RNA–Protein interactions for RNA: ENST00000463224.5

SFR1-203, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

TSL 3

Gene SFR1, Length 496 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-203ENST00000463224 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
SFR1-203ENST00000463224 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
SFR1-203ENST00000463224 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
SFR1-203ENST00000463224 ZNF787Q6DD87 383 aa12.65□□□□□ -0.38
SFR1-203ENST00000463224 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
SFR1-203ENST00000463224 CTHP32929 405 aa12.64□□□□□ -0.39
SFR1-203ENST00000463224 SIAH2O43255 324 aa12.63□□□□□ -0.39
SFR1-203ENST00000463224 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
SFR1-203ENST00000463224 TSC1Q92574 1164 aa12.63□□□□□ -0.39
SFR1-203ENST00000463224 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
SFR1-203ENST00000463224 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
SFR1-203ENST00000463224 SKIV2LQ15477 1246 aaKnown RBP12.6□□□□□ -0.39
SFR1-203ENST00000463224 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
SFR1-203ENST00000463224 HPS1Q92902 700 aa12.6□□□□□ -0.39
SFR1-203ENST00000463224 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
SFR1-203ENST00000463224 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
SFR1-203ENST00000463224 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
SFR1-203ENST00000463224 AXIN1O15169 862 aa12.57□□□□□ -0.4
SFR1-203ENST00000463224 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
SFR1-203ENST00000463224 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.56□□□□□ -0.4
SFR1-203ENST00000463224 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
SFR1-203ENST00000463224 FOXJ1Q92949 421 aa12.55□□□□□ -0.4
SFR1-203ENST00000463224 CTC1Q2NKJ3 1217 aa12.54□□□□□ -0.4
SFR1-203ENST00000463224 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
SFR1-203ENST00000463224 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
SFR1-203ENST00000463224 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
SFR1-203ENST00000463224 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
SFR1-203ENST00000463224 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
SFR1-203ENST00000463224 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
SFR1-203ENST00000463224 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
SFR1-203ENST00000463224 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
SFR1-203ENST00000463224 PPP2R2DQ66LE6 453 aa12.49□□□□□ -0.41
SFR1-203ENST00000463224 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
SFR1-203ENST00000463224 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
SFR1-203ENST00000463224 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
SFR1-203ENST00000463224 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
SFR1-203ENST00000463224 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
SFR1-203ENST00000463224 ATP13A2Q9NQ11 1180 aa12.46□□□□□ -0.41
SFR1-203ENST00000463224 AGERQ15109 404 aa12.43□□□□□ -0.42
SFR1-203ENST00000463224 MPNDQ8N594 471 aa12.43□□□□□ -0.42
SFR1-203ENST00000463224 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
SFR1-203ENST00000463224 AP1G2O75843 785 aa12.42□□□□□ -0.42
SFR1-203ENST00000463224 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
SFR1-203ENST00000463224 NR6A1Q15406 480 aa12.41□□□□□ -0.42
SFR1-203ENST00000463224 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
SFR1-203ENST00000463224 BPHLQ86WA6 291 aaPredicted RBP12.41□□□□□ -0.42
SFR1-203ENST00000463224 ARMC2Q8NEN0 867 aa12.41□□□□□ -0.42
SFR1-203ENST00000463224 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
SFR1-203ENST00000463224 NNTQ13423 1086 aa12.4□□□□□ -0.42
SFR1-203ENST00000463224 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
SFR1-203ENST00000463224 SNRPBP14678 240 aaKnown RBP12.39□□□□□ -0.43
SFR1-203ENST00000463224 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
SFR1-203ENST00000463224 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
SFR1-203ENST00000463224 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
SFR1-203ENST00000463224 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
SFR1-203ENST00000463224 HMX1Q9NP08 348 aaPredicted RBP12.39□□□□□ -0.43
SFR1-203ENST00000463224 CAPN5O15484 640 aaPredicted RBP12.38□□□□□ -0.43
SFR1-203ENST00000463224 BMP1P13497 986 aa12.38□□□□□ -0.43
SFR1-203ENST00000463224 RFC5P40937 340 aa12.38□□□□□ -0.43
SFR1-203ENST00000463224 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
SFR1-203ENST00000463224 ADH1CP00326 375 aa12.37□□□□□ -0.43
SFR1-203ENST00000463224 GRM5P41594 1212 aa12.37□□□□□ -0.43
SFR1-203ENST00000463224 TRIM46Q7Z4K8 759 aa12.37□□□□□ -0.43
SFR1-203ENST00000463224 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
SFR1-203ENST00000463224 NR3C2P08235 984 aa12.36□□□□□ -0.43
SFR1-203ENST00000463224 KLF16Q9BXK1 252 aaPredicted RBP12.36□□□□□ -0.43
SFR1-203ENST00000463224 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
SFR1-203ENST00000463224 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
SFR1-203ENST00000463224 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
SFR1-203ENST00000463224 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
SFR1-203ENST00000463224 TIMP2P16035 220 aa12.34□□□□□ -0.43
SFR1-203ENST00000463224 TRIM47Q96LD4 638 aa12.34□□□□□ -0.43
SFR1-203ENST00000463224 OCSTAMPQ9BR26 566 aa12.33□□□□□ -0.44
SFR1-203ENST00000463224 WDR4P57081 412 aaKnown RBP12.32□□□□□ -0.44
SFR1-203ENST00000463224 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
SFR1-203ENST00000463224 ERFEQ4G0M1 354 aa12.31□□□□□ -0.44
SFR1-203ENST00000463224 PDXDC2PQ6P474 469 aa12.31□□□□□ -0.44
SFR1-203ENST00000463224 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
SFR1-203ENST00000463224 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
SFR1-203ENST00000463224 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
SFR1-203ENST00000463224 NR5A1Q13285 461 aa12.29□□□□□ -0.44
SFR1-203ENST00000463224 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
SFR1-203ENST00000463224 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
SFR1-203ENST00000463224 FSHRP23945 695 aa12.28□□□□□ -0.44
SFR1-203ENST00000463224 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
SFR1-203ENST00000463224 TRIM34Q9BYJ4 488 aa12.28□□□□□ -0.44
SFR1-203ENST00000463224 LCE2AQ5TA79 106 aaPredicted RBP12.27□□□□□ -0.45
SFR1-203ENST00000463224 VASH1Q7L8A9 365 aaPredicted RBP12.27□□□□□ -0.45
SFR1-203ENST00000463224 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.45
SFR1-203ENST00000463224 ZIC2O95409 532 aaPredicted RBP12.26□□□□□ -0.45
SFR1-203ENST00000463224 ZFP42Q96MM3 310 aa12.26□□□□□ -0.45
SFR1-203ENST00000463224 TMEM259Q4ZIN3 620 aa12.25□□□□□ -0.45
SFR1-203ENST00000463224 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
SFR1-203ENST00000463224 ZC3H4Q9UPT8 1303 aaKnown RBP12.25□□□□□ -0.45
SFR1-203ENST00000463224 TREML4Q6UXN2 200 aa12.24□□□□□ -0.45
SFR1-203ENST00000463224 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
SFR1-203ENST00000463224 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
SFR1-203ENST00000463224 ADAM32Q8TC27 787 aa12.22□□□□□ -0.45
SFR1-203ENST00000463224 PURBQ96QR8 312 aaKnown RBP12.22□□□□□ -0.45
SFR1-203ENST00000463224 PTK2Q05397 1052 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms