RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ANKRD26Q9UPS8 1709 aa26.91■■□□□ 1.9
PTPN18-207ENST00000462321 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
PTPN18-207ENST00000462321 ESCO1Q5FWF5 840 aa26.9■■□□□ 1.9
PTPN18-207ENST00000462321 GGNBP2Q9H3C7 697 aa26.9■■□□□ 1.9
PTPN18-207ENST00000462321 TTC21BQ7Z4L5 1316 aa26.89■■□□□ 1.9
PTPN18-207ENST00000462321 KIF1AQ12756 1690 aa26.87■■□□□ 1.89
PTPN18-207ENST00000462321 TTC21AQ8NDW8 1320 aa26.86■■□□□ 1.89
PTPN18-207ENST00000462321 ORAI2Q96SN7 254 aa26.85■■□□□ 1.89
PTPN18-207ENST00000462321 NME9Q86XW9 330 aa26.85■■□□□ 1.89
PTPN18-207ENST00000462321 LTBP4Q8N2S1 1624 aa26.85■■□□□ 1.89
PTPN18-207ENST00000462321 COG3Q96JB2 828 aa26.8■■□□□ 1.88
PTPN18-207ENST00000462321 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
PTPN18-207ENST00000462321 TNNT2P45379 298 aaPredicted RBP26.79■■□□□ 1.88
PTPN18-207ENST00000462321 OVOS2A0A0J9YW53 1432 aa26.79■■□□□ 1.88
PTPN18-207ENST00000462321 OVOS2Q6IE36 1432 aa26.79■■□□□ 1.88
PTPN18-207ENST00000462321 PSME1Q06323 249 aa26.77■■□□□ 1.88
PTPN18-207ENST00000462321 PNISRQ8TF01 805 aaKnown RBP26.77■■□□□ 1.88
PTPN18-207ENST00000462321 YTHDC1Q96MU7 727 aaKnown RBP26.77■■□□□ 1.88
PTPN18-207ENST00000462321 USP31Q70CQ4 1352 aa26.76■■□□□ 1.88
PTPN18-207ENST00000462321 FOXO3O43524 673 aa26.76■■□□□ 1.87
PTPN18-207ENST00000462321 ZRANB1Q9UGI0 708 aa26.76■■□□□ 1.87
PTPN18-207ENST00000462321 PIK3C2AO00443 1686 aa26.75■■□□□ 1.87
PTPN18-207ENST00000462321 AATKQ6ZMQ8 1374 aa26.74■■□□□ 1.87
PTPN18-207ENST00000462321 FAM9BQ8IZU0 186 aa26.73■■□□□ 1.87
PTPN18-207ENST00000462321 SLAIN2Q9P270 581 aa26.73■■□□□ 1.87
PTPN18-207ENST00000462321 USP54Q70EL1 1684 aa26.72■■□□□ 1.87
PTPN18-207ENST00000462321 MTHFSP49914 203 aa26.71■■□□□ 1.87
PTPN18-207ENST00000462321 NPHP3Q7Z494 1330 aa26.71■■□□□ 1.87
PTPN18-207ENST00000462321 PAK3O75914 559 aaPredicted RBP26.7■■□□□ 1.87
PTPN18-207ENST00000462321 BRINP3Q76B58 766 aa26.7■■□□□ 1.86
PTPN18-207ENST00000462321 TRPM3Q9HCF6 1732 aaPredicted RBP26.69■■□□□ 1.86
PTPN18-207ENST00000462321 KRT28Q7Z3Y7 464 aa26.69■■□□□ 1.86
PTPN18-207ENST00000462321 SMG6Q86US8 1419 aaKnown RBP26.68■■□□□ 1.86
PTPN18-207ENST00000462321 ABTB2Q8N961 1025 aa26.68■■□□□ 1.86
PTPN18-207ENST00000462321 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
PTPN18-207ENST00000462321 NLRP6P59044 892 aa26.66■■□□□ 1.86
PTPN18-207ENST00000462321 XPCQ01831 940 aaPredicted RBP26.66■■□□□ 1.86
PTPN18-207ENST00000462321 SBNO1A3KN83 1393 aa26.65■■□□□ 1.86
PTPN18-207ENST00000462321 INSRP06213 1382 aa26.65■■□□□ 1.86
PTPN18-207ENST00000462321 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
PTPN18-207ENST00000462321 PXDNQ92626 1479 aa26.64■■□□□ 1.86
PTPN18-207ENST00000462321 PNPLA6Q8IY17 1366 aa26.63■■□□□ 1.85
PTPN18-207ENST00000462321 MARF1Q9Y4F3 1742 aaKnown RBP26.63■■□□□ 1.85
PTPN18-207ENST00000462321 WDR43Q15061 677 aaKnown RBP eCLIP26.62■■□□□ 1.85
PTPN18-207ENST00000462321 COL3A1P02461 1466 aaPredicted RBP26.62■■□□□ 1.85
PTPN18-207ENST00000462321 CDK12Q9NYV4 1490 aaPredicted RBP26.62■■□□□ 1.85
PTPN18-207ENST00000462321 FBLN1P23142 703 aa26.62■■□□□ 1.85
PTPN18-207ENST00000462321 NUTM2GQ5VZR2 741 aa26.6■■□□□ 1.85
PTPN18-207ENST00000462321 DDX17Q92841 729 aaKnown RBP26.6■■□□□ 1.85
PTPN18-207ENST00000462321 ALS2Q96Q42 1657 aa26.6■■□□□ 1.85
PTPN18-207ENST00000462321 EMILIN1Q9Y6C2 1016 aa26.59■■□□□ 1.85
PTPN18-207ENST00000462321 TNS3Q68CZ2 1445 aa26.59■■□□□ 1.85
PTPN18-207ENST00000462321 SHPRHQ149N8 1683 aa26.58■■□□□ 1.85
PTPN18-207ENST00000462321 RRS1Q15050 365 aaKnown RBP26.58■■□□□ 1.85
PTPN18-207ENST00000462321 MAP2P11137 1827 aaKnown RBP26.57■■□□□ 1.84
PTPN18-207ENST00000462321 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
PTPN18-207ENST00000462321 SOS2Q07890 1332 aaPredicted RBP26.56■■□□□ 1.84
PTPN18-207ENST00000462321 HNRNPUQ00839 825 aaKnown RBP eCLIP26.56■■□□□ 1.84
PTPN18-207ENST00000462321 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
PTPN18-207ENST00000462321 NHSL1Q5SYE7 1610 aa26.56■■□□□ 1.84
PTPN18-207ENST00000462321 SLIT3O75094 1523 aa26.55■■□□□ 1.84
PTPN18-207ENST00000462321 USP19O94966 1318 aa26.55■■□□□ 1.84
PTPN18-207ENST00000462321 PPM1GO15355 546 aaPredicted RBP26.55■■□□□ 1.84
PTPN18-207ENST00000462321 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
PTPN18-207ENST00000462321 SPATA31A3Q5VYP0 1347 aa26.54■■□□□ 1.84
PTPN18-207ENST00000462321 NFAT5O94916 1531 aa26.54■■□□□ 1.84
PTPN18-207ENST00000462321 SOX12O15370 315 aa26.53■■□□□ 1.84
PTPN18-207ENST00000462321 LMOD2Q6P5Q4 547 aa26.53■■□□□ 1.84
PTPN18-207ENST00000462321 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
PTPN18-207ENST00000462321 ARHGEF10O15013 1369 aa26.53■■□□□ 1.84
PTPN18-207ENST00000462321 MAP3K19Q56UN5 1328 aa26.53■■□□□ 1.84
PTPN18-207ENST00000462321 DIAPH1O60610 1272 aaKnown RBP26.52■■□□□ 1.84
PTPN18-207ENST00000462321 NUDCQ9Y266 331 aa26.52■■□□□ 1.84
PTPN18-207ENST00000462321 KIF24Q5T7B8 1368 aa26.52■■□□□ 1.84
PTPN18-207ENST00000462321 ROBO1Q9Y6N7 1651 aa26.51■■□□□ 1.83
PTPN18-207ENST00000462321 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
PTPN18-207ENST00000462321 PEAK1Q9H792 1746 aa26.5■■□□□ 1.83
PTPN18-207ENST00000462321 FLT4P35916 1363 aa26.49■■□□□ 1.83
PTPN18-207ENST00000462321 MED1Q15648 1581 aaPredicted RBP26.48■■□□□ 1.83
PTPN18-207ENST00000462321 TOM1O60784 492 aa26.48■■□□□ 1.83
PTPN18-207ENST00000462321 AHDC1Q5TGY3 1603 aaPredicted RBP26.47■■□□□ 1.83
PTPN18-207ENST00000462321 RTL1A6NKG5 1358 aa26.47■■□□□ 1.83
PTPN18-207ENST00000462321 GCP02774 474 aa26.47■■□□□ 1.83
PTPN18-207ENST00000462321 AMPHP49418 695 aa26.45■■□□□ 1.83
PTPN18-207ENST00000462321 ZBED9Q6R2W3 1325 aa26.45■■□□□ 1.82
PTPN18-207ENST00000462321 IL13P35225 146 aa26.45■■□□□ 1.82
PTPN18-207ENST00000462321 U2AF1L5P0DN76 240 aaPredicted RBP26.44■■□□□ 1.82
PTPN18-207ENST00000462321 U2AF1Q01081 240 aaKnown RBP eCLIP26.44■■□□□ 1.82
PTPN18-207ENST00000462321 PHRF1Q9P1Y6 1649 aaKnown RBP26.43■■□□□ 1.82
PTPN18-207ENST00000462321 U2SURPO15042 1029 aaKnown RBP26.43■■□□□ 1.82
PTPN18-207ENST00000462321 HSP90AB2PQ58FF8 381 aa26.42■■□□□ 1.82
PTPN18-207ENST00000462321 HOXC9P31274 260 aa26.41■■□□□ 1.82
PTPN18-207ENST00000462321 CRYBG1Q9Y4K1 1723 aa26.41■■□□□ 1.82
PTPN18-207ENST00000462321 LTN1O94822 1766 aa26.4■■□□□ 1.82
PTPN18-207ENST00000462321 EIF4A2Q14240 407 aaKnown RBP26.4■■□□□ 1.82
PTPN18-207ENST00000462321 ARHGEF25Q86VW2 580 aa26.39■■□□□ 1.82
PTPN18-207ENST00000462321 CCDC146Q8IYE0 955 aa26.39■■□□□ 1.81
PTPN18-207ENST00000462321 CERKQ8TCT0 537 aa26.39■■□□□ 1.81
PTPN18-207ENST00000462321 UBAP1LF5GYI3 381 aa26.38■■□□□ 1.81
PTPN18-207ENST00000462321 IP6K1Q92551 441 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms