463685 NFAT5O94916 1531 aa20.25■□□□□ 0.83
ABCF3-204ENST00000463685 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
ABCF3-204ENST00000463685 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-204ENST00000463685 CRYBG1Q9Y4K1 1723 aa20.24■□□□□ 0.83
ABCF3-204ENST00000463685 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
ABCF3-204ENST00000463685 MAP3K19Q56UN5 1328 aa20.23■□□□□ 0.83
ABCF3-204ENST00000463685 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
ABCF3-204ENST00000463685 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
ABCF3-204ENST00000463685 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
ABCF3-204ENST00000463685 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
ABCF3-204ENST00000463685 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
ABCF3-204ENST00000463685 ABCA3Q99758 1704 aa20.2■□□□□ 0.82
ABCF3-204ENST00000463685 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-204ENST00000463685 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-204ENST00000463685 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
ABCF3-204ENST00000463685 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-204ENST00000463685 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
ABCF3-204ENST00000463685 ARHGEF25Q86VW2 580 aa20.18■□□□□ 0.82
ABCF3-204ENST00000463685 LTN1O94822 1766 aa20.17■□□□□ 0.82
ABCF3-204ENST00000463685 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-204ENST00000463685 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-204ENST00000463685 AMPHP49418 695 aa20.17■□□□□ 0.82
ABCF3-204ENST00000463685 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-204ENST00000463685 JCADQ9P266 1359 aa20.17■□□□□ 0.82
ABCF3-204ENST00000463685 CHRNA2Q15822 529 aa20.16■□□□□ 0.82
ABCF3-204ENST00000463685 KIAA0232Q92628 1395 aa20.16■□□□□ 0.82
ABCF3-204ENST00000463685 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
ABCF3-204ENST00000463685 SHPRHQ149N8 1683 aa20.15■□□□□ 0.82
ABCF3-204ENST00000463685 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-204ENST00000463685 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-204ENST00000463685 HOXC9P31274 260 aa20.14■□□□□ 0.81
ABCF3-204ENST00000463685 FBXO41Q8TF61 875 aa20.14■□□□□ 0.81
ABCF3-204ENST00000463685 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
ABCF3-204ENST00000463685 ADAMTS2O95450 1211 aa20.13■□□□□ 0.81
ABCF3-204ENST00000463685 CPDO75976 1380 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms