RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
GTF3C5-208ENST00000461871 HNRNPUQ00839 825 aaKnown RBP eCLIP18.86■□□□□ 0.61
GTF3C5-208ENST00000461871 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 COG3Q96JB2 828 aa18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
GTF3C5-208ENST00000461871 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
GTF3C5-208ENST00000461871 MTHFSP49914 203 aa18.84■□□□□ 0.61
GTF3C5-208ENST00000461871 TMEM94Q12767 1356 aa18.83■□□□□ 0.61
GTF3C5-208ENST00000461871 ATF3P18847 181 aa18.83■□□□□ 0.6
GTF3C5-208ENST00000461871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.83■□□□□ 0.6
GTF3C5-208ENST00000461871 PNPLA6Q8IY17 1366 aa18.82■□□□□ 0.6
GTF3C5-208ENST00000461871 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
GTF3C5-208ENST00000461871 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
GTF3C5-208ENST00000461871 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
GTF3C5-208ENST00000461871 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
GTF3C5-208ENST00000461871 NUDCQ9Y266 331 aa18.8■□□□□ 0.6
GTF3C5-208ENST00000461871 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
GTF3C5-208ENST00000461871 MSH6P52701 1360 aa18.8■□□□□ 0.6
GTF3C5-208ENST00000461871 NME9Q86XW9 330 aa18.79■□□□□ 0.6
GTF3C5-208ENST00000461871 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
GTF3C5-208ENST00000461871 BLMP54132 1417 aaPredicted RBP18.79■□□□□ 0.6
GTF3C5-208ENST00000461871 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
GTF3C5-208ENST00000461871 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
GTF3C5-208ENST00000461871 C1orf167Q5SNV9 1468 aa18.77■□□□□ 0.6
GTF3C5-208ENST00000461871 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
GTF3C5-208ENST00000461871 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
GTF3C5-208ENST00000461871 SMG6Q86US8 1419 aaKnown RBP18.77■□□□□ 0.6
GTF3C5-208ENST00000461871 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
GTF3C5-208ENST00000461871 LRRC7Q96NW7 1537 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 PSME1Q06323 249 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 POLKQ9UBT6 870 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
GTF3C5-208ENST00000461871 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
GTF3C5-208ENST00000461871 USP54Q70EL1 1684 aa18.74■□□□□ 0.59
GTF3C5-208ENST00000461871 MST1RQ04912 1400 aa18.74■□□□□ 0.59
GTF3C5-208ENST00000461871 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
GTF3C5-208ENST00000461871 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
GTF3C5-208ENST00000461871 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
GTF3C5-208ENST00000461871 MAP2P11137 1827 aaKnown RBP18.71■□□□□ 0.59
GTF3C5-208ENST00000461871 ZNF335Q9H4Z2 1342 aaPredicted RBP18.7■□□□□ 0.58
GTF3C5-208ENST00000461871 NLRP6P59044 892 aa18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 ABTB2Q8N961 1025 aa18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 ORAI2Q96SN7 254 aa18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
GTF3C5-208ENST00000461871 MED1Q15648 1581 aaPredicted RBP18.68■□□□□ 0.58
GTF3C5-208ENST00000461871 FCHSD2O94868 740 aa18.68■□□□□ 0.58
GTF3C5-208ENST00000461871 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
GTF3C5-208ENST00000461871 SBNO1A3KN83 1393 aa18.68■□□□□ 0.58
GTF3C5-208ENST00000461871 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
GTF3C5-208ENST00000461871 IQSEC2Q5JU85 1478 aa18.67■□□□□ 0.58
GTF3C5-208ENST00000461871 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
GTF3C5-208ENST00000461871 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
GTF3C5-208ENST00000461871 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
GTF3C5-208ENST00000461871 FOXO3O43524 673 aa18.66■□□□□ 0.58
GTF3C5-208ENST00000461871 LTBP4Q8N2S1 1624 aa18.66■□□□□ 0.58
GTF3C5-208ENST00000461871 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
GTF3C5-208ENST00000461871 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
GTF3C5-208ENST00000461871 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
GTF3C5-208ENST00000461871 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
GTF3C5-208ENST00000461871 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
GTF3C5-208ENST00000461871 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
GTF3C5-208ENST00000461871 IL13P35225 146 aa18.62■□□□□ 0.57
GTF3C5-208ENST00000461871 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
GTF3C5-208ENST00000461871 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
GTF3C5-208ENST00000461871 FLT4P35916 1363 aa18.61■□□□□ 0.57
GTF3C5-208ENST00000461871 ZNF521Q96K83 1311 aa18.6■□□□□ 0.57
GTF3C5-208ENST00000461871 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
GTF3C5-208ENST00000461871 NEFMP07197 916 aa18.6■□□□□ 0.57
GTF3C5-208ENST00000461871 TRPM3Q9HCF6 1732 aaPredicted RBP18.6■□□□□ 0.57
GTF3C5-208ENST00000461871 USP19O94966 1318 aa18.59■□□□□ 0.57
GTF3C5-208ENST00000461871 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
GTF3C5-208ENST00000461871 APAF1O14727 1248 aa18.59■□□□□ 0.57
GTF3C5-208ENST00000461871 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
GTF3C5-208ENST00000461871 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
GTF3C5-208ENST00000461871 ARHGEF10O15013 1369 aa18.58■□□□□ 0.57
GTF3C5-208ENST00000461871 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.56
GTF3C5-208ENST00000461871 AMPHP49418 695 aa18.58■□□□□ 0.56
GTF3C5-208ENST00000461871 BRINP3Q76B58 766 aa18.58■□□□□ 0.56
GTF3C5-208ENST00000461871 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
GTF3C5-208ENST00000461871 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
GTF3C5-208ENST00000461871 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
GTF3C5-208ENST00000461871 SLIT3O75094 1523 aa18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 GCP02774 474 aa18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 FBLN1P23142 703 aa18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 IP6K1Q92551 441 aa18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 MARF1Q9Y4F3 1742 aaKnown RBP18.56■□□□□ 0.56
GTF3C5-208ENST00000461871 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
GTF3C5-208ENST00000461871 SPATA31A3Q5VYP0 1347 aa18.55■□□□□ 0.56
GTF3C5-208ENST00000461871 PHRF1Q9P1Y6 1649 aaKnown RBP18.55■□□□□ 0.56
GTF3C5-208ENST00000461871 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
GTF3C5-208ENST00000461871 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
GTF3C5-208ENST00000461871 PXDNQ92626 1479 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms