RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
R3HDM1-213ENST00000463230 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
R3HDM1-213ENST00000463230 USP6P35125 1406 aa18.4■□□□□ 0.54
R3HDM1-213ENST00000463230 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
R3HDM1-213ENST00000463230 ST20-MTHFSA0A0A6YYL1 179 aa18.39■□□□□ 0.54
R3HDM1-213ENST00000463230 POTEAQ6S8J7 498 aa18.39■□□□□ 0.54
R3HDM1-213ENST00000463230 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.54
R3HDM1-213ENST00000463230 NGLY1Q96IV0 654 aa18.39■□□□□ 0.54
R3HDM1-213ENST00000463230 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.54
R3HDM1-213ENST00000463230 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.39■□□□□ 0.53
R3HDM1-213ENST00000463230 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
R3HDM1-213ENST00000463230 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
R3HDM1-213ENST00000463230 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
R3HDM1-213ENST00000463230 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
R3HDM1-213ENST00000463230 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
R3HDM1-213ENST00000463230 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
R3HDM1-213ENST00000463230 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
R3HDM1-213ENST00000463230 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
R3HDM1-213ENST00000463230 PHRF1Q9P1Y6 1649 aaKnown RBP18.36■□□□□ 0.53
R3HDM1-213ENST00000463230 SLIT2O94813 1529 aa18.35■□□□□ 0.53
R3HDM1-213ENST00000463230 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
R3HDM1-213ENST00000463230 TMF1P82094 1093 aa18.34■□□□□ 0.53
R3HDM1-213ENST00000463230 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
R3HDM1-213ENST00000463230 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
R3HDM1-213ENST00000463230 USP21Q9UK80 565 aa18.34■□□□□ 0.53
R3HDM1-213ENST00000463230 ATRNO75882 1429 aa18.33■□□□□ 0.53
R3HDM1-213ENST00000463230 USP19O94966 1318 aa18.33■□□□□ 0.53
R3HDM1-213ENST00000463230 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.53
R3HDM1-213ENST00000463230 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.53
R3HDM1-213ENST00000463230 SOCS7O14512 581 aa18.33■□□□□ 0.53
R3HDM1-213ENST00000463230 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
R3HDM1-213ENST00000463230 TRPC5Q9UL62 973 aaPredicted RBP18.33■□□□□ 0.52
R3HDM1-213ENST00000463230 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
R3HDM1-213ENST00000463230 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
R3HDM1-213ENST00000463230 BCL9LQ86UU0 1499 aa18.32■□□□□ 0.52
R3HDM1-213ENST00000463230 RXRBP28702 533 aa18.31■□□□□ 0.52
R3HDM1-213ENST00000463230 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
R3HDM1-213ENST00000463230 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
R3HDM1-213ENST00000463230 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
R3HDM1-213ENST00000463230 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
R3HDM1-213ENST00000463230 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
R3HDM1-213ENST00000463230 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
R3HDM1-213ENST00000463230 PIK3C2AO00443 1686 aa18.3■□□□□ 0.52
R3HDM1-213ENST00000463230 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
R3HDM1-213ENST00000463230 SLIT3O75094 1523 aa18.29■□□□□ 0.52
R3HDM1-213ENST00000463230 UNC5CLQ8IV45 518 aa18.29■□□□□ 0.52
R3HDM1-213ENST00000463230 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
R3HDM1-213ENST00000463230 CPDO75976 1380 aa18.28■□□□□ 0.52
R3HDM1-213ENST00000463230 EDC4Q6P2E9 1401 aaKnown RBP18.28■□□□□ 0.52
R3HDM1-213ENST00000463230 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.521e-6■■□□□ 14.4
R3HDM1-213ENST00000463230 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
R3HDM1-213ENST00000463230 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
R3HDM1-213ENST00000463230 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
R3HDM1-213ENST00000463230 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
R3HDM1-213ENST00000463230 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
R3HDM1-213ENST00000463230 A0A1W2PP64 1363 aa18.25■□□□□ 0.51
R3HDM1-213ENST00000463230 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
R3HDM1-213ENST00000463230 NLRP6P59044 892 aa18.25■□□□□ 0.51
R3HDM1-213ENST00000463230 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
R3HDM1-213ENST00000463230 VPS72Q15906 364 aa18.24■□□□□ 0.51
R3HDM1-213ENST00000463230 KIAA0232Q92628 1395 aa18.24■□□□□ 0.51
R3HDM1-213ENST00000463230 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
R3HDM1-213ENST00000463230 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
R3HDM1-213ENST00000463230 GCP02774 474 aa18.22■□□□□ 0.51
R3HDM1-213ENST00000463230 KCNH5Q8NCM2 988 aa18.22■□□□□ 0.51
R3HDM1-213ENST00000463230 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
R3HDM1-213ENST00000463230 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
R3HDM1-213ENST00000463230 RGS12O14924 1447 aa18.21■□□□□ 0.51
R3HDM1-213ENST00000463230 ABCC6O95255 1503 aa18.21■□□□□ 0.51
R3HDM1-213ENST00000463230 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.5
R3HDM1-213ENST00000463230 GLI3P10071 1580 aa18.2■□□□□ 0.5
R3HDM1-213ENST00000463230 MYOM1P52179 1685 aa18.2■□□□□ 0.5
R3HDM1-213ENST00000463230 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
R3HDM1-213ENST00000463230 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
R3HDM1-213ENST00000463230 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
R3HDM1-213ENST00000463230 NFAT5O94916 1531 aa18.18■□□□□ 0.5
R3HDM1-213ENST00000463230 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
R3HDM1-213ENST00000463230 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
R3HDM1-213ENST00000463230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.55e-7■■■■□ 20.1
R3HDM1-213ENST00000463230 COL18A1P39060 1754 aa18.15■□□□□ 0.5
R3HDM1-213ENST00000463230 CAMTA1Q9Y6Y1 1673 aa18.15■□□□□ 0.5
R3HDM1-213ENST00000463230 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
R3HDM1-213ENST00000463230 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
R3HDM1-213ENST00000463230 NME9Q86XW9 330 aa18.14■□□□□ 0.49
R3HDM1-213ENST00000463230 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
R3HDM1-213ENST00000463230 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
R3HDM1-213ENST00000463230 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.49
R3HDM1-213ENST00000463230 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
R3HDM1-213ENST00000463230 KIF20BQ96Q89 1820 aa18.12■□□□□ 0.49
R3HDM1-213ENST00000463230 COL5A2P05997 1499 aaPredicted RBP18.12■□□□□ 0.49
R3HDM1-213ENST00000463230 EVA1CP58658 441 aa18.11■□□□□ 0.49
R3HDM1-213ENST00000463230 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
R3HDM1-213ENST00000463230 COG3Q96JB2 828 aa18.1■□□□□ 0.49
R3HDM1-213ENST00000463230 THSD7AQ9UPZ6 1657 aa18.1■□□□□ 0.49
R3HDM1-213ENST00000463230 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
R3HDM1-213ENST00000463230 LTN1O94822 1766 aa18.09■□□□□ 0.49
R3HDM1-213ENST00000463230 THRAP3Q9Y2W1 955 aaKnown RBP18.08■□□□□ 0.49
R3HDM1-213ENST00000463230 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
R3HDM1-213ENST00000463230 CRB1P82279 1406 aa18.08■□□□□ 0.48
R3HDM1-213ENST00000463230 BARGINQ6ZT62 677 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms