RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 BTG4Q9NY30 223 aa34.85■■■■□ 3.17
TTC3-212ENST00000463216 ATP7BP35670 1465 aa34.84■■■■□ 3.17
TTC3-212ENST00000463216 KIAA1210Q9ULL0 1709 aa34.83■■■■□ 3.17
TTC3-212ENST00000463216 COL14A1Q05707 1796 aaKnown RBP34.78■■■■□ 3.16
TTC3-212ENST00000463216 NUTM2GQ5VZR2 741 aa34.77■■■■□ 3.16
TTC3-212ENST00000463216 ZRANB1Q9UGI0 708 aa34.77■■■■□ 3.16
TTC3-212ENST00000463216 FAM98CQ17RN3 349 aaKnown RBP34.76■■■■□ 3.16
TTC3-212ENST00000463216 KRT27Q7Z3Y8 459 aa34.76■■■■□ 3.16
TTC3-212ENST00000463216 PRDM11Q9NQV5 511 aa34.76■■■■□ 3.16
TTC3-212ENST00000463216 NRAPQ86VF7 1730 aa34.75■■■■□ 3.15
TTC3-212ENST00000463216 ONECUT3O60422 494 aaPredicted RBP34.74■■■■□ 3.15
TTC3-212ENST00000463216 SF3B2Q13435 895 aaKnown RBP34.74■■■■□ 3.15
TTC3-212ENST00000463216 CCDC61Q9Y6R9 512 aa34.74■■■■□ 3.15
TTC3-212ENST00000463216 ACEP12821 1306 aa34.74■■■■□ 3.15
TTC3-212ENST00000463216 BLMP54132 1417 aaPredicted RBP34.73■■■■□ 3.15
TTC3-212ENST00000463216 CRYBG1Q9Y4K1 1723 aa34.72■■■■□ 3.15
TTC3-212ENST00000463216 SRPK2P78362 688 aaKnown RBP34.72■■■■□ 3.15
TTC3-212ENST00000463216 NBPF8Q3BBV2 869 aa34.71■■■■□ 3.15
TTC3-212ENST00000463216 CENPJQ9HC77 1338 aaPredicted RBP34.7■■■■□ 3.15
TTC3-212ENST00000463216 TOPAZ1Q8N9V7 1692 aa34.7■■■■□ 3.14
TTC3-212ENST00000463216 CHRNA2Q15822 529 aa34.69■■■■□ 3.14
TTC3-212ENST00000463216 DEFB132Q7Z7B7 95 aa34.69■■■■□ 3.14
TTC3-212ENST00000463216 ZC3H6P61129 1189 aaKnown RBP34.68■■■■□ 3.14
TTC3-212ENST00000463216 POLR3AO14802 1390 aaPredicted RBP34.67■■■■□ 3.14
TTC3-212ENST00000463216 KIAA0232Q92628 1395 aa34.67■■■■□ 3.14
TTC3-212ENST00000463216 L3MBTL2Q969R5 705 aa34.67■■■■□ 3.14
TTC3-212ENST00000463216 NEUROD1Q13562 356 aa34.66■■■■□ 3.14
TTC3-212ENST00000463216 SIN3AQ96ST3 1273 aa34.66■■■■□ 3.14
TTC3-212ENST00000463216 CABP2Q9NPB3 220 aa34.66■■■■□ 3.14
TTC3-212ENST00000463216 PLEKHG3A1L390 1219 aa34.65■■■■□ 3.14
TTC3-212ENST00000463216 STRN4Q9NRL3 753 aa34.65■■■■□ 3.14
TTC3-212ENST00000463216 PHRF1Q9P1Y6 1649 aaKnown RBP34.65■■■■□ 3.14
TTC3-212ENST00000463216 SPATA31A5Q5VU36 1347 aa34.64■■■■□ 3.14
TTC3-212ENST00000463216 SPATA31A7Q8IWB4 1347 aa34.64■■■■□ 3.14
TTC3-212ENST00000463216 ABTB2Q8N961 1025 aa34.64■■■■□ 3.14
TTC3-212ENST00000463216 PPIP5K1Q6PFW1 1433 aa34.62■■■■□ 3.13
TTC3-212ENST00000463216 QRICH2Q9H0J4 1663 aa34.61■■■■□ 3.13
TTC3-212ENST00000463216 FAM182BQ5T319 152 aa34.59■■■■□ 3.13
TTC3-212ENST00000463216 EVA1CP58658 441 aa34.56■■■■□ 3.12
TTC3-212ENST00000463216 USP35Q9P2H5 1018 aa34.55■■■■□ 3.12
TTC3-212ENST00000463216 SRCAPQ6ZRS2 3230 aa34.55■■■■□ 3.12
TTC3-212ENST00000463216 SPATA31A1Q5TZJ5 1347 aa34.53■■■■□ 3.12
TTC3-212ENST00000463216 NLRP13Q86W25 1043 aa34.52■■■■□ 3.12
TTC3-212ENST00000463216 CABP1Q9NZU7 370 aa34.52■■■■□ 3.12
TTC3-212ENST00000463216 BAG6P46379 1132 aa34.51■■■■□ 3.12
TTC3-212ENST00000463216 NRKQ7Z2Y5 1582 aa34.5■■■■□ 3.11
TTC3-212ENST00000463216 TRPM1Q7Z4N2 1603 aa34.5■■■■□ 3.11
TTC3-212ENST00000463216 ROCK2O75116 1388 aaKnown RBP34.49■■■■□ 3.11
TTC3-212ENST00000463216 ZBTB7CA1YPR0 619 aa34.49■■■■□ 3.11
TTC3-212ENST00000463216 EVC2Q86UK5 1308 aa34.48■■■■□ 3.11
TTC3-212ENST00000463216 THSD7AQ9UPZ6 1657 aa34.47■■■■□ 3.11
TTC3-212ENST00000463216 USP19O94966 1318 aa34.46■■■■□ 3.11
TTC3-212ENST00000463216 GCP02774 474 aa34.45■■■■□ 3.11
TTC3-212ENST00000463216 SSH2Q76I76 1423 aa34.44■■■■□ 3.1
TTC3-212ENST00000463216 NLRP6P59044 892 aa34.43■■■■□ 3.1
TTC3-212ENST00000463216 LARP1Q6PKG0 1096 aaKnown RBP34.43■■■■□ 3.1
TTC3-212ENST00000463216 CAMTA1Q9Y6Y1 1673 aa34.43■■■■□ 3.1
TTC3-212ENST00000463216 EN1Q05925 392 aaPredicted RBP34.42■■■■□ 3.1
TTC3-212ENST00000463216 RGPD1P0DJD0 1748 aa34.41■■■■□ 3.1
TTC3-212ENST00000463216 USP6P35125 1406 aa34.41■■■■□ 3.1
TTC3-212ENST00000463216 CPDO75976 1380 aa34.41■■■■□ 3.1
TTC3-212ENST00000463216 BRD4O60885 1362 aaPredicted RBP34.39■■■■□ 3.1
TTC3-212ENST00000463216 PSDA5PKW4 1024 aaPredicted RBP34.37■■■■□ 3.09
TTC3-212ENST00000463216 LMO7Q8WWI1 1683 aa34.36■■■■□ 3.09
TTC3-212ENST00000463216 PDE3BQ13370 1112 aa34.36■■■■□ 3.09
TTC3-212ENST00000463216 TCP11L2Q8N4U5 519 aa34.36■■■■□ 3.09
TTC3-212ENST00000463216 TRIM37O94972 964 aa34.35■■■■□ 3.09
TTC3-212ENST00000463216 FAM196AQ6ZSG2 479 aa34.35■■■■□ 3.09
TTC3-212ENST00000463216 BARGINQ6ZT62 677 aa34.35■■■■□ 3.09
TTC3-212ENST00000463216 TNS1Q9HBL0 1735 aaKnown RBP34.3■■■■□ 3.08
TTC3-212ENST00000463216 COL5A2P05997 1499 aaPredicted RBP34.3■■■■□ 3.08
TTC3-212ENST00000463216 PIK3C2AO00443 1686 aa34.29■■■■□ 3.08
TTC3-212ENST00000463216 SOX12O15370 315 aa34.29■■■■□ 3.08
TTC3-212ENST00000463216 EZH2Q15910 746 aaKnown RBP34.28■■■■□ 3.08
TTC3-212ENST00000463216 ZNF692Q9BU19 519 aaPredicted RBP34.28■■■■□ 3.08
TTC3-212ENST00000463216 CARD11Q9BXL7 1154 aa34.27■■■■□ 3.08
TTC3-212ENST00000463216 THRAP3Q9Y2W1 955 aaKnown RBP34.27■■■■□ 3.08
TTC3-212ENST00000463216 SLIT3O75094 1523 aa34.26■■■■□ 3.08
TTC3-212ENST00000463216 APBA3O96018 575 aa34.26■■■■□ 3.08
TTC3-212ENST00000463216 TTC21BQ7Z4L5 1316 aa34.26■■■■□ 3.07
TTC3-212ENST00000463216 AKAP12Q02952 1782 aa34.24■■■■□ 3.07
TTC3-212ENST00000463216 AATKQ6ZMQ8 1374 aa34.23■■■■□ 3.07
TTC3-212ENST00000463216 CRB1P82279 1406 aa34.23■■■■□ 3.07
TTC3-212ENST00000463216 TOM1L2Q6ZVM7 507 aa34.23■■■■□ 3.07
TTC3-212ENST00000463216 TONSLQ96HA7 1378 aa34.23■■■■□ 3.07
TTC3-212ENST00000463216 DISP2A7MBM2 1401 aa34.22■■■■□ 3.07
TTC3-212ENST00000463216 KTN1Q86UP2 1357 aaKnown RBP34.22■■■■□ 3.07
TTC3-212ENST00000463216 R3HDM1Q15032 1099 aaKnown RBP34.21■■■■□ 3.07
TTC3-212ENST00000463216 KCNH5Q8NCM2 988 aa34.19■■■■□ 3.06
TTC3-212ENST00000463216 CAMKK2Q96RR4 588 aa34.18■■■■□ 3.06
TTC3-212ENST00000463216 AXIN2Q9Y2T1 843 aa34.18■■■■□ 3.06
TTC3-212ENST00000463216 TTC21AQ8NDW8 1320 aa34.18■■■■□ 3.06
TTC3-212ENST00000463216 TMC1Q8TDI8 760 aa34.17■■■■□ 3.06
TTC3-212ENST00000463216 PARP4Q9UKK3 1724 aaKnown RBP34.16■■■■□ 3.06
TTC3-212ENST00000463216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.16■■■■□ 3.067e-7■■■■■ 27.2
TTC3-212ENST00000463216 CPSF1Q10570 1443 aaKnown RBP34.15■■■■□ 3.06
TTC3-212ENST00000463216 CSB-PGBD3P0DP91 1061 aa34.15■■■■□ 3.06
TTC3-212ENST00000463216 COL18A1P39060 1754 aa34.15■■■■□ 3.06
TTC3-212ENST00000463216 ARHGEF25Q86VW2 580 aa34.14■■■■□ 3.06
TTC3-212ENST00000463216 RGPD5Q99666 1765 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms