RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 TERF2IPQ9NYB0 399 aa28.13■■■□□ 2.09
NUP43-205ENST00000463048 MYOM1P52179 1685 aa28.13■■■□□ 2.09
NUP43-205ENST00000463048 A0A1W2PP64 1363 aa28.12■■■□□ 2.09
NUP43-205ENST00000463048 CPSF1Q10570 1443 aaKnown RBP28.12■■■□□ 2.09
NUP43-205ENST00000463048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
NUP43-205ENST00000463048 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
NUP43-205ENST00000463048 KIF7Q2M1P5 1343 aa28.11■■■□□ 2.09
NUP43-205ENST00000463048 CABLES1Q8TDN4 633 aa28.1■■■□□ 2.09
NUP43-205ENST00000463048 NINLQ9Y2I6 1382 aa28.1■■■□□ 2.09
NUP43-205ENST00000463048 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
NUP43-205ENST00000463048 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
NUP43-205ENST00000463048 ABTB2Q8N961 1025 aa28.08■■■□□ 2.09
NUP43-205ENST00000463048 TTC21BQ7Z4L5 1316 aa28.07■■■□□ 2.08
NUP43-205ENST00000463048 ARHGEF10O15013 1369 aa28.07■■■□□ 2.08
NUP43-205ENST00000463048 HAP1P54257 671 aaPredicted RBP28.06■■■□□ 2.08
NUP43-205ENST00000463048 SPATA31A6Q5VVP1 1343 aa28.06■■■□□ 2.08
NUP43-205ENST00000463048 ADAMTS2O95450 1211 aa28.05■■■□□ 2.08
NUP43-205ENST00000463048 ANKRD36BQ8N2N9 1353 aa28.05■■■□□ 2.08
NUP43-205ENST00000463048 LRP6O75581 1613 aa28.04■■■□□ 2.08
NUP43-205ENST00000463048 COL22A1Q8NFW1 1626 aaPredicted RBP28.04■■■□□ 2.08
NUP43-205ENST00000463048 NRKQ7Z2Y5 1582 aa28.04■■■□□ 2.08
NUP43-205ENST00000463048 MEX3CQ5U5Q3 659 aaKnown RBP28.04■■■□□ 2.08
NUP43-205ENST00000463048 SSH2Q76I76 1423 aa28.03■■■□□ 2.08
NUP43-205ENST00000463048 CCDC7Q96M83 1385 aa28.03■■■□□ 2.08
NUP43-205ENST00000463048 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
NUP43-205ENST00000463048 MED1Q15648 1581 aaPredicted RBP28.02■■■□□ 2.08
NUP43-205ENST00000463048 NME9Q86XW9 330 aa28.01■■■□□ 2.07
NUP43-205ENST00000463048 ZRANB1Q9UGI0 708 aa28.01■■■□□ 2.07
NUP43-205ENST00000463048 EDC4Q6P2E9 1401 aaKnown RBP28.01■■■□□ 2.07
NUP43-205ENST00000463048 PIK3C2AO00443 1686 aa28■■■□□ 2.07
NUP43-205ENST00000463048 NLRP6P59044 892 aa28■■■□□ 2.07
NUP43-205ENST00000463048 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
NUP43-205ENST00000463048 PANK3Q9H999 370 aa27.99■■■□□ 2.07
NUP43-205ENST00000463048 TTC21AQ8NDW8 1320 aa27.98■■■□□ 2.07
NUP43-205ENST00000463048 CARD14Q9BXL6 1004 aa27.98■■■□□ 2.07
NUP43-205ENST00000463048 ABCA3Q99758 1704 aa27.98■■■□□ 2.07
NUP43-205ENST00000463048 NSD3Q9BZ95 1437 aa27.97■■■□□ 2.07
NUP43-205ENST00000463048 SOX12O15370 315 aa27.96■■■□□ 2.07
NUP43-205ENST00000463048 NLRP13Q86W25 1043 aa27.96■■■□□ 2.07
NUP43-205ENST00000463048 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
NUP43-205ENST00000463048 PHRF1Q9P1Y6 1649 aaKnown RBP27.93■■■□□ 2.06
NUP43-205ENST00000463048 CRYBG1Q9Y4K1 1723 aa27.93■■■□□ 2.06
NUP43-205ENST00000463048 ZBTB7CA1YPR0 619 aa27.92■■■□□ 2.06
NUP43-205ENST00000463048 PHF23Q9BUL5 403 aaPredicted RBP27.91■■■□□ 2.06
NUP43-205ENST00000463048 ZC3H6P61129 1189 aaKnown RBP27.9■■■□□ 2.06
NUP43-205ENST00000463048 GGNBP2Q9H3C7 697 aa27.9■■■□□ 2.06
NUP43-205ENST00000463048 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
NUP43-205ENST00000463048 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.05
NUP43-205ENST00000463048 USP19O94966 1318 aa27.89■■■□□ 2.05
NUP43-205ENST00000463048 KIF20BQ96Q89 1820 aa27.87■■■□□ 2.05
NUP43-205ENST00000463048 FYB1O15117 783 aa27.86■■■□□ 2.05
NUP43-205ENST00000463048 GCP02774 474 aa27.86■■■□□ 2.05
NUP43-205ENST00000463048 CNGB1Q14028 1251 aaPredicted RBP27.85■■■□□ 2.05
NUP43-205ENST00000463048 COG3Q96JB2 828 aa27.85■■■□□ 2.05
NUP43-205ENST00000463048 CHRNA2Q15822 529 aa27.84■■■□□ 2.05
NUP43-205ENST00000463048 USP31Q70CQ4 1352 aa27.84■■■□□ 2.05
NUP43-205ENST00000463048 SLIT3O75094 1523 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 KNSTRNQ9Y448 316 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 AFF2P51816 1311 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 CGNL1Q0VF96 1302 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 KIAA0232Q92628 1395 aa27.83■■■□□ 2.05
NUP43-205ENST00000463048 OVOS2A0A0J9YW53 1432 aa27.82■■■□□ 2.04
NUP43-205ENST00000463048 OVOS2Q6IE36 1432 aa27.82■■■□□ 2.04
NUP43-205ENST00000463048 FAM83GA6ND36 823 aa27.81■■■□□ 2.04
NUP43-205ENST00000463048 FBLN1P23142 703 aa27.8■■■□□ 2.04
NUP43-205ENST00000463048 USP54Q70EL1 1684 aa27.78■■■□□ 2.04
NUP43-205ENST00000463048 KCNH5Q8NCM2 988 aa27.78■■■□□ 2.04
NUP43-205ENST00000463048 PLCH1Q4KWH8 1693 aa27.77■■■□□ 2.04
NUP43-205ENST00000463048 DDX10Q13206 875 aaKnown RBP27.76■■■□□ 2.03
NUP43-205ENST00000463048 RGS17Q9UGC6 210 aaPredicted RBP27.76■■■□□ 2.03
NUP43-205ENST00000463048 USP21Q9UK80 565 aa27.76■■■□□ 2.03
NUP43-205ENST00000463048 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
NUP43-205ENST00000463048 TNNT2P45379 298 aaPredicted RBP27.75■■■□□ 2.03
NUP43-205ENST00000463048 NFAT5O94916 1531 aa27.75■■■□□ 2.03
NUP43-205ENST00000463048 COL14A1Q05707 1796 aaKnown RBP27.74■■■□□ 2.03
NUP43-205ENST00000463048 BTG4Q9NY30 223 aa27.74■■■□□ 2.03
NUP43-205ENST00000463048 CC2D1BQ5T0F9 858 aaKnown RBP27.73■■■□□ 2.03
NUP43-205ENST00000463048 PER1O15534 1290 aaPredicted RBP27.72■■■□□ 2.03
NUP43-205ENST00000463048 FNBP4Q8N3X1 1017 aaPredicted RBP27.72■■■□□ 2.03
NUP43-205ENST00000463048 CPDO75976 1380 aa27.72■■■□□ 2.03
NUP43-205ENST00000463048 RRS1Q15050 365 aaKnown RBP27.7■■■□□ 2.02
NUP43-205ENST00000463048 ZNF772Q68DY9 489 aaPredicted RBP27.7■■■□□ 2.02
NUP43-205ENST00000463048 ARHGEF25Q86VW2 580 aa27.7■■■□□ 2.02
NUP43-205ENST00000463048 STRN4Q9NRL3 753 aa27.7■■■□□ 2.02
NUP43-205ENST00000463048 SLIT2O94813 1529 aa27.7■■■□□ 2.02
NUP43-205ENST00000463048 LTN1O94822 1766 aa27.7■■■□□ 2.02
NUP43-205ENST00000463048 ANKRD26Q9UPS8 1709 aa27.7■■■□□ 2.02
NUP43-205ENST00000463048 AMER1Q5JTC6 1135 aaPredicted RBP27.69■■■□□ 2.02
NUP43-205ENST00000463048 MORC1Q86VD1 984 aa27.69■■■□□ 2.02
NUP43-205ENST00000463048 POTEAQ6S8J7 498 aa27.68■■■□□ 2.02
NUP43-205ENST00000463048 BCL9LQ86UU0 1499 aa27.68■■■□□ 2.02
NUP43-205ENST00000463048 UNC5CLQ8IV45 518 aa27.67■■■□□ 2.02
NUP43-205ENST00000463048 QTRT2Q9H974 415 aaKnown RBP27.67■■■□□ 2.02
NUP43-205ENST00000463048 CCDC9Q9Y3X0 531 aaKnown RBP27.67■■■□□ 2.02
NUP43-205ENST00000463048 CAMTA1Q9Y6Y1 1673 aa27.65■■■□□ 2.02
NUP43-205ENST00000463048 NSD2O96028 1365 aa27.65■■■□□ 2.02
NUP43-205ENST00000463048 NWD2Q9ULI1 1742 aa27.65■■■□□ 2.02
NUP43-205ENST00000463048 EVA1CP58658 441 aa27.65■■■□□ 2.02
NUP43-205ENST00000463048 AXIN2Q9Y2T1 843 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms