RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 PLEKHG3A1L390 1219 aa24.32■■□□□ 1.48
PPP2R1A-204ENST00000462047 NBPF1Q3BBV0 1214 aa24.32■■□□□ 1.48
PPP2R1A-204ENST00000462047 NBPF8Q3BBV2 869 aa24.32■■□□□ 1.48
PPP2R1A-204ENST00000462047 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
PPP2R1A-204ENST00000462047 FAM98CQ17RN3 349 aaKnown RBP24.3■■□□□ 1.48
PPP2R1A-204ENST00000462047 ATP7BP35670 1465 aa24.3■■□□□ 1.48
PPP2R1A-204ENST00000462047 PLCH1Q4KWH8 1693 aa24.3■■□□□ 1.48
PPP2R1A-204ENST00000462047 ACEP12821 1306 aa24.3■■□□□ 1.48
PPP2R1A-204ENST00000462047 ALS2Q96Q42 1657 aa24.29■■□□□ 1.48
PPP2R1A-204ENST00000462047 ARHGEF28Q8N1W1 1705 aaKnown RBP24.29■■□□□ 1.48
PPP2R1A-204ENST00000462047 ABCA3Q99758 1704 aa24.29■■□□□ 1.48
PPP2R1A-204ENST00000462047 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
PPP2R1A-204ENST00000462047 KIAA1210Q9ULL0 1709 aa24.27■■□□□ 1.48
PPP2R1A-204ENST00000462047 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
PPP2R1A-204ENST00000462047 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
PPP2R1A-204ENST00000462047 CENPJQ9HC77 1338 aaPredicted RBP24.27■■□□□ 1.48
PPP2R1A-204ENST00000462047 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
PPP2R1A-204ENST00000462047 COL14A1Q05707 1796 aaKnown RBP24.26■■□□□ 1.47
PPP2R1A-204ENST00000462047 ITSN1Q15811 1721 aa24.25■■□□□ 1.47
PPP2R1A-204ENST00000462047 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
PPP2R1A-204ENST00000462047 ABTB2Q8N961 1025 aa24.24■■□□□ 1.47
PPP2R1A-204ENST00000462047 ZC3H6P61129 1189 aaKnown RBP24.23■■□□□ 1.47
PPP2R1A-204ENST00000462047 NUTM2GQ5VZR2 741 aa24.23■■□□□ 1.47
PPP2R1A-204ENST00000462047 L3MBTL2Q969R5 705 aa24.23■■□□□ 1.47
PPP2R1A-204ENST00000462047 KIAA0232Q92628 1395 aa24.23■■□□□ 1.47
PPP2R1A-204ENST00000462047 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
PPP2R1A-204ENST00000462047 CHRNA2Q15822 529 aa24.21■■□□□ 1.47
PPP2R1A-204ENST00000462047 BAG6P46379 1132 aa24.2■■□□□ 1.46
PPP2R1A-204ENST00000462047 EVA1CP58658 441 aa24.2■■□□□ 1.46
PPP2R1A-204ENST00000462047 NLRP13Q86W25 1043 aa24.2■■□□□ 1.46
PPP2R1A-204ENST00000462047 SRCAPQ6ZRS2 3230 aa24.2■■□□□ 1.46
PPP2R1A-204ENST00000462047 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
PPP2R1A-204ENST00000462047 STRN4Q9NRL3 753 aa24.19■■□□□ 1.46
PPP2R1A-204ENST00000462047 BRD4O60885 1362 aaPredicted RBP24.18■■□□□ 1.46
PPP2R1A-204ENST00000462047 SPATA31A1Q5TZJ5 1347 aa24.18■■□□□ 1.46
PPP2R1A-204ENST00000462047 NRAPQ86VF7 1730 aa24.18■■□□□ 1.46
PPP2R1A-204ENST00000462047 PPIP5K1Q6PFW1 1433 aa24.16■■□□□ 1.46
PPP2R1A-204ENST00000462047 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
PPP2R1A-204ENST00000462047 SIN3AQ96ST3 1273 aa24.15■■□□□ 1.46
PPP2R1A-204ENST00000462047 CABP1Q9NZU7 370 aa24.15■■□□□ 1.46
PPP2R1A-204ENST00000462047 EVC2Q86UK5 1308 aa24.13■■□□□ 1.45
PPP2R1A-204ENST00000462047 CRYBG1Q9Y4K1 1723 aa24.13■■□□□ 1.45
PPP2R1A-204ENST00000462047 GCP02774 474 aa24.13■■□□□ 1.45
PPP2R1A-204ENST00000462047 CPDO75976 1380 aa24.13■■□□□ 1.45
PPP2R1A-204ENST00000462047 USP19O94966 1318 aa24.12■■□□□ 1.45
PPP2R1A-204ENST00000462047 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
PPP2R1A-204ENST00000462047 FAM196AQ6ZSG2 479 aa24.12■■□□□ 1.45
PPP2R1A-204ENST00000462047 FAM182BQ5T319 152 aa24.11■■□□□ 1.45
PPP2R1A-204ENST00000462047 BARGINQ6ZT62 677 aa24.11■■□□□ 1.45
PPP2R1A-204ENST00000462047 USP35Q9P2H5 1018 aa24.11■■□□□ 1.45
PPP2R1A-204ENST00000462047 NLRP6P59044 892 aa24.09■■□□□ 1.45
PPP2R1A-204ENST00000462047 PDE3BQ13370 1112 aa24.09■■□□□ 1.45
PPP2R1A-204ENST00000462047 TCP11L2Q8N4U5 519 aa24.08■■□□□ 1.45
PPP2R1A-204ENST00000462047 ZNF692Q9BU19 519 aaPredicted RBP24.08■■□□□ 1.45
PPP2R1A-204ENST00000462047 ROCK2O75116 1388 aaKnown RBP24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 EN1Q05925 392 aaPredicted RBP24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 LARP1Q6PKG0 1096 aaKnown RBP24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 THRAP3Q9Y2W1 955 aaKnown RBP24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 SSH2Q76I76 1423 aa24.07■■□□□ 1.44
PPP2R1A-204ENST00000462047 THSD7AQ9UPZ6 1657 aa24.05■■□□□ 1.44
PPP2R1A-204ENST00000462047 USP6P35125 1406 aa24.04■■□□□ 1.44
PPP2R1A-204ENST00000462047 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
PPP2R1A-204ENST00000462047 QRICH2Q9H0J4 1663 aa24.02■■□□□ 1.44
PPP2R1A-204ENST00000462047 TRIM37O94972 964 aa24.02■■□□□ 1.44
PPP2R1A-204ENST00000462047 NRKQ7Z2Y5 1582 aa24.01■■□□□ 1.43
PPP2R1A-204ENST00000462047 ZBTB7CA1YPR0 619 aa24.01■■□□□ 1.43
PPP2R1A-204ENST00000462047 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
PPP2R1A-204ENST00000462047 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
PPP2R1A-204ENST00000462047 DISP2A7MBM2 1401 aa24■■□□□ 1.43
PPP2R1A-204ENST00000462047 PSDA5PKW4 1024 aaPredicted RBP23.99■■□□□ 1.43
PPP2R1A-204ENST00000462047 APBA3O96018 575 aa23.99■■□□□ 1.43
PPP2R1A-204ENST00000462047 KCNH5Q8NCM2 988 aa23.98■■□□□ 1.43
PPP2R1A-204ENST00000462047 RGPD1P0DJD0 1748 aa23.98■■□□□ 1.43
PPP2R1A-204ENST00000462047 TTC21BQ7Z4L5 1316 aa23.97■■□□□ 1.43
PPP2R1A-204ENST00000462047 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
PPP2R1A-204ENST00000462047 CAMKK2Q96RR4 588 aa23.97■■□□□ 1.43
PPP2R1A-204ENST00000462047 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
PPP2R1A-204ENST00000462047 EZH2Q15910 746 aaKnown RBP23.96■■□□□ 1.43
PPP2R1A-204ENST00000462047 CRB1P82279 1406 aa23.95■■□□□ 1.42
PPP2R1A-204ENST00000462047 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.42
PPP2R1A-204ENST00000462047 LMO7Q8WWI1 1683 aa23.95■■□□□ 1.42
PPP2R1A-204ENST00000462047 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
PPP2R1A-204ENST00000462047 TOM1L2Q6ZVM7 507 aa23.94■■□□□ 1.42
PPP2R1A-204ENST00000462047 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
PPP2R1A-204ENST00000462047 R3HDM1Q15032 1099 aaKnown RBP23.93■■□□□ 1.42
PPP2R1A-204ENST00000462047 ARHGEF25Q86VW2 580 aa23.92■■□□□ 1.42
PPP2R1A-204ENST00000462047 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
PPP2R1A-204ENST00000462047 SLIT3O75094 1523 aa23.91■■□□□ 1.42
PPP2R1A-204ENST00000462047 CDCA7Q9BWT1 371 aaPredicted RBP23.91■■□□□ 1.42
PPP2R1A-204ENST00000462047 SBNO2Q9Y2G9 1366 aa23.91■■□□□ 1.42
PPP2R1A-204ENST00000462047 DDB1Q16531 1140 aa23.89■■□□□ 1.41
PPP2R1A-204ENST00000462047 NBPF14Q5TI25 921 aa23.89■■□□□ 1.41
PPP2R1A-204ENST00000462047 AXIN2Q9Y2T1 843 aa23.89■■□□□ 1.41
PPP2R1A-204ENST00000462047 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.41
PPP2R1A-204ENST00000462047 TONSLQ96HA7 1378 aa23.89■■□□□ 1.41
PPP2R1A-204ENST00000462047 WDR17Q8IZU2 1322 aa23.88■■□□□ 1.41
PPP2R1A-204ENST00000462047 SOX12O15370 315 aa23.87■■□□□ 1.41
PPP2R1A-204ENST00000462047 CSB-PGBD3P0DP91 1061 aa23.87■■□□□ 1.41
PPP2R1A-204ENST00000462047 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms