RNA–Protein interactions for RNA: ENST00000462340.1

SLC25A48-205, Transcript of solute carrier family 25 member 48, humanhuman

TSL 3

Gene SLC25A48, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A48-205ENST00000462340 CDK12Q9NYV4 1490 aaPredicted RBP27.23■■□□□ 1.95
SLC25A48-205ENST00000462340 PAK3O75914 559 aaPredicted RBP27.21■■□□□ 1.95
SLC25A48-205ENST00000462340 RBM6P78332 1123 aaKnown RBP27.21■■□□□ 1.95
SLC25A48-205ENST00000462340 TRPC5Q9UL62 973 aaPredicted RBP27.21■■□□□ 1.95
SLC25A48-205ENST00000462340 ATAD2Q6PL18 1390 aa27.21■■□□□ 1.95
SLC25A48-205ENST00000462340 ABCA3Q99758 1704 aa27.18■■□□□ 1.94
SLC25A48-205ENST00000462340 PUS7Q96PZ0 661 aaKnown RBP27.17■■□□□ 1.94
SLC25A48-205ENST00000462340 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
SLC25A48-205ENST00000462340 CABLES1Q8TDN4 633 aa27.16■■□□□ 1.94
SLC25A48-205ENST00000462340 ZNF692Q9BU19 519 aaPredicted RBP27.16■■□□□ 1.94
SLC25A48-205ENST00000462340 SLIT2O94813 1529 aa27.16■■□□□ 1.94
SLC25A48-205ENST00000462340 BCL9LQ86UU0 1499 aa27.15■■□□□ 1.94
SLC25A48-205ENST00000462340 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
SLC25A48-205ENST00000462340 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.15■■□□□ 1.94
SLC25A48-205ENST00000462340 ATRNO75882 1429 aa27.14■■□□□ 1.93
SLC25A48-205ENST00000462340 UNC5CLQ8IV45 518 aa27.13■■□□□ 1.93
SLC25A48-205ENST00000462340 NWD2Q9ULI1 1742 aa27.12■■□□□ 1.93
SLC25A48-205ENST00000462340 USP6P35125 1406 aa27.1■■□□□ 1.93
SLC25A48-205ENST00000462340 ABTB2Q8N961 1025 aa27.1■■□□□ 1.93
SLC25A48-205ENST00000462340 CRYBG1Q9Y4K1 1723 aa27.1■■□□□ 1.93
SLC25A48-205ENST00000462340 NLRP13Q86W25 1043 aa27.08■■□□□ 1.93
SLC25A48-205ENST00000462340 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
SLC25A48-205ENST00000462340 FAM83GA6ND36 823 aa27.06■■□□□ 1.92
SLC25A48-205ENST00000462340 GJD4Q96KN9 370 aaPredicted RBP27.06■■□□□ 1.92
SLC25A48-205ENST00000462340 TESK2Q96S53 571 aa27.06■■□□□ 1.92
SLC25A48-205ENST00000462340 COL14A1Q05707 1796 aaKnown RBP27.06■■□□□ 1.92
SLC25A48-205ENST00000462340 PLEKHG5O94827 1062 aa27.05■■□□□ 1.92
SLC25A48-205ENST00000462340 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
SLC25A48-205ENST00000462340 PLCH1Q4KWH8 1693 aa27.05■■□□□ 1.92
SLC25A48-205ENST00000462340 AKAP12Q02952 1782 aa27.04■■□□□ 1.92
SLC25A48-205ENST00000462340 USP47Q96K76 1375 aa27.04■■□□□ 1.92
SLC25A48-205ENST00000462340 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
SLC25A48-205ENST00000462340 USP19O94966 1318 aa27.03■■□□□ 1.92
SLC25A48-205ENST00000462340 VPS72Q15906 364 aa27.03■■□□□ 1.92
SLC25A48-205ENST00000462340 NINLQ9Y2I6 1382 aa27.03■■□□□ 1.92
SLC25A48-205ENST00000462340 PHRF1Q9P1Y6 1649 aaKnown RBP27.02■■□□□ 1.92
SLC25A48-205ENST00000462340 TTC21AQ8NDW8 1320 aa27.02■■□□□ 1.92
SLC25A48-205ENST00000462340 PRDM11Q9NQV5 511 aa27.02■■□□□ 1.92
SLC25A48-205ENST00000462340 RGS12O14924 1447 aa27.01■■□□□ 1.91
SLC25A48-205ENST00000462340 KTN1Q86UP2 1357 aaKnown RBP26.99■■□□□ 1.91
SLC25A48-205ENST00000462340 NUTM2GQ5VZR2 741 aa26.99■■□□□ 1.91
SLC25A48-205ENST00000462340 CPDO75976 1380 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 TTC21BQ7Z4L5 1316 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 TMF1P82094 1093 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 CDCA8Q53HL2 280 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 HDGFL2Q7Z4V5 671 aaPredicted RBP26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 BTG4Q9NY30 223 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 TERF2IPQ9NYB0 399 aa26.98■■□□□ 1.91
SLC25A48-205ENST00000462340 NLRP6P59044 892 aa26.97■■□□□ 1.91
SLC25A48-205ENST00000462340 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
SLC25A48-205ENST00000462340 GCP02774 474 aa26.96■■□□□ 1.91
SLC25A48-205ENST00000462340 TMC1Q8TDI8 760 aa26.96■■□□□ 1.91
SLC25A48-205ENST00000462340 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
SLC25A48-205ENST00000462340 NRAPQ86VF7 1730 aa26.96■■□□□ 1.91
SLC25A48-205ENST00000462340 NRKQ7Z2Y5 1582 aa26.95■■□□□ 1.9
SLC25A48-205ENST00000462340 ZC3H6P61129 1189 aaKnown RBP26.93■■□□□ 1.9
SLC25A48-205ENST00000462340 SLIT3O75094 1523 aa26.93■■□□□ 1.9
SLC25A48-205ENST00000462340 GLI3P10071 1580 aa26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 PIK3C2AO00443 1686 aa26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 ONECUT3O60422 494 aaPredicted RBP26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 KCNH5Q8NCM2 988 aa26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 SLC12A5Q9H2X9 1139 aa26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 CD163L1Q9NR16 1453 aa26.92■■□□□ 1.9
SLC25A48-205ENST00000462340 CCDC9Q9Y3X0 531 aaKnown RBP26.91■■□□□ 1.9
SLC25A48-205ENST00000462340 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
SLC25A48-205ENST00000462340 USP31Q70CQ4 1352 aa26.87■■□□□ 1.89
SLC25A48-205ENST00000462340 UPF1Q92900 1129 aaKnown RBP eCLIP26.87■■□□□ 1.89
SLC25A48-205ENST00000462340 A0A1W2PP64 1363 aa26.86■■□□□ 1.89
SLC25A48-205ENST00000462340 CHRNA2Q15822 529 aa26.86■■□□□ 1.89
SLC25A48-205ENST00000462340 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
SLC25A48-205ENST00000462340 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
SLC25A48-205ENST00000462340 USP54Q70EL1 1684 aa26.85■■□□□ 1.89
SLC25A48-205ENST00000462340 AATKQ6ZMQ8 1374 aa26.84■■□□□ 1.89
SLC25A48-205ENST00000462340 EVA1CP58658 441 aa26.84■■□□□ 1.89
SLC25A48-205ENST00000462340 LMO7Q8WWI1 1683 aa26.84■■□□□ 1.89
SLC25A48-205ENST00000462340 ANKRD36BQ8N2N9 1353 aa26.83■■□□□ 1.88
SLC25A48-205ENST00000462340 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
SLC25A48-205ENST00000462340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.82■■□□□ 1.88
SLC25A48-205ENST00000462340 SEPT12Q8IYM1 358 aa26.82■■□□□ 1.88
SLC25A48-205ENST00000462340 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
SLC25A48-205ENST00000462340 SPATA31A1Q5TZJ5 1347 aa26.8■■□□□ 1.88
SLC25A48-205ENST00000462340 ARHGEF25Q86VW2 580 aa26.79■■□□□ 1.88
SLC25A48-205ENST00000462340 STRN4Q9NRL3 753 aa26.79■■□□□ 1.88
SLC25A48-205ENST00000462340 CCDC125Q86Z20 511 aa26.78■■□□□ 1.88
SLC25A48-205ENST00000462340 ABCC6O95255 1503 aa26.78■■□□□ 1.88
SLC25A48-205ENST00000462340 FAM98CQ17RN3 349 aaKnown RBP26.76■■□□□ 1.87
SLC25A48-205ENST00000462340 NME9Q86XW9 330 aa26.76■■□□□ 1.87
SLC25A48-205ENST00000462340 THRAP3Q9Y2W1 955 aaKnown RBP26.76■■□□□ 1.87
SLC25A48-205ENST00000462340 NFAT5O94916 1531 aa26.75■■□□□ 1.87
SLC25A48-205ENST00000462340 COL5A2P05997 1499 aaPredicted RBP26.75■■□□□ 1.87
SLC25A48-205ENST00000462340 BRWD3Q6RI45 1802 aa26.75■■□□□ 1.87
SLC25A48-205ENST00000462340 BARGINQ6ZT62 677 aa26.75■■□□□ 1.87
SLC25A48-205ENST00000462340 COL18A1P39060 1754 aa26.74■■□□□ 1.87
SLC25A48-205ENST00000462340 KRT27Q7Z3Y8 459 aa26.74■■□□□ 1.87
SLC25A48-205ENST00000462340 A0A0G2JS52 829 aa26.72■■□□□ 1.87
SLC25A48-205ENST00000462340 MYT1Q01538 1121 aa26.72■■□□□ 1.87
SLC25A48-205ENST00000462340 LARP1Q6PKG0 1096 aaKnown RBP26.72■■□□□ 1.87
SLC25A48-205ENST00000462340 TCP11L2Q8N4U5 519 aa26.72■■□□□ 1.87
SLC25A48-205ENST00000462340 OVOS2A0A0J9YW53 1432 aa26.72■■□□□ 1.87
SLC25A48-205ENST00000462340 OVOS2Q6IE36 1432 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms