RNA–Protein interactions for RNA: ENST00000462892.1

SEMA4A-209, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-209ENST00000462892 ABCA3Q99758 1704 aa35.81■■■■□ 3.32
SEMA4A-209ENST00000462892 TRPC5Q9UL62 973 aaPredicted RBP35.81■■■■□ 3.32
SEMA4A-209ENST00000462892 CDK12Q9NYV4 1490 aaPredicted RBP35.79■■■■□ 3.32
SEMA4A-209ENST00000462892 CABP1Q9NZU7 370 aa35.78■■■■□ 3.32
SEMA4A-209ENST00000462892 CLSPNQ9HAW4 1339 aa35.78■■■■□ 3.32
SEMA4A-209ENST00000462892 ATRNO75882 1429 aa35.77■■■■□ 3.32
SEMA4A-209ENST00000462892 SLIT2O94813 1529 aa35.76■■■■□ 3.31
SEMA4A-209ENST00000462892 SBNO2Q9Y2G9 1366 aa35.74■■■■□ 3.31
SEMA4A-209ENST00000462892 UNC5CLQ8IV45 518 aa35.72■■■■□ 3.31
SEMA4A-209ENST00000462892 RGS12O14924 1447 aa35.71■■■■□ 3.31
SEMA4A-209ENST00000462892 FAM83GA6ND36 823 aa35.7■■■■□ 3.31
SEMA4A-209ENST00000462892 NUTM2GQ5VZR2 741 aa35.7■■■■□ 3.31
SEMA4A-209ENST00000462892 CRYBG1Q9Y4K1 1723 aa35.69■■■■□ 3.3
SEMA4A-209ENST00000462892 TIMELESSQ9UNS1 1208 aa35.68■■■■□ 3.3
SEMA4A-209ENST00000462892 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.67■■■■□ 3.3
SEMA4A-209ENST00000462892 ABTB2Q8N961 1025 aa35.66■■■■□ 3.3
SEMA4A-209ENST00000462892 ATAD2Q6PL18 1390 aa35.65■■■■□ 3.3
SEMA4A-209ENST00000462892 GJD4Q96KN9 370 aaPredicted RBP35.65■■■■□ 3.3
SEMA4A-209ENST00000462892 PLCH1Q4KWH8 1693 aa35.65■■■■□ 3.3
SEMA4A-209ENST00000462892 USP6P35125 1406 aa35.65■■■■□ 3.3
SEMA4A-209ENST00000462892 BRD4O60885 1362 aaPredicted RBP35.64■■■■□ 3.3
SEMA4A-209ENST00000462892 CCER1Q8TC90 406 aaPredicted RBP35.62■■■■□ 3.29
SEMA4A-209ENST00000462892 NWD2Q9ULI1 1742 aa35.61■■■■□ 3.29
SEMA4A-209ENST00000462892 ST20-MTHFSA0A0A6YYL1 179 aa35.6■■■■□ 3.29
SEMA4A-209ENST00000462892 PHRF1Q9P1Y6 1649 aaKnown RBP35.59■■■■□ 3.29
SEMA4A-209ENST00000462892 SSH2Q76I76 1423 aa35.57■■■■□ 3.29
SEMA4A-209ENST00000462892 COL14A1Q05707 1796 aaKnown RBP35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 VPS72Q15906 364 aa35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 TESK2Q96S53 571 aa35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 ZNF692Q9BU19 519 aaPredicted RBP35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 PRDM11Q9NQV5 511 aa35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 BTG4Q9NY30 223 aa35.57■■■■□ 3.28
SEMA4A-209ENST00000462892 KIAA0232Q92628 1395 aa35.56■■■■□ 3.28
SEMA4A-209ENST00000462892 NLRP13Q86W25 1043 aa35.56■■■■□ 3.28
SEMA4A-209ENST00000462892 USP19O94966 1318 aa35.56■■■■□ 3.28
SEMA4A-209ENST00000462892 GLI3P10071 1580 aa35.55■■■■□ 3.28
SEMA4A-209ENST00000462892 ZC3H6P61129 1189 aaKnown RBP35.54■■■■□ 3.28
SEMA4A-209ENST00000462892 CPSF1Q10570 1443 aaKnown RBP35.53■■■■□ 3.28
SEMA4A-209ENST00000462892 CCDC9Q9Y3X0 531 aaKnown RBP35.52■■■■□ 3.28
SEMA4A-209ENST00000462892 CHRNA2Q15822 529 aa35.51■■■■□ 3.28
SEMA4A-209ENST00000462892 UPF1Q92900 1129 aaKnown RBP eCLIP35.51■■■■□ 3.28
SEMA4A-209ENST00000462892 NRAPQ86VF7 1730 aa35.51■■■■□ 3.27
SEMA4A-209ENST00000462892 AKAP12Q02952 1782 aa35.51■■■■□ 3.27
SEMA4A-209ENST00000462892 NRKQ7Z2Y5 1582 aa35.51■■■■□ 3.27
SEMA4A-209ENST00000462892 USP47Q96K76 1375 aa35.51■■■■□ 3.27
SEMA4A-209ENST00000462892 NLRP6P59044 892 aa35.5■■■■□ 3.27
SEMA4A-209ENST00000462892 TMC1Q8TDI8 760 aa35.5■■■■□ 3.27
SEMA4A-209ENST00000462892 PUS7Q96PZ0 661 aaKnown RBP35.5■■■■□ 3.27
SEMA4A-209ENST00000462892 TTC21BQ7Z4L5 1316 aa35.5■■■■□ 3.27
SEMA4A-209ENST00000462892 KTN1Q86UP2 1357 aaKnown RBP35.49■■■■□ 3.27
SEMA4A-209ENST00000462892 GCP02774 474 aa35.48■■■■□ 3.27
SEMA4A-209ENST00000462892 SLC12A5Q9H2X9 1139 aa35.47■■■■□ 3.27
SEMA4A-209ENST00000462892 SLC24A1O60721 1099 aa35.46■■■■□ 3.27
SEMA4A-209ENST00000462892 PIK3C2AO00443 1686 aa35.46■■■■□ 3.27
SEMA4A-209ENST00000462892 CD163L1Q9NR16 1453 aa35.45■■■■□ 3.27
SEMA4A-209ENST00000462892 CPDO75976 1380 aa35.44■■■■□ 3.26
SEMA4A-209ENST00000462892 TTC21AQ8NDW8 1320 aa35.44■■■■□ 3.26
SEMA4A-209ENST00000462892 SLIT3O75094 1523 aa35.41■■■■□ 3.26
SEMA4A-209ENST00000462892 MON2Q7Z3U7 1717 aa35.4■■■■□ 3.26
SEMA4A-209ENST00000462892 ONECUT3O60422 494 aaPredicted RBP35.4■■■■□ 3.26
SEMA4A-209ENST00000462892 HDGFL2Q7Z4V5 671 aaPredicted RBP35.4■■■■□ 3.26
SEMA4A-209ENST00000462892 SEPT12Q8IYM1 358 aa35.39■■■■□ 3.26
SEMA4A-209ENST00000462892 SPATA31A5Q5VU36 1347 aa35.37■■■■□ 3.25
SEMA4A-209ENST00000462892 SPATA31A7Q8IWB4 1347 aa35.37■■■■□ 3.25
SEMA4A-209ENST00000462892 TMF1P82094 1093 aa35.37■■■■□ 3.25
SEMA4A-209ENST00000462892 STRN4Q9NRL3 753 aa35.37■■■■□ 3.25
SEMA4A-209ENST00000462892 TERF2IPQ9NYB0 399 aa35.37■■■■□ 3.25
SEMA4A-209ENST00000462892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.36■■■■□ 3.25
SEMA4A-209ENST00000462892 CAMTA1Q9Y6Y1 1673 aa35.34■■■■□ 3.25
SEMA4A-209ENST00000462892 FAM98CQ17RN3 349 aaKnown RBP35.34■■■■□ 3.25
SEMA4A-209ENST00000462892 A0A1W2PP64 1363 aa35.34■■■■□ 3.25
SEMA4A-209ENST00000462892 LMO7Q8WWI1 1683 aa35.33■■■■□ 3.25
SEMA4A-209ENST00000462892 EVA1CP58658 441 aa35.33■■■■□ 3.25
SEMA4A-209ENST00000462892 NINLQ9Y2I6 1382 aa35.33■■■■□ 3.25
SEMA4A-209ENST00000462892 ZBTB7CA1YPR0 619 aa35.32■■■■□ 3.24
SEMA4A-209ENST00000462892 ZRANB1Q9UGI0 708 aa35.31■■■■□ 3.24
SEMA4A-209ENST00000462892 NME9Q86XW9 330 aa35.3■■■■□ 3.24
SEMA4A-209ENST00000462892 KCNH5Q8NCM2 988 aa35.3■■■■□ 3.24
SEMA4A-209ENST00000462892 EDC4Q6P2E9 1401 aaKnown RBP35.3■■■■□ 3.24
SEMA4A-209ENST00000462892 SPATA31A1Q5TZJ5 1347 aa35.3■■■■□ 3.24
SEMA4A-209ENST00000462892 A0A0G2JS52 829 aa35.29■■■■□ 3.24
SEMA4A-209ENST00000462892 MYT1Q01538 1121 aa35.29■■■■□ 3.24
SEMA4A-209ENST00000462892 USP31Q70CQ4 1352 aa35.28■■■■□ 3.24
SEMA4A-209ENST00000462892 SOX12O15370 315 aa35.28■■■■□ 3.24
SEMA4A-209ENST00000462892 BRWD3Q6RI45 1802 aa35.27■■■■□ 3.24
SEMA4A-209ENST00000462892 AATKQ6ZMQ8 1374 aa35.27■■■■□ 3.24
SEMA4A-209ENST00000462892 LARP1Q6PKG0 1096 aaKnown RBP35.26■■■■□ 3.24
SEMA4A-209ENST00000462892 CDCA8Q53HL2 280 aa35.24■■■■□ 3.23
SEMA4A-209ENST00000462892 KRT27Q7Z3Y8 459 aa35.24■■■■□ 3.23
SEMA4A-209ENST00000462892 ARHGEF25Q86VW2 580 aa35.24■■■■□ 3.23
SEMA4A-209ENST00000462892 COL5A2P05997 1499 aaPredicted RBP35.23■■■■□ 3.23
SEMA4A-209ENST00000462892 USP35Q9P2H5 1018 aa35.22■■■■□ 3.23
SEMA4A-209ENST00000462892 NFAT5O94916 1531 aa35.22■■■■□ 3.23
SEMA4A-209ENST00000462892 ANKRD36BQ8N2N9 1353 aa35.2■■■■□ 3.23
SEMA4A-209ENST00000462892 USP54Q70EL1 1684 aa35.2■■■■□ 3.23
SEMA4A-209ENST00000462892 COL18A1P39060 1754 aa35.19■■■■□ 3.22
SEMA4A-209ENST00000462892 AXIN2Q9Y2T1 843 aa35.19■■■■□ 3.22
SEMA4A-209ENST00000462892 THSD7AQ9UPZ6 1657 aa35.18■■■■□ 3.22
SEMA4A-209ENST00000462892 EP400Q96L91 3159 aa35.17■■■■□ 3.22
SEMA4A-209ENST00000462892 EIF4G2P78344 907 aaKnown RBP eCLIP35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms