RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
CCR9-205ENST00000463197 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
CCR9-205ENST00000463197 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
CCR9-205ENST00000463197 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
CCR9-205ENST00000463197 CCDC9Q9Y3X0 531 aaKnown RBP8.3□□□□□ -1.08
CCR9-205ENST00000463197 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 POLR3AO14802 1390 aaPredicted RBP8.29□□□□□ -1.08
CCR9-205ENST00000463197 KIAA0232Q92628 1395 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 ALS2Q96Q42 1657 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
CCR9-205ENST00000463197 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.29□□□□□ -1.08
CCR9-205ENST00000463197 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
CCR9-205ENST00000463197 GPRASP1Q5JY77 1395 aa8.28□□□□□ -1.08
CCR9-205ENST00000463197 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
CCR9-205ENST00000463197 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
CCR9-205ENST00000463197 BRWD3Q6RI45 1802 aa8.27□□□□□ -1.09
CCR9-205ENST00000463197 NRAPQ86VF7 1730 aa8.27□□□□□ -1.09
CCR9-205ENST00000463197 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
CCR9-205ENST00000463197 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
CCR9-205ENST00000463197 CABP1Q9NZU7 370 aa8.27□□□□□ -1.09
CCR9-205ENST00000463197 PLCH1Q4KWH8 1693 aa8.27□□□□□ -1.09
CCR9-205ENST00000463197 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
CCR9-205ENST00000463197 CRYBG1Q9Y4K1 1723 aa8.26□□□□□ -1.09
CCR9-205ENST00000463197 PRDM11Q9NQV5 511 aa8.26□□□□□ -1.09
CCR9-205ENST00000463197 CAMTA1Q9Y6Y1 1673 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
CCR9-205ENST00000463197 GCP02774 474 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 STRN4Q9NRL3 753 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 USP19O94966 1318 aa8.25□□□□□ -1.09
CCR9-205ENST00000463197 EIF3AQ14152 1382 aaKnown RBP8.24□□□□□ -1.09
CCR9-205ENST00000463197 NWD2Q9ULI1 1742 aa8.24□□□□□ -1.09
CCR9-205ENST00000463197 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
CCR9-205ENST00000463197 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
CCR9-205ENST00000463197 EZH2Q15910 746 aaKnown RBP8.24□□□□□ -1.09
CCR9-205ENST00000463197 CAMKK2Q96RR4 588 aa8.24□□□□□ -1.09
CCR9-205ENST00000463197 CENPJQ9HC77 1338 aaPredicted RBP8.24□□□□□ -1.09
CCR9-205ENST00000463197 COL14A1Q05707 1796 aaKnown RBP8.23□□□□□ -1.09
CCR9-205ENST00000463197 PPIP5K1Q6PFW1 1433 aa8.23□□□□□ -1.09
CCR9-205ENST00000463197 A0A0G2JS52 829 aa8.23□□□□□ -1.09
CCR9-205ENST00000463197 TRIM37O94972 964 aa8.23□□□□□ -1.09
CCR9-205ENST00000463197 MYT1Q01538 1121 aa8.23□□□□□ -1.09
CCR9-205ENST00000463197 PTF1AQ7RTS3 328 aa8.23□□□□□ -1.09
CCR9-205ENST00000463197 THSD7AQ9UPZ6 1657 aa8.22□□□□□ -1.09
CCR9-205ENST00000463197 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
CCR9-205ENST00000463197 CPDO75976 1380 aa8.22□□□□□ -1.09
CCR9-205ENST00000463197 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.09
CCR9-205ENST00000463197 EVA1CP58658 441 aa8.21□□□□□ -1.1
CCR9-205ENST00000463197 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 BAG6P46379 1132 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 NLRP6P59044 892 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 SF3B2Q13435 895 aaKnown RBP8.2□□□□□ -1.1
CCR9-205ENST00000463197 R3HDM1Q15032 1099 aaKnown RBP8.2□□□□□ -1.1
CCR9-205ENST00000463197 NLRP13Q86W25 1043 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 TCP11L2Q8N4U5 519 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
CCR9-205ENST00000463197 LMO7Q8WWI1 1683 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 USP6P35125 1406 aa8.2□□□□□ -1.1
CCR9-205ENST00000463197 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
CCR9-205ENST00000463197 ARHGEF25Q86VW2 580 aa8.19□□□□□ -1.1
CCR9-205ENST00000463197 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
CCR9-205ENST00000463197 DISP2A7MBM2 1401 aa8.19□□□□□ -1.1
CCR9-205ENST00000463197 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
CCR9-205ENST00000463197 ZBTB7CA1YPR0 619 aa8.18□□□□□ -1.1
CCR9-205ENST00000463197 APBA3O96018 575 aa8.18□□□□□ -1.1
CCR9-205ENST00000463197 PROM2Q8N271 834 aa8.18□□□□□ -1.1
CCR9-205ENST00000463197 CPSF1Q10570 1443 aaKnown RBP8.18□□□□□ -1.1
CCR9-205ENST00000463197 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
CCR9-205ENST00000463197 SLC12A5Q9H2X9 1139 aa8.17□□□□□ -1.1
CCR9-205ENST00000463197 EVC2Q86UK5 1308 aa8.17□□□□□ -1.1
CCR9-205ENST00000463197 AATKQ6ZMQ8 1374 aa8.17□□□□□ -1.1
CCR9-205ENST00000463197 CD163L1Q9NR16 1453 aa8.17□□□□□ -1.1
CCR9-205ENST00000463197 SLIT3O75094 1523 aa8.17□□□□□ -1.1
CCR9-205ENST00000463197 SOX12O15370 315 aa8.16□□□□□ -1.1
CCR9-205ENST00000463197 ROCK2O75116 1388 aaKnown RBP8.16□□□□□ -1.1
CCR9-205ENST00000463197 PDE3BQ13370 1112 aa8.16□□□□□ -1.1
CCR9-205ENST00000463197 TRPM1Q7Z4N2 1603 aa8.16□□□□□ -1.1
CCR9-205ENST00000463197 PDGFDQ9GZP0 370 aaPredicted RBP8.16□□□□□ -1.1
CCR9-205ENST00000463197 THRAP3Q9Y2W1 955 aaKnown RBP8.16□□□□□ -1.1
CCR9-205ENST00000463197 COL18A1P39060 1754 aa8.15□□□□□ -1.1
CCR9-205ENST00000463197 ITSN1Q15811 1721 aa8.15□□□□□ -1.1
CCR9-205ENST00000463197 TNS1Q9HBL0 1735 aaKnown RBP8.15□□□□□ -1.1
CCR9-205ENST00000463197 SBNO2Q9Y2G9 1366 aa8.15□□□□□ -1.1
CCR9-205ENST00000463197 FBLN1P23142 703 aa8.15□□□□□ -1.1
CCR9-205ENST00000463197 NME9Q86XW9 330 aa8.15□□□□□ -1.1
CCR9-205ENST00000463197 ZNF692Q9BU19 519 aaPredicted RBP8.15□□□□□ -1.1
CCR9-205ENST00000463197 UTRNP46939 3433 aa8.15□□□□□ -1.11
CCR9-205ENST00000463197 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
CCR9-205ENST00000463197 QRICH2Q9H0J4 1663 aa8.14□□□□□ -1.11
CCR9-205ENST00000463197 CRB1P82279 1406 aa8.14□□□□□ -1.11
CCR9-205ENST00000463197 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
CCR9-205ENST00000463197 WDR17Q8IZU2 1322 aa8.14□□□□□ -1.11
CCR9-205ENST00000463197 TOM1L2Q6ZVM7 507 aa8.14□□□□□ -1.11
CCR9-205ENST00000463197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms