RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
VRK2-208ENST00000463222 NR6A1Q15406 480 aa8.11□□□□□ -1.11
VRK2-208ENST00000463222 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
VRK2-208ENST00000463222 CCDC9Q9Y3X0 531 aaKnown RBP8.11□□□□□ -1.11
VRK2-208ENST00000463222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.1□□□□□ -1.11
VRK2-208ENST00000463222 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
VRK2-208ENST00000463222 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
VRK2-208ENST00000463222 RANGAP1P46060 587 aaPredicted RBP8.09□□□□□ -1.11
VRK2-208ENST00000463222 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
VRK2-208ENST00000463222 ALG2Q9H553 416 aa8.09□□□□□ -1.11
VRK2-208ENST00000463222 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
VRK2-208ENST00000463222 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
VRK2-208ENST00000463222 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
VRK2-208ENST00000463222 SLC27A5Q9Y2P5 690 aa8.07□□□□□ -1.12
VRK2-208ENST00000463222 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
VRK2-208ENST00000463222 SRPK2P78362 688 aaKnown RBP8.06□□□□□ -1.12
VRK2-208ENST00000463222 CDCA8Q53HL2 280 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 MORN1Q5T089 497 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 BLOC1S3Q6QNY0 202 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 TRIM67Q6ZTA4 783 aa8.06□□□□□ -1.12
VRK2-208ENST00000463222 GZF1Q9H116 711 aaPredicted RBP8.06□□□□□ -1.12
VRK2-208ENST00000463222 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
VRK2-208ENST00000463222 PALM3A6NDB9 673 aaPredicted RBP8.05□□□□□ -1.12
VRK2-208ENST00000463222 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
VRK2-208ENST00000463222 RETREG3Q86VR2 466 aa8.05□□□□□ -1.12
VRK2-208ENST00000463222 ANKLE1Q8NAG6 615 aa8.05□□□□□ -1.12
VRK2-208ENST00000463222 SLC19A1P41440 591 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 PRR20EP86478 221 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 PRR20CP86479 221 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 PRR20DP86480 221 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 PRR20BP86481 221 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 PRR20AP86496 221 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 EMID1Q96A84 441 aaPredicted RBP8.04□□□□□ -1.12
VRK2-208ENST00000463222 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
VRK2-208ENST00000463222 TLL1O43897 1013 aa8.03□□□□□ -1.12
VRK2-208ENST00000463222 RNF19BQ6ZMZ0 732 aa8.03□□□□□ -1.12
VRK2-208ENST00000463222 CSB-PGBD3P0DP91 1061 aa8.02□□□□□ -1.13
VRK2-208ENST00000463222 PDE4CQ08493 712 aa8.02□□□□□ -1.13
VRK2-208ENST00000463222 Q3C1V9 767 aa8.02□□□□□ -1.13
VRK2-208ENST00000463222 SPRYD7Q5W111 196 aa8.02□□□□□ -1.13
VRK2-208ENST00000463222 ZNF598Q86UK7 904 aaKnown RBP8.02□□□□□ -1.13
VRK2-208ENST00000463222 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
VRK2-208ENST00000463222 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
VRK2-208ENST00000463222 PNMA1Q8ND90 353 aa8.01□□□□□ -1.13
VRK2-208ENST00000463222 DGAT1O75907 488 aa8□□□□□ -1.13
VRK2-208ENST00000463222 SOX11P35716 441 aa8□□□□□ -1.13
VRK2-208ENST00000463222 DESI1Q6ICB0 168 aa8□□□□□ -1.13
VRK2-208ENST00000463222 S1PR4O95977 384 aa7.99□□□□□ -1.13
VRK2-208ENST00000463222 ADH1BP00325 375 aa7.99□□□□□ -1.13
VRK2-208ENST00000463222 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
VRK2-208ENST00000463222 PKDCCQ504Y2 493 aa7.99□□□□□ -1.13
VRK2-208ENST00000463222 BRICD5Q6PL45 260 aa7.99□□□□□ -1.13
VRK2-208ENST00000463222 USB1Q9BQ65 265 aaKnown RBP7.99□□□□□ -1.13
VRK2-208ENST00000463222 NR1I2O75469 434 aa7.98□□□□□ -1.13
VRK2-208ENST00000463222 NR1H3Q13133 447 aa7.98□□□□□ -1.13
VRK2-208ENST00000463222 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
VRK2-208ENST00000463222 FBXO45P0C2W1 286 aa7.97□□□□□ -1.13
VRK2-208ENST00000463222 MYT1Q01538 1121 aa7.97□□□□□ -1.13
VRK2-208ENST00000463222 TMCO4Q5TGY1 634 aa7.97□□□□□ -1.13
VRK2-208ENST00000463222 SCUBE3Q8IX30 993 aa7.97□□□□□ -1.13
VRK2-208ENST00000463222 ZNF775Q96BV0 537 aaPredicted RBP7.97□□□□□ -1.13
VRK2-208ENST00000463222 USTQ9Y2C2 406 aa7.97□□□□□ -1.13
VRK2-208ENST00000463222 ZNF697Q5TEC3 545 aa7.96□□□□□ -1.14
VRK2-208ENST00000463222 LIAT1Q6ZQX7 453 aa7.96□□□□□ -1.14
VRK2-208ENST00000463222 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
VRK2-208ENST00000463222 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
VRK2-208ENST00000463222 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 ATP9BO43861 1147 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 GDF9O60383 454 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 FMNL1O95466 1100 aaPredicted RBP7.95□□□□□ -1.14
VRK2-208ENST00000463222 BRD1O95696 1058 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 CTHP32929 405 aa7.95□□□□□ -1.14
VRK2-208ENST00000463222 PPEF1O14829 653 aaPredicted RBP7.94□□□□□ -1.14
VRK2-208ENST00000463222 ATG7O95352 703 aa7.94□□□□□ -1.14
VRK2-208ENST00000463222 MFAP1P55081 439 aaKnown RBP7.94□□□□□ -1.14
VRK2-208ENST00000463222 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
VRK2-208ENST00000463222 SLC6A16Q9GZN6 736 aa7.94□□□□□ -1.14
VRK2-208ENST00000463222 VRTNQ9H8Y1 702 aa7.94□□□□□ -1.14
VRK2-208ENST00000463222 MTMR7Q9Y216 660 aa7.94□□□□□ -1.14
VRK2-208ENST00000463222 F12P00748 615 aaPredicted RBP7.93□□□□□ -1.14
VRK2-208ENST00000463222 JUNDP17535 347 aa7.93□□□□□ -1.14
VRK2-208ENST00000463222 SALL2Q9Y467 1007 aaPredicted RBP7.93□□□□□ -1.14
VRK2-208ENST00000463222 TMEM88BA6NKF7 163 aa7.92□□□□□ -1.14
VRK2-208ENST00000463222 KCNA1Q09470 495 aa7.92□□□□□ -1.14
VRK2-208ENST00000463222 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
VRK2-208ENST00000463222 FAM187AA6NFU0 413 aa7.91□□□□□ -1.14
VRK2-208ENST00000463222 SKIP12755 728 aa7.91□□□□□ -1.14
VRK2-208ENST00000463222 PLA2G2CQ5R387 149 aa7.91□□□□□ -1.14
VRK2-208ENST00000463222 KANK4Q5T7N3 995 aaPredicted RBP7.91□□□□□ -1.14
VRK2-208ENST00000463222 PATL2C9JE40 543 aaKnown RBP7.9□□□□□ -1.14
VRK2-208ENST00000463222 TNFRSF10AO00220 468 aa7.9□□□□□ -1.14
VRK2-208ENST00000463222 PTPRNQ16849 979 aa7.9□□□□□ -1.14
VRK2-208ENST00000463222 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
VRK2-208ENST00000463222 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
VRK2-208ENST00000463222 FAM160A2Q8N612 972 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms