RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
COL6A1-202ENST00000463060 NSD2O96028 1365 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 PXDNQ92626 1479 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 MIER1Q8N108 512 aa19.59■□□□□ 0.73
COL6A1-202ENST00000463060 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 SOS2Q07890 1332 aaPredicted RBP19.58■□□□□ 0.73
COL6A1-202ENST00000463060 ANP32CO43423 234 aa19.58■□□□□ 0.72
COL6A1-202ENST00000463060 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
COL6A1-202ENST00000463060 NME9Q86XW9 330 aa19.58■□□□□ 0.72
COL6A1-202ENST00000463060 USP31Q70CQ4 1352 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 RALBP1Q15311 655 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 NHSL1Q5SYE7 1610 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
COL6A1-202ENST00000463060 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
COL6A1-202ENST00000463060 GGNBP2Q9H3C7 697 aa19.56■□□□□ 0.72
COL6A1-202ENST00000463060 KIF20BQ96Q89 1820 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 UBAP1LF5GYI3 381 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 ANKRD26Q9UPS8 1709 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 USP54Q70EL1 1684 aa19.53■□□□□ 0.72
COL6A1-202ENST00000463060 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
COL6A1-202ENST00000463060 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 SPATA31A3Q5VYP0 1347 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 ABTB2Q8N961 1025 aa19.51■□□□□ 0.71
COL6A1-202ENST00000463060 COG3Q96JB2 828 aa19.5■□□□□ 0.71
COL6A1-202ENST00000463060 NLRP6P59044 892 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 TNS3Q68CZ2 1445 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
COL6A1-202ENST00000463060 PPP2R1AP30153 589 aa19.48■□□□□ 0.71
COL6A1-202ENST00000463060 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
COL6A1-202ENST00000463060 USP19O94966 1318 aa19.47■□□□□ 0.71
COL6A1-202ENST00000463060 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
COL6A1-202ENST00000463060 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
COL6A1-202ENST00000463060 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
COL6A1-202ENST00000463060 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 FBLN1P23142 703 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
COL6A1-202ENST00000463060 SLIT3O75094 1523 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
COL6A1-202ENST00000463060 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
COL6A1-202ENST00000463060 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
COL6A1-202ENST00000463060 SOCS7O14512 581 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 NFAT5O94916 1531 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 GCP02774 474 aa19.4■□□□□ 0.7
COL6A1-202ENST00000463060 MTHFSP49914 203 aa19.4■□□□□ 0.7
COL6A1-202ENST00000463060 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
COL6A1-202ENST00000463060 MAP2P11137 1827 aaKnown RBP19.39■□□□□ 0.7
COL6A1-202ENST00000463060 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 INSRP06213 1382 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 MAP3K19Q56UN5 1328 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 RRS1Q15050 365 aaKnown RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
COL6A1-202ENST00000463060 KIF24Q5T7B8 1368 aa19.33■□□□□ 0.69
COL6A1-202ENST00000463060 SOX12O15370 315 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 PEAK1Q9H792 1746 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
COL6A1-202ENST00000463060 CPDO75976 1380 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 ABCA3Q99758 1704 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 HSPA1LP34931 641 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
COL6A1-202ENST00000463060 CDK12Q9NYV4 1490 aaPredicted RBP19.32■□□□□ 0.68
COL6A1-202ENST00000463060 IP6K1Q92551 441 aa19.3■□□□□ 0.68
COL6A1-202ENST00000463060 SHPRHQ149N8 1683 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 JCADQ9P266 1359 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 LTN1O94822 1766 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 COL18A1P39060 1754 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 HOXC9P31274 260 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
COL6A1-202ENST00000463060 HSP90AB2PQ58FF8 381 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 FLT4P35916 1363 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
COL6A1-202ENST00000463060 CFAP53Q96M91 514 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms