RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 USB1Q9BQ65 265 aaKnown RBP6□□□□□ -1.45
HDAC6-212ENST00000461608 MS4A1P11836 297 aa5.99□□□□□ -1.45
HDAC6-212ENST00000461608 VEGFBP49765 207 aa5.99□□□□□ -1.45
HDAC6-212ENST00000461608 TMEM151AQ8N4L1 468 aa5.99□□□□□ -1.45
HDAC6-212ENST00000461608 PCDHGC3Q9UN70 934 aa5.99□□□□□ -1.45
HDAC6-212ENST00000461608 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
HDAC6-212ENST00000461608 KCTD17Q8N5Z5 321 aa5.98□□□□□ -1.45
HDAC6-212ENST00000461608 EHBP1Q8NDI1 1231 aa5.98□□□□□ -1.45
HDAC6-212ENST00000461608 SSTR3P32745 418 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-212ENST00000461608 KCNMA1Q12791 1236 aa5.97□□□□□ -1.45
HDAC6-212ENST00000461608 PTCRAQ6ISU1 281 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-212ENST00000461608 GDF11O95390 407 aa5.96□□□□□ -1.46
HDAC6-212ENST00000461608 BMP1P13497 986 aa5.96□□□□□ -1.46
HDAC6-212ENST00000461608 USP46P62068 366 aa5.96□□□□□ -1.46
HDAC6-212ENST00000461608 JUNDP17535 347 aa5.95□□□□□ -1.46
HDAC6-212ENST00000461608 SKIV2LQ15477 1246 aaKnown RBP5.95□□□□□ -1.46
HDAC6-212ENST00000461608 ARXQ96QS3 562 aa5.95□□□□□ -1.46
HDAC6-212ENST00000461608 NDUFV2P19404 249 aa5.94□□□□□ -1.46
HDAC6-212ENST00000461608 BEGAINQ9BUH8 593 aa5.94□□□□□ -1.46
HDAC6-212ENST00000461608 SPIRE2Q8WWL2 714 aa5.93□□□□□ -1.46
HDAC6-212ENST00000461608 MOXD2PA6NHM9 499 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 FDX1P10109 184 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 ZFP42Q96MM3 310 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 ZMYND15Q9H091 742 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 ERBB4Q15303 1308 aa5.92□□□□□ -1.46
HDAC6-212ENST00000461608 SIAH2O43255 324 aa5.91□□□□□ -1.46
HDAC6-212ENST00000461608 IGHA1P01876 353 aa5.91□□□□□ -1.46
HDAC6-212ENST00000461608 CLK2P49760 499 aaKnown RBP5.91□□□□□ -1.46
HDAC6-212ENST00000461608 NUTM1Q86Y26 1132 aa5.91□□□□□ -1.46
HDAC6-212ENST00000461608 NUDT12Q9BQG2 462 aa5.91□□□□□ -1.46
HDAC6-212ENST00000461608 MAN1A2O60476 641 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 UPP2O95045 317 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-212ENST00000461608 GJA5P36382 358 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 RASSF7Q02833 373 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 TUSC1Q2TAM9 212 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 TRIM46Q7Z4K8 759 aa5.9□□□□□ -1.46
HDAC6-212ENST00000461608 C6orf229H3BNL8 230 aa5.89□□□□□ -1.47
HDAC6-212ENST00000461608 SH3BP2P78314 561 aa5.89□□□□□ -1.47
HDAC6-212ENST00000461608 LINC01559Q495D7 138 aa5.89□□□□□ -1.47
HDAC6-212ENST00000461608 MYSM1Q5VVJ2 828 aa5.89□□□□□ -1.47
HDAC6-212ENST00000461608 MRPL14Q6P1L8 145 aaKnown RBP5.89□□□□□ -1.47
HDAC6-212ENST00000461608 APBB1O00213 710 aa5.88□□□□□ -1.47
HDAC6-212ENST00000461608 PURBQ96QR8 312 aaKnown RBP5.88□□□□□ -1.47
HDAC6-212ENST00000461608 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.88□□□□□ -1.47
HDAC6-212ENST00000461608 TBC1D2Q9BYX2 928 aa5.88□□□□□ -1.47
HDAC6-212ENST00000461608 SOCS7O14512 581 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 CCNYL3P0C7X3 344 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 FOXK2Q01167 660 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 MCM6Q14566 821 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 PRR7Q8TB68 274 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 ATP1B4Q9UN42 357 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-212ENST00000461608 PCDHB15Q9Y5E8 787 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 TLL2Q9Y6L7 1015 aa5.87□□□□□ -1.47
HDAC6-212ENST00000461608 SPDYE5A6NIY4 337 aa5.86□□□□□ -1.47
HDAC6-212ENST00000461608 A6NJR5 290 aa5.86□□□□□ -1.47
HDAC6-212ENST00000461608 UBTFP17480 764 aaKnown RBP5.86□□□□□ -1.47
HDAC6-212ENST00000461608 HOMEZQ8IX15 550 aa5.86□□□□□ -1.47
HDAC6-212ENST00000461608 BANK1Q8NDB2 785 aa5.86□□□□□ -1.47
HDAC6-212ENST00000461608 UNC93B1Q9H1C4 597 aa5.86□□□□□ -1.47
HDAC6-212ENST00000461608 CFAP99D6REC4 459 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 ADH1CP00326 375 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 MARSP56192 900 aaKnown RBP5.85□□□□□ -1.47
HDAC6-212ENST00000461608 PTPRNQ16849 979 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 TMEM259Q4ZIN3 620 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 PPP2R2DQ66LE6 453 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 BAP1Q92560 729 aa5.85□□□□□ -1.47
HDAC6-212ENST00000461608 SPTLC1O15269 473 aa5.84□□□□□ -1.47
HDAC6-212ENST00000461608 WDR4P57081 412 aaKnown RBP5.84□□□□□ -1.47
HDAC6-212ENST00000461608 NNTQ13423 1086 aa5.84□□□□□ -1.47
HDAC6-212ENST00000461608 PRPF38BQ5VTL8 546 aaKnown RBP5.84□□□□□ -1.47
HDAC6-212ENST00000461608 RSBN1LQ6PCB5 846 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-212ENST00000461608 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
HDAC6-212ENST00000461608 EVA1BQ9NVM1 165 aa5.84□□□□□ -1.47
HDAC6-212ENST00000461608 POLR3EQ9NVU0 708 aa5.84□□□□□ -1.47
HDAC6-212ENST00000461608 DNMT3AQ9Y6K1 912 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-212ENST00000461608 RAD21O60216 631 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 VARSP26640 1264 aaKnown RBP5.83□□□□□ -1.48
HDAC6-212ENST00000461608 KCNH2Q12809 1159 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 MTMR2Q13614 643 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 KANK3Q6NY19 840 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 RIC3Q7Z5B4 369 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 CABLES1Q8TDN4 633 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 MAP10Q9P2G4 905 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 ADAMTS8Q9UP79 889 aa5.83□□□□□ -1.48
HDAC6-212ENST00000461608 SUPT5HO00267 1087 aaKnown RBP5.82□□□□□ -1.48
HDAC6-212ENST00000461608 PER1O15534 1290 aaPredicted RBP5.82□□□□□ -1.48
HDAC6-212ENST00000461608 RFC5P40937 340 aa5.82□□□□□ -1.48
HDAC6-212ENST00000461608 ZNF511Q8NB15 262 aa5.82□□□□□ -1.48
HDAC6-212ENST00000461608 SCARF2Q96GP6 870 aaPredicted RBP5.82□□□□□ -1.48
HDAC6-212ENST00000461608 PRM3Q9NNZ6 103 aa5.82□□□□□ -1.48
HDAC6-212ENST00000461608 F12P00748 615 aaPredicted RBP5.81□□□□□ -1.48
HDAC6-212ENST00000461608 BMP2P12643 396 aa5.81□□□□□ -1.48
HDAC6-212ENST00000461608 HRCP23327 699 aa5.81□□□□□ -1.48
HDAC6-212ENST00000461608 C6orf118Q5T5N4 469 aa5.81□□□□□ -1.48
HDAC6-212ENST00000461608 WWC1Q8IX03 1113 aa5.81□□□□□ -1.48
HDAC6-212ENST00000461608 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms