RNA–Protein interactions for RNA: ENST00000462376.1

LYST-204, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-204ENST00000462376 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
LYST-204ENST00000462376 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
LYST-204ENST00000462376 AXIN1O15169 862 aa11.31□□□□□ -0.6
LYST-204ENST00000462376 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
LYST-204ENST00000462376 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
LYST-204ENST00000462376 LILRB3O75022 631 aa11.3□□□□□ -0.6
LYST-204ENST00000462376 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
LYST-204ENST00000462376 HPS1Q92902 700 aa11.28□□□□□ -0.6
LYST-204ENST00000462376 AVPP01185 164 aa11.27□□□□□ -0.61
LYST-204ENST00000462376 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
LYST-204ENST00000462376 AGERQ15109 404 aa11.25□□□□□ -0.61
LYST-204ENST00000462376 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
LYST-204ENST00000462376 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
LYST-204ENST00000462376 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
LYST-204ENST00000462376 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
LYST-204ENST00000462376 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
LYST-204ENST00000462376 SIAH2O43255 324 aa11.24□□□□□ -0.61
LYST-204ENST00000462376 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
LYST-204ENST00000462376 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
LYST-204ENST00000462376 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
LYST-204ENST00000462376 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
LYST-204ENST00000462376 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
LYST-204ENST00000462376 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
LYST-204ENST00000462376 CRIPAKQ8N1N5 446 aa11.22□□□□□ -0.61
LYST-204ENST00000462376 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
LYST-204ENST00000462376 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
LYST-204ENST00000462376 FBXO31Q5XUX0 539 aaPredicted RBP11.21□□□□□ -0.61
LYST-204ENST00000462376 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
LYST-204ENST00000462376 SH3D19Q5HYK7 790 aa11.2□□□□□ -0.62
LYST-204ENST00000462376 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
LYST-204ENST00000462376 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
LYST-204ENST00000462376 SMCPP49901 116 aaPredicted RBP11.19□□□□□ -0.62
LYST-204ENST00000462376 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
LYST-204ENST00000462376 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
LYST-204ENST00000462376 IL27Q8NEV9 243 aa11.18□□□□□ -0.62
LYST-204ENST00000462376 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
LYST-204ENST00000462376 ATP13A2Q9NQ11 1180 aa11.16□□□□□ -0.62
LYST-204ENST00000462376 AP1G2O75843 785 aa11.15□□□□□ -0.62
LYST-204ENST00000462376 FAM174AQ8TBP5 190 aa11.15□□□□□ -0.62
LYST-204ENST00000462376 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
LYST-204ENST00000462376 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
LYST-204ENST00000462376 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
LYST-204ENST00000462376 BPHLQ86WA6 291 aaPredicted RBP11.14□□□□□ -0.63
LYST-204ENST00000462376 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
LYST-204ENST00000462376 NNTQ13423 1086 aa11.13□□□□□ -0.63
LYST-204ENST00000462376 ARMC2Q8NEN0 867 aa11.13□□□□□ -0.63
LYST-204ENST00000462376 BMP1P13497 986 aa11.12□□□□□ -0.63
LYST-204ENST00000462376 CARD14Q9BXL6 1004 aa11.12□□□□□ -0.63
LYST-204ENST00000462376 NR6A1Q15406 480 aa11.11□□□□□ -0.63
LYST-204ENST00000462376 NBPF14Q5TI25 921 aa11.1□□□□□ -0.63
LYST-204ENST00000462376 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
LYST-204ENST00000462376 PCMTD1Q96MG8 357 aaPredicted RBP11.09□□□□□ -0.63
LYST-204ENST00000462376 ADH1CP00326 375 aa11.08□□□□□ -0.64
LYST-204ENST00000462376 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
LYST-204ENST00000462376 PPP2R2DQ66LE6 453 aa11.08□□□□□ -0.64
LYST-204ENST00000462376 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
LYST-204ENST00000462376 RFC5P40937 340 aa11.06□□□□□ -0.64
LYST-204ENST00000462376 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
LYST-204ENST00000462376 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
LYST-204ENST00000462376 MPNDQ8N594 471 aa11.05□□□□□ -0.64
LYST-204ENST00000462376 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
LYST-204ENST00000462376 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 TRIM47Q96LD4 638 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 CDK15Q96Q40 435 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
LYST-204ENST00000462376 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
LYST-204ENST00000462376 NR3C2P08235 984 aa11.03□□□□□ -0.64
LYST-204ENST00000462376 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
LYST-204ENST00000462376 ARHGAP9Q9BRR9 750 aa11.03□□□□□ -0.64
LYST-204ENST00000462376 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
LYST-204ENST00000462376 TIMP2P16035 220 aa11.02□□□□□ -0.65
LYST-204ENST00000462376 FSHRP23945 695 aa11.02□□□□□ -0.65
LYST-204ENST00000462376 GRM5P41594 1212 aa11.02□□□□□ -0.65
LYST-204ENST00000462376 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
LYST-204ENST00000462376 ZBTB33Q86T24 672 aa11.01□□□□□ -0.65
LYST-204ENST00000462376 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
LYST-204ENST00000462376 NR5A1Q13285 461 aa11□□□□□ -0.65
LYST-204ENST00000462376 ERFEQ4G0M1 354 aa11□□□□□ -0.65
LYST-204ENST00000462376 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
LYST-204ENST00000462376 ITPKCQ96DU7 683 aa11□□□□□ -0.65
LYST-204ENST00000462376 ZFP42Q96MM3 310 aa11□□□□□ -0.65
LYST-204ENST00000462376 PDXDC2PQ6P474 469 aa10.99□□□□□ -0.65
LYST-204ENST00000462376 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
LYST-204ENST00000462376 C1QTNF2Q9BXJ5 285 aa10.99□□□□□ -0.65
LYST-204ENST00000462376 MRPL14Q6P1L8 145 aaKnown RBP10.98□□□□□ -0.65
LYST-204ENST00000462376 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
LYST-204ENST00000462376 PTK2Q05397 1052 aa10.97□□□□□ -0.65
LYST-204ENST00000462376 C6orf118Q5T5N4 469 aa10.97□□□□□ -0.65
LYST-204ENST00000462376 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
LYST-204ENST00000462376 TREML4Q6UXN2 200 aa10.96□□□□□ -0.65
LYST-204ENST00000462376 SCARF1Q14162 830 aa10.95□□□□□ -0.66
LYST-204ENST00000462376 TRMT44Q8IYL2 757 aaKnown RBP10.95□□□□□ -0.66
LYST-204ENST00000462376 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
LYST-204ENST00000462376 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
LYST-204ENST00000462376 RAB15P59190 212 aa10.94□□□□□ -0.66
LYST-204ENST00000462376 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
LYST-204ENST00000462376 PNMA1Q8ND90 353 aa10.94□□□□□ -0.66
LYST-204ENST00000462376 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms