RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 CGNL1Q0VF96 1302 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 MKRN4PQ13434 485 aaPredicted RBP6.12□□□□□ -1.43
VPS72-203ENST00000463470 CNGB1Q14028 1251 aaPredicted RBP6.12□□□□□ -1.43
VPS72-203ENST00000463470 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 CENPQQ7L2Z9 268 aaPredicted RBP6.12□□□□□ -1.43
VPS72-203ENST00000463470 DDRGK1Q96HY6 314 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 PNNQ9H307 717 aaKnown RBP6.12□□□□□ -1.43
VPS72-203ENST00000463470 ADAMTS8Q9UP79 889 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 NRXN3Q9Y4C0 1643 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 ROBO1Q9Y6N7 1651 aa6.12□□□□□ -1.43
VPS72-203ENST00000463470 COL16A1Q07092 1604 aaPredicted RBP6.11□□□□□ -1.43
VPS72-203ENST00000463470 METP08581 1390 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 EVC2Q86UK5 1308 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 ZNF521Q96K83 1311 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
VPS72-203ENST00000463470 CFAP70Q5T0N1 1121 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
VPS72-203ENST00000463470 C19orf44Q9H6X5 657 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 NOP58Q9Y2X3 529 aaKnown RBP6.11□□□□□ -1.43
VPS72-203ENST00000463470 SRCAPQ6ZRS2 3230 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 CHD2O14647 1828 aaKnown RBP6.11□□□□□ -1.43
VPS72-203ENST00000463470 IFT172Q9UG01 1749 aa6.11□□□□□ -1.43
VPS72-203ENST00000463470 LRP6O75581 1613 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 AHDC1Q5TGY3 1603 aaPredicted RBP6.1□□□□□ -1.43
VPS72-203ENST00000463470 JCADQ9P266 1359 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 ECM2O94769 699 aaPredicted RBP6.1□□□□□ -1.43
VPS72-203ENST00000463470 SLFN5Q08AF3 891 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 CCDC27Q2M243 656 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 DUSP27Q5VZP5 1158 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 TRMT2AQ8IZ69 625 aaKnown RBP6.1□□□□□ -1.43
VPS72-203ENST00000463470 PROM2Q8N271 834 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 ZBTB47Q9UFB7 747 aaPredicted RBP6.1□□□□□ -1.43
VPS72-203ENST00000463470 AMOTL2Q9Y2J4 779 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 XRN1Q8IZH2 1706 aaKnown RBP6.1□□□□□ -1.43
VPS72-203ENST00000463470 USP32Q8NFA0 1604 aa6.1□□□□□ -1.43
VPS72-203ENST00000463470 MST1RQ04912 1400 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 SPATA31A6Q5VVP1 1343 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 ADGRF5Q8IZF2 1346 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 BRINP3Q76B58 766 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 CADPS2Q86UW7 1296 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 MORC1Q86VD1 984 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 WDR63Q8IWG1 891 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 EXOC6Q8TAG9 804 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 USP35Q9P2H5 1018 aa6.09□□□□□ -1.43
VPS72-203ENST00000463470 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
VPS72-203ENST00000463470 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 CHGAP10645 457 aaKnown RBP6.08□□□□□ -1.44
VPS72-203ENST00000463470 NUTM2DQ5VT03 806 aaPredicted RBP6.08□□□□□ -1.44
VPS72-203ENST00000463470 SPOCK2Q92563 424 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 MYH16Q9H6N6 1097 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 TERF2IPQ9NYB0 399 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 PPLO60437 1756 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 PTCH1Q13635 1447 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 ADGRL3Q9HAR2 1447 aa6.08□□□□□ -1.44
VPS72-203ENST00000463470 CFAP65Q6ZU64 1925 aaKnown RBP6.07□□□□□ -1.44
VPS72-203ENST00000463470 ANKRD36BQ8N2N9 1353 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 ADGRB1O14514 1584 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 PPM1GO15355 546 aaPredicted RBP6.07□□□□□ -1.44
VPS72-203ENST00000463470 PDE4AP27815 886 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 RTL5Q5HYW3 569 aaPredicted RBP6.07□□□□□ -1.44
VPS72-203ENST00000463470 SPRYD3Q8NCJ5 442 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 CDCA7LQ96GN5 454 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 BACH2Q9BYV9 841 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.07□□□□□ -1.44
VPS72-203ENST00000463470 MYOM1P52179 1685 aa6.07□□□□□ -1.44
VPS72-203ENST00000463470 MAPK8IP3Q9UPT6 1336 aa6.06□□□□□ -1.44
VPS72-203ENST00000463470 CHMP4BQ9H444 224 aaKnown RBP6.06□□□□□ -1.44
VPS72-203ENST00000463470 DAXXQ9UER7 740 aaPredicted RBP6.06□□□□□ -1.44
VPS72-203ENST00000463470 SALL2Q9Y467 1007 aaPredicted RBP6.06□□□□□ -1.44
VPS72-203ENST00000463470 MYO5BQ9ULV0 1848 aa6.06□□□□□ -1.44
VPS72-203ENST00000463470 ROBO2Q9HCK4 1378 aa6.06□□□□□ -1.44
VPS72-203ENST00000463470 PLEKHH1Q9ULM0 1364 aa6.06□□□□□ -1.44
VPS72-203ENST00000463470 APAF1O14727 1248 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 EIF5BO60841 1220 aaKnown RBP6.05□□□□□ -1.44
VPS72-203ENST00000463470 NEFMP07197 916 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 ATF3P18847 181 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 PMFBP1Q8TBY8 1022 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 CRBNQ96SW2 442 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 CARD14Q9BXL6 1004 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 TRAK1Q9UPV9 953 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 TECPR2O15040 1411 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 NSD3Q9BZ95 1437 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 ABCC11Q96J66 1382 aa6.05□□□□□ -1.44
VPS72-203ENST00000463470 SOS2Q07890 1332 aaPredicted RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 IL16Q14005 1332 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 KDM2BQ8NHM5 1336 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 C1orf167Q5SNV9 1468 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 CDK12Q9NYV4 1490 aaPredicted RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 CANXP27824 592 aaKnown RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 CALD1Q05682 793 aaKnown RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 FAM161AQ3B820 660 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 HDGFL2Q7Z4V5 671 aaPredicted RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 WWC1Q8IX03 1113 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 SETD1AO15047 1707 aaKnown RBP6.04□□□□□ -1.44
VPS72-203ENST00000463470 PNPLA6Q8IY17 1366 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 SHPRHQ149N8 1683 aa6.04□□□□□ -1.44
VPS72-203ENST00000463470 QRICH2Q9H0J4 1663 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms